Previous Contig 001487:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF033D05Sequence555001487 (2)758010118 (2)pir|T45868|T458688e-23hypothetical protein F3A4.230 - Arabidopsis thaliana>gb:ATF3A4_1550569 Arabidops
JMFF041E04Sequence644001487 (2)620010118 (2)pir|T04647|T046471e-20hypothetical protein F10N7.210 - Arabidopsis thaliana>gb:ATCHRIV76_1547119 Arabi

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF041E04+ TAGCCTTGTACTTTTGGGTCTTGAATTCGTACTTGGGGCCAATG
                      ____________________________________________________________
consensus TAGCCTTGTACTTTTGGGTCTTGAATTCGTACTTGGGGCCAATG
 
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JMFF041E04+ GATACCAAAGTTGGTTTAAGATTGTCACCACTTGATNTGCCCTCCTTTCTAATATCACTT
JMFF033D05+ TAATATCACTT
                      ____________________________________________________________
consensus GATACCAAAGTTGGTTTAAGATTGTCACCACTTGATNTGCCCTCCTTTCTAATATCACTT
 
. : . : . : . : . : . :
JMFF041E04+ CCTCCGTTGTGAGTTTGACAAGTTAAACAACTTGTGTTCAATGCCTTATCTTGTGAACCT
JMFF033D05+ CCTCCGTTGTGAGTTNGACAAGTTAAACAACTTGTGTTCAATGCCTTATCTTGTGAACCT
                      ____________________________________________________________
consensus CCTCCGTTGTGAGTTTGACAAGTTAAACAACTTGTGTTCAATGCCTTATCTTGTGAACCT
 
. : . : . : . : . : . :
JMFF041E04+ TGCCTCTCCTTTCCATGATTACTTCGCCCGCTCTGAGTTTGATCACTTGAATTATCTATG
JMFF033D05+ GGCCTCTCCTTTCCATGATTACTTCGCCCGCTCTGAGTTTGATCACTTGAATTATCTATG
                      ____________________________________________________________
consensus TGCCTCTCCTTTCCATGATTACTTCGCCCGCTCTGAGTTTGATCACTTGAATTATCTATG
 
. : . : . : . : . : . :
JMFF041E04+ TTCAAAACATGATCTTGTGGACCAGCTTGTTTCTCCTTTCTAATATCACTTCCTCTGTTG
JMFF033D05+ TTCAAAACATGATCTTGTGGACCAGCTTGTTTCTCCTTTCTAATATCACTTCCTCTGTTG
                      ____________________________________________________________
consensus TTCAAAACATGATCTTGTGGACCAGCTTGTTTCTCCTTTCTAATATCACTTCCTCTGTTG
 
. : . : . : . : . : . :
JMFF041E04+ TGAGTTTGACAAGTTAAACAACTTGTGTTCAATGCCTTATCTTGTGAACCTTGCCTCTCC
JMFF033D05+ TGAGTTTGACAAGTTAAACAACTTGTGTTCAATGCCTTATCTTGTGAACCTTGCCTCTCC
                      ____________________________________________________________
consensus TGAGTTTGACAAGTTAAACAACTTGTGTTCAATGCCTTATCTTGTGAACCTTGCCTCTCC
 
. : . : . : . : . : . :
JMFF041E04+ TTTCCATGATTACTTCGCCCGCTCTAATCACTTGAATTATCTATGTTCAAAACATGATCT
JMFF033D05+ TTTCCATGATTACTTCGCCCGCTCTAATCACTTGAATTATCTATGTTCAAAACATGATCT
                      ____________________________________________________________
consensus TTTCCATGATTACTTCGCCCGCTCTAATCACTTGAATTATCTATGTTCAAAACATGATCT
 
. : . : . : . : . : . :
JMFF041E04+ TGTGGACCAGCTTGTTTCTCCTTTCCATTATCAGCTCTCCGTTGATGGAGCAAAGGGACC
JMFF033D05+ TGTGGACCAGCTTGTTTCTCCTTTCCATTATCAGCTCTCCGTTGATGGAGCAAAGGGACC
                      ____________________________________________________________
consensus TGTGGACCAGCTTGTTTCTCCTTTCCATTATCAGCTCTCCGTTGATGGAGCAAAGGGACC
 
. : . : . : . : . : . :
JMFF041E04+ GACAGGTCATTTCTTGTAGCAATGTTTGAATAATTGAGCGCCATCCAACCTTTATTTTTC
JMFF033D05+ GACAGGTCATTTCTTGTAGCAATGTTTGAATAATTGAGCGCCATCCAACCTTTATTTTTC
                      ____________________________________________________________
consensus GACAGGTCATTTCTTGTAGCAATGTTTGAATAATTGAGCGCCATCCAACCTTTATTTTTC
 
. : . : . : . : . : . :
JMFF041E04+ ATCCACAACAATGAAGTCATTAGTTTTTTTACTTCCATTCATTGCCGAGACAAATTGTTT
JMFF033D05+ ATCCACAACAATGAAGTCATTAGTTTTTTTACTTCCATTCATTGCCGAGACAAATTGTTT
                      ____________________________________________________________
consensus ATCCACAACAATGAAGTCATTAGTTTTTTTACTTCCATTCATTGCCGAGACAAATTGTTT
 
. : . : . : . : . : . :
JMFF041E04+ TGGGAGTTGTCAATGACAATTGCTACAATTGCTGAGGAGAGGAGAAGAGAGGAGAGGACT
JMFF033D05+ TGGGAGTTGTCAATGACAATTGCTACAATTGCTGAGGAGAGGAGAAGAGAGGAGAGGACT
                      ____________________________________________________________
consensus TGGGAGTTGTCAATGACAATTGCTACAATTGCTGAGGAGAGGAGAAGAGAGGAGAGGACT