| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF004E17 | Sequence | 423 | 001241 (11) | gb:AB119653_1527934 | 8e-36 | Lilium longiflorum LP-ExoII mRNA for exo-1,3-beta-glucanase, complete cds. | 700 | 008765 (10) | gb:AY335818_1600221 | 9e-81 | Gossypium hirsutum beta-D-glucosidase mRNA, complete cds. |
| JMFF012E06 | Sequence | 542 | 001241 (11) | gb:AY357946_1601926 | 5e-56 | Lilium longiflorum exo-beta-glucanase (ExoI) mRNA, complete cds. | 751 | 008765 (10) | gb:AY335818_1600221 | 2e-63 | Gossypium hirsutum beta-D-glucosidase mRNA, complete cds. |
| JMFF026F10 | Sequence | 609 | 001241 (11) | gb:AB119653_1527934 | 1e-42 | Lilium longiflorum LP-ExoII mRNA for exo-1,3-beta-glucanase, complete cds. | 751 | 008765 (10) | gb:AY335818_1600221 | 5e-60 | Gossypium hirsutum beta-D-glucosidase mRNA, complete cds. |
| JMFF036H24 | Sequence | 585 | 001241 (11) | gb:AY357946_1601926 | 9e-59 | Lilium longiflorum exo-beta-glucanase (ExoI) mRNA, complete cds. | 709 | 008765 (10) | gb:AY335818_1600221 | 9e-84 | Gossypium hirsutum beta-D-glucosidase mRNA, complete cds. |
| JMFF038C17 | Sequence | 505 | 001241 (11) | gb:AB119653_1527934 | 1e-50 | Lilium longiflorum LP-ExoII mRNA for exo-1,3-beta-glucanase, complete cds. | 721 | 008765 (10) | gb:AY335818_1600221 | 4e-60 | Gossypium hirsutum beta-D-glucosidase mRNA, complete cds. |
| JMFF048N07 | Sequence | 284 | 001241 (11) | gb:AY091027_1574257 | 2e-08 | Arabidopsis thaliana putative beta-D-glucan exohydrolase (At5g20950) mRNA, compl | 219 | 001241 (11) | gb:AY357946_1601926 | 5e-19 | Lilium longiflorum exo-beta-glucanase (ExoI) mRNA, complete cds. |
| JMFF051P03 | Sequence | 589 | 001241 (11) | gb:AY357946_1601926 | 7e-56 | Lilium longiflorum exo-beta-glucanase (ExoI) mRNA, complete cds. | 512 | 008765 (10) | gb:AC091811_1735125 | 3e-48 | Oryza sativa chromosome 3 BAC OSJNBa0069E14 genomic sequence, complete sequence. |
| JMSF013I14 | Sequence | 554 | 001241 (11) | gb:AY357946_1601926 | 4e-58 | Lilium longiflorum exo-beta-glucanase (ExoI) mRNA, complete cds. | 714 | 008765 (10) | gb:AY335818_1600221 | 6e-81 | Gossypium hirsutum beta-D-glucosidase mRNA, complete cds. |
| JMSF024I05 | Sequence | 674 | 001241 (11) | gb:AB119653_1527934 | 4e-81 | Lilium longiflorum LP-ExoII mRNA for exo-1,3-beta-glucanase, complete cds. | 749 | 008765 (10) | gb:AC091811_1735125 | 1e-62 | Oryza sativa chromosome 3 BAC OSJNBa0069E14 genomic sequence, complete sequence. |
| JMSF036P02 | Sequence | 654 | 001241 (11) | gb:AB119653_1527934 | 7e-78 | Lilium longiflorum LP-ExoII mRNA for exo-1,3-beta-glucanase, complete cds. | 699 | 008765 (10) | gb:AY335818_1600221 | 1e-89 | Gossypium hirsutum beta-D-glucosidase mRNA, complete cds. |
This contig is upended
. : . : . : . : . : . :
JMSF024I05+ GTAATCCCGGGATGATTTCAGTCATAGCCCTCACAATCTCGGG
____________________________________________________________
consensus GTAATCCCGGGATGATTTCAGTCATAGCCCTCACAATCTCGGG
. : . : . : . : . : . :
JMSF036P02+ TACCGCAATGCA
JMFF036H24+ GCAATGCA
JMFF051P03+ TACCGCAATGCA
rJMFF048N07- TACCGCAATGCA
JMSF024I05+ ATCTTCGCTGTAACTCTCATAGCACCGGCCCCATCTAGGATCTCTACATACCGCAATGCA
____________________________________________________________
consensus ATCTTCGCTGTAACTCTCATAGCACCGGCCCCATCTAGGATCTCTACATACCGCAATGCA
. : . : . : . : . : . :
JMSF036P02+ GGGTGAAAATACGTATTGAATCCCAGTAGCCCTGACTTCAAGAGCAGTTGCAGCGCCAAT
JMFF036H24+ GGGTGAAAATACGTATTGAATCCCAGTAGCCCTGACTTCAAGAGCAGTTGCAGCGCCAAT
JMFF051P03+ GGGTGAAAATACGTA-TGAATCCCAGTAGCCCTGACTTCAAGAGCAGTTGCAGCGCCAAT
rJMFF048N07- GGGTGAAAATACGTATTGAATCCCAGTAGCCCTGACTTCAAGAGCAGTTGCAGCGCCAAT
JMSF024I05+ GGGTGAAAATACGTATTGAATCCCAGTAGCCCTGACTTCAAGAGCAGTTGCAGCGCCAAT
JMFF012E06+ ACTTCAAGAGCAGTTGCAGCGCCAAT
JMSF013I14+ CAGTAGCCCTGACTTCAAGAGCAGTTGCAGCGCCAAT
____________________________________________________________
consensus GGGTGAAAATACGTATTGAATCCCAGTAGCCCTGACTTCAAGAGCAGTTGCAGCGCCAAT
. : . : . : . : . : . :
JMSF036P02+ CCTCCTAACCAGTTGAGGAT-CCCTGGTTGCTCCAAGACCAACATTATGGGGGAAAATAG
JMFF036H24+ CCTCCTAACCAGTTGAGGATCCCCTGGTTGCTCCAAGACCAACATTATGGGGGAAAATAG
JMFF051P03+ CCTCCTAACCAGTTGAGGAT-CCCTGGTTGCTCCAAGACCAACATTATGGGGGAAAATAG
rJMFF048N07- CCTCCTAACCAGTTGAGGAT-CCCTGGTTGCTCCAAGACCAACATTATGGGGGAAAATAG
JMSF024I05+ CCTCCTAACCAGTTGAGGAT-CCCTGGTTGCTCCAAGACCAACATTATGGGGGAAAATAG
JMFF038C17+ GTTGAGGAT-CCCTGGTTGCTCCAAGACCAACATTATGGGGGAAAATAG
JMFF012E06+ CCTCCTAACCAGTTGAGGAT-CCCTGGTTGCTCCAAGACCAACATTATGGGGGAAAATAG
JMSF013I14+ CCTCCTAACCAGTTGAGGAT-CCCTGGTTGCTCCAAGACCAACATTATGGGGGAAAATAG
JMFF026F10+ GGAAAATAG
____________________________________________________________
consensus CCTCCTAACCAGTTGAGGAT-CCCTGGTTGCTCCAAGACCAACATTATGGGGGAAAATAG
. : . : . : . : . : . :
JMSF036P02+ TAGCTTTATAAACATTGTTTTGGCCATGAACTGCATCAATCCCATAAATCATAGGAATCC
JMFF036H24+ TAGCTTTATAAACATTGTTTTGGCCATGAACTGCATCAATCCCATAAATCATAGGAATCC
JMFF051P03+ TAGCTTTATAAACATTGTTTTGGCCATGAACTGCATCAATCCCATAAATCATAGGAATCC
JMFF004E17+ TGCATCAATCCCATAAATCATAGGAATCC
rJMFF048N07- TAGCTTTATAAACATTGTT
JMSF024I05+ TAGCTTTATAAACATTGTTTTGGCCATGAACTGCATCAATCCCATAAATCATAGGAATCC
JMFF038C17+ TAGCTTTATAAACATTGTTTTGGCCATGAACTGCATCAATCCCATAAATCATAGGAATCC
JMFF012E06+ TAGCTTTATAAACATTGTTTTGGCCATGAACTGCATCAATCCCATAAATCATAGGAATCC
JMSF013I14+ TAGCTTTATAAACATTGTTTTGGCCATGAACTGCATCAATCCCATAAATCATAGGAATCC
JMFF026F10+ TAGCTTTATAAACATTGTTTTGGCCATGAACTGCATCAATCCCATAAATCATAGGAATCC
____________________________________________________________
consensus TAGCTTTATAAACATTGTTTTGGCCATGAACTGCATCAATCCCATAAATCATAGGAATCC
. : . : . : . : . : . :
JMSF036P02+ CAAGCCGGGTCGCTAACGAGCCCTTCTGGAAATCATTCACCATGTCCACCCAGTCTTGAG
JMFF036H24+ CAAGCCGGGTCGCTAACGAGCCCTTCTGGAAATCATTCACCATGTCCACCCAGTCTTGAG
JMFF051P03+ CAAGCCGGGTCGCTAACGAGCCCTTCTGGAAATCATTCACCATGTCCACCCAGTCTTGAG
JMFF004E17+ CAAGCCGGGTCGCTAACGAGCCCTTCTGGAAATCATTCACCATGTCCACCCAGTCTTGAG
JMSF024I05+ CAAGCCGGGTCGCTAACGAGCCCTTCTGGAAATCATTCACCATGTCCACCCAGTCTTGAG
JMFF038C17+ CAAGCCGGGTCGCTAACGAGCCCTTCTGGAAATCATTCACCATGTCCACCCAGTCTTGAG
JMFF012E06+ CAAGCCGGGTCGCTAACGAGCCCTTCTGGAAATCATTCACCATGTCCACCCAGTCTTGAG
JMSF013I14+ CAAGCCGGGTCGCTAACGAGCCCTTCTGGAAATCATTCACCATGTCCACCCAGTCTTGAG
JMFF026F10+ CAAGCCGGGTCGCTAACGAGCCCTTCTGGAAATCATTCACCATGTCCACCCAGTCTTGAG
____________________________________________________________
consensus CAAGCCGGGTCGCTAACGAGCCCTTCTGGAAATCATTCACCATGTCCACCCAGTCTTGAG
. : . : . : . : . : . :
JMSF036P02+ CAGATGCCTTCTCCTTTGGAACACTCCCTCCTCCACTCAACACACTACCTATATAGTATT
JMFF036H24+ CAGATGCCTTCTCCTTTGGAACACTCCCTCCTCCACTCAACACACTACCTATATAGTATT
JMFF048N07+ GTATT
JMFF051P03+ CAGATGCCTTCTCCTTTGGAACACTCCCTCCTCCACTCAACAGACTACCTATATAGTATT
JMFF004E17+ CAGATGCCTTNTCCTTTGGAACACTCCCTCCTCCACTCAACACACTACCTATATAGTATT
JMSF024I05+ CAGATGCCTTCTCCTTTGGAACACTCCCTCCTCCACTCAACACACTACCTATATAGTATT
JMFF038C17+ CAGATGCCTTCTCCTTTGGAACACTCCCTCCTCCACTCAACACACTACCTATATAGTATT
JMFF012E06+ CAGATGCCTTCTCCTTTGGAACACTCCCTCCTCCACTCAACACACTACCTATATAGTATT
JMSF013I14+ CAGATGCCTTCTCCTTTGGAACACTCCCTCCTCCACTCAACACACTACCTATATAGTATT
JMFF026F10+ CAGATGCCTTCTCCTTTGGAACACTCCCTCCTCCACTCAACACACTACCTATATAGTATT
____________________________________________________________
consensus CAGATGCCTTCTCCTTTGGAACACTCCCTCCTCCACTCAACACACTACCTATATAGTATT
. : . : . : . : . : . :
JMSF036P02+ TCTTCATGACCTCAAAAGATGAAACTTGGCGTTCAATCTGAACCATTTGCCCAATTTTTT
JMFF036H24+ TCTTCATGACCTCAAAAGATGAAACTTGGCGTTCAATCTGAACCATTTGCCCAATTTTTT
JMFF048N07+ TCTTCATGACCTCAAAAGATGAAACTTGGCGTTCAATCTGAACCATTTGCCCAA-TTTTT
JMFF051P03+ TCTTCATGACCTCAAAAGATGAAACTTGGCGTTCAATCTGAACCATTTGCCCAATTTTTT
JMFF004E17+ TCTTCATGACCTCAAAAGATGAAACTTGGCGTTCAATCTGAACCATTTGCCCAATTTTTT
JMSF024I05+ TCTTCATGACCTCAAAAGATGAAACTTGGCGTTCAATCTGAACCATTTGCCCAATTTTTT
JMFF038C17+ TCTTCATGACCTCAAAAGATGAAACTTGGCGTTCAATCTGAACCATTTGCCCAATTTTTT
JMFF012E06+ TCTTCATGACCTCAAAAGATGAAACTTGGCGTTCAATCTGAACCATTTGCCCAATTTTTT
JMSF013I14+ TCTTCATGACCTCAAAAGATGAAACTTGGCGTTCAATCTGAACCATTTGCCCAATTTTTT
JMFF026F10+ TCTTCATGACCTCAAAAGATGAAACTTGGCGTTCAATCTGAACCATTTGCCCAATTTTTT
____________________________________________________________
consensus TCTTCATGACCTCAAAAGATGAAACTTGGCGTTCAATCTGAACCATTTGCCCAATTTTTT
. : . : . : . : . : . :
JMSF036P02+ CCTCCAAGCTCATCCTGCCCATCAGGTCCTTGATCCTTCGACCTATTGGCTTTGTTGGAT
JMFF036H24+ CCTCCAAGCTCATCCTGCCCATCAGGTCCTTGATCCTTCGACCTATTGGCTTTGTTGGAT
JMFF048N07+ CCTCCAAGCTCATCCTGCCCATCAGGTCCTTGATCCTTCGACCTATTGGCTTTGTTGGAT
JMFF051P03+ CCTCCAAGCTCATCCTGCCCATCAGGTCCTTGATCCTTCGACCTATTGGCTTTGTTGGAT
JMFF004E17+ CCTCCAAGCTCATCCTGCCCATCAGGTCCTTGATCCTTCGACCTATTGGCTTTGTTGGAT
JMSF024I05+ CCTCCAAGCTCATCCTGCCCATCAGGTCCTTGATCCTTCGACCTATTGGCTTTGTTGGAT
JMFF038C17+ CCTCCAAGCTCATCCTGCCCATCAGGTCCTTGATCCTTCGACCTATTGGCTTTGTTGGAT
JMFF012E06+ CCTCCAAGCTCATCCTGCCCATCAGGTCCTTGATCCTTCGACCTATTGGCTTTGTTGGAT
JMSF013I14+ CCTCCAAGCTCATCCTGCCCATCAGGTCCTTGATCCTTCGACCTATTGGCTTTGTTGGAT
JMFF026F10+ CCTCCAAGCTCATCCTGCCCATCAGGTCCTTGATCCTTCGACCTATTGGCTTTGTTGGAT
____________________________________________________________
consensus CCTCCAAGCTCATCCTGCCCATCAGGTCCTTGATCCTTCGACCTATTGGCTTTGTTGGAT
. : . : . : . : . : . :
JMSF036P02+ CTTTGTAGAGCATGTAATCTGCATTGGCTACAAACACACAACCACATACCACAACAATCC
JMFF036H24+ CTTTGTAGAGCATGTAATCTGCATTGGCTACAAACACACAACCACATACCACAACAATCC
JMFF048N07+ CTTTGTAGAGCATGTAATCTGCATTGGCTACAAACACACAACCACATACCACAACAATCC
JMFF051P03+ CTTTGTAGAGCATGTAATCTGCATTGGCTACAAACACACAACCACATACCACAACAATCC
JMFF004E17+ CTTTGTAGAGCATGTAATCTGCATTGGCTACAAACACACAACCACATACCACAACAATCC
JMSF024I05+ CTTTGTAGAGCATGTAATCTGCATTGGCTACAAACACACAACCACATACCACAACAATCC
JMFF038C17+ CTTTGTAGAGCATGTAATCTGCATTGGCTACAAACACACAACCACATACCACAACAATCC
JMFF012E06+ CTTTGTAGAGCATGTAATCTGCATTGGCTACAAACACACAACCACATACCACAACAATCC
JMSF013I14+ CTTTGTAGAGCATGTAATCTGCATTGGCTACAAACACACAACCACATACCACAACAATCC
JMFF026F10+ CTTTGTAGAGCATGTAATCTGCATTGGCTACAAACACACAACCACATACCACAACAATCC
____________________________________________________________
consensus CTTTGTAGAGCATGTAATCTGCATTGGCTACAAACACACAACCACATACCACAACAATCC
. : . : . : . : . : . :
JMSF036P02+ CAATCAAGAATCTCAGCTCTTTCCCCATTTTCCCTCTCCAA------AGAGAAGGTAGCT
JMFF036H24+ CAATCAAGAATCTCAGCTCTTTCCCCATTTTCCCTCTCCAACTGTACAGAGAAGGTAGCT
JMFF048N07+ CAATCAAGAATCTCAGCTCTTTCCCCATTTTCCCTCTCCAACTGTACAGAGAAGGTAGCT
JMFF051P03+ CAATCAAGAATCTCAGCTCTTTCCCCATTTTCCCTCTCCAACTGTACAGAGAAGGTAGCT
JMFF004E17+ CAATCAAGAATCTCAGCTCTTTCCCCATTTTCCCTCTCCAA------AGAGAAGGTAGCT
JMSF024I05+ CAATCAAGAATCTCAGCTCTTTCCCCATTTTCCCTCTCCAA------AGAGAAGGTAGCT
JMFF038C17+ CAATCAAGAATCTCAGCTCTTTCCCCATTTTCCCTCTCCAACTGTACAGAGAAGGTAGCT
JMFF012E06+ CAATCAAGAATCTCAGCTCTTTCCCCATTTTCCCTCTCCAACTGTACAGAGAAGGTAGCT
JMSF013I14+ CAATCAAGAATCTCAGCTCTTTCCCCATTTTCCCTCTCCAACTGTACAGAGAAGGTAGCT
JMFF026F10+ CAATCAAGAATCTCAGCTCTTTCCCCATTTTCCCTCTCCAACTGTACAGAGAAGGTAGCT
____________________________________________________________
consensus CAATCAAGAATCTCAGCTCTTTCCCCATTTTCCCTCTCCAACTGTACAGAGAAGGTAGCT
. : . : . : . : . : . :
JMSF036P02+ GGAGTGAGGCTGGGCGGTTTGATCAGCTTCTGTTC
JMFF036H24+ GGAGTGAGGCTGGGCGGTTTGATCAGCTTCAGTTC
JMFF048N07+ GGAGTGAGGCTGGGCGGTTTGATCAGCTTCTGTT
JMFF051P03+ GGAGTGAGGCTGGGCGGTTTGATCAGCTTCTGTTC
JMFF004E17+ GGAGTGAGGCTGGGCGGTTTGATCAGCTTCTGTTCAC
JMSF024I05+ GGAGTGAGGCTGGGCGGTTTGATCAGCTTCTGTTCAC
JMFF038C17+ GGAGTGAGGCTGGGCGGTTTGATCAGCTTCTG
JMFF012E06+ GGAGTGAGGCTGGGCGGTTTGATCAGCTTCTG
JMSF013I14+ GGAGTGAGGCTGGGCGGTTTGATCAGCTTCTGTTCAC
JMFF026F10+ GGAGTGAGGCTGGGCGGTTTGATCAGCTTCTGTTCACGGCTTCACGGATGGAAGAAATCT
____________________________________________________________
consensus GGAGTGAGGCTGGGCGGTTTGATCAGCTTCTGTTCACGGCTTCACGGATGGAAGAAATCT
. : . : . : . : . : . :
JMFF026F10+ CAATTTAATGACTTCTAAGAAGACAACATTACAAAGTAGTGGTTGTAAGTTGTAACCAGT
____________________________________________________________
consensus CAATTTAATGACTTCTAAGAAGACAACATTACAAAGTAGTGGTTGTAAGTTGTAACCAGT
. : . : . : . : . : . :
JMFF026F10+ GGGTTGTGGACACTAAGGAAATGTCAATTCATTGTATTGTTGCCATATCTTGTTTTGTAC
____________________________________________________________
consensus GGGTTGTGGACACTAAGGAAATGTCAATTCATTGTATTGTTGCCATATCTTGTTTTGTAC