Previous Contig 001594:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF015H01Sequence598001594 (2)gb:AB024034_15158177e-31Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MDC11.>gb:AY087770_157680009912 (2)gb:AB024034_15158179e-31Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MDC11.>gb:AY087770_157
JMFF036I06Sequence571001594 (2)gb:AB024034_15158179e-30Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MDC11.>gb:AY087770_157712009912 (2)gb:AB024034_15158172e-33Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MDC11.>gb:AY087770_157

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF015H01+ AATCGCCCACTTCGATACTAGGAGCCCCTGACAGTGGATTTACGGTGGCATCG
                      ____________________________________________________________
consensus AATCGCCCACTTCGATACTAGGAGCCCCTGACAGTGGATTTACGGTGGCATCG
 
. : . : . : . : . : . :
JMFF015H01+ CCATCAATAGGATGTCCGGTTTCTAAGACACTGAAAGTTTTGTCAGTAGGATCGGGGACA
JMFF036I06+ ACTGAAAGTTTTGTCAGTAGGATCGGGGACA
                      ____________________________________________________________
consensus CCATCAATAGGATGTCCGGTTTCTAAGACACTGAAAGTTTTGTCAGTAGGATCGGGGACA
 
. : . : . : . : . : . :
JMFF015H01+ GATGAAGGCTCTTCCTTGCGGAAGTAATAGACCTGCTCAAAGTGATAGAGCATGGAGAGG
JMFF036I06+ GATGAAGGCTCTTCCTTGCGGAAGTAATAGACCTGCTCAAAGTGATAGAGCATGGAGAGG
                      ____________________________________________________________
consensus GATGAAGGCTCTTCCTTGCGGAAGTAATAGACCTGCTCAAAGTGATAGAGCATGGAGAGG
 
. : . : . : . : . : . :
JMFF015H01+ TAGTACTTTCTTAAGATGAATGATGCACTTGTTACATAGGATGGAAAAGTGAATGCCCCA
JMFF036I06+ TAGTACTTTCTTAAGATGAATGATGCACTTGTTACATAGGATGGAAAAGTGAATGCCCCA
                      ____________________________________________________________
consensus TAGTACTTTCTTAAGATGAATGATGCACTTGTTACATAGGATGGAAAAGTGAATGCCCCA
 
. : . : . : . : . : . :
JMFF015H01+ ATCACATCTTCCCATCTTCGATCTCTAATAACCTTTTCTATTCCACCTCGCGAAGTAACC
JMFF036I06+ ATCACATCTTCCCATCTTCGATCTCTAATAACCTTTTCTATTCCACCTCGCGAAGTAACC
                      ____________________________________________________________
consensus ATCACATCTTCCCATCTTCGATCTCTAATAACCTTTTCTATTCCACCTCGCGAAGTAACC
 
. : . : . : . : . : . :
JMFF015H01+ TCCACAAAAAGACGATGTAGATCTAGAGGCTTTCCTGCTACAGTAGGAACCAAGTATTTG
JMFF036I06+ TCCACAAAAAGACGATGTAGATCTAGAGGCTTTCCTGCTACAGTAGGAACCAAGTATTTG
                      ____________________________________________________________
consensus TCCACAAAAAGACGATGTAGATCTAGAGGCTTTCCTGCTACAGTAGGAACCAAGTATTTG
 
. : . : . : . : . : . :
JMFF015H01+ GCAGCCAAAGAAACATGGAAAGCTTGAAGCATTTGCCAGAAAAGCTGTGGGTCTCGAACA
JMFF036I06+ GCAGCCAAAGAAACATGGAAAGCTTGAAGCATTTGCCAGAAAAGCTGTGGGTCTCGAACA
                      ____________________________________________________________
consensus GCAGCCAAAGAAACATGGAAAGCTTGAAGCATTTGCCAGAAAAGCTGTGGGTCTCGAACA
 
. : . : . : . : . : . :
JMFF015H01+ ATTTCCTGAAACTCAGCTTGGGGCTTAGGGTAAGAGAGCGGGCGCTTGGATTGACCCGAA
JMFF036I06+ ATTTCCTGAAACTCAGCTTGGGGCTTAGGGTAAGAGAGCGGGCGCTTGGATTGACCCGAA
                      ____________________________________________________________
consensus ATTTCCTGAAACTCAGCTTGGGGCTTAGGGTAAGAGAGCGGGCGCTTGGATTGACCCGAA
 
. : . : . : . : . : . :
JMFF015H01+ GAGGGAGCAGTGAGAGGCGTTCCCGTGGGTGAAGGGTTAGATGACATTTTTGTTGCCGAT
JMFF036I06+ GAGGGAGCAGTGAGAGGCGTTCCCGTGGGTGAAGGGTTAGATGACATTTTTGTTGCCGAT
                      ____________________________________________________________
consensus GAGGGAGCAGTGAGAGGCGTTCCCGTGGGTGAAGGGTTAGATGACATTTTTGTTGCCGAT
 
. : . : . : . : . : . :
JMFF015H01+ AATTATACTCCCTAATTGTTTGCAGTATGAACTCGTAAACCTCCCATTCCCTCTGCTCCT
JMFF036I06+ AATTATACTCCCTAATTGTTTGCAGTATGAACTCGTAAACCTCCCATTCCCTCTGCTCCT
                      ____________________________________________________________
consensus AATTATACTCCCTAATTGTTTGCAGTATGAACTCGTAAACCTCCCATTCCCTCTGCTCCT
 
. : . : . : . : . : . :
JMFF015H01+ ACGGC
JMFF036I06+ ACGGCACAGCGATGAAGTATCAAATTTTTTCTTAGTAATCAATGTCTGCCCACAAATTAT
                      ____________________________________________________________
consensus ACGGCACAGCGATGAAGTATCAAATTTTTTCTTAGTAATCAATGTCTGCCCACAAATTAT