Previous Contig 001165:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF017I16Sequence407001165 (3)gb:AB107693_15267511e-44Nicotiana tabacum AGP5 mRNA for AG-motif binding protein-5, complete cds.730009011 (2)gb:AB107689_15267474e-39Nicotiana tabacum AGP1 mRNA for AG-motif binding protein-1, complete cds.
JMFF024A05Sequence566001165 (3)gb:AB107693_15267513e-46Nicotiana tabacum AGP5 mRNA for AG-motif binding protein-5, complete cds.712009011 (2)gb:AB107689_15267471e-39Nicotiana tabacum AGP1 mRNA for AG-motif binding protein-1, complete cds.
JMFS093C05Sequence618001165 (3)gb:AB107689_15267471e-67Nicotiana tabacum AGP1 mRNA for AG-motif binding protein-1, complete cds.

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS093C05+ TCGGACTCTGATGAGACTGCAGGAGCAACAAAGGGCTGTGG
                      ____________________________________________________________
consensus TCGGACTCTGATGAGACTGCAGGAGCAACAAAGGGCTGTGG
 
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JMFS093C05+ AGCCTCGGTGAAGGACGATGTGGGAGAGATGAGTTGAATCGCTGGCCTCGGGTTGAAAGT
                      ____________________________________________________________
consensus AGCCTCGGTGAAGGACGATGTGGGAGAGATGAGTTGAATCGCTGGCCTCGGGTTGAAAGT
 
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JMFS093C05+ TGCGGGGCGAGGGCGCTTGCTCCTAGCTCGCTGCACACCACAACGACTCGGGCTAAGCGG
                      ____________________________________________________________
consensus TGCGGGGCGAGGGCGCTTGCTCCTAGCTCGCTGCACACCACAACGACTCGGGCTAAGCGG
 
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JMFS093C05+ GATAGTCGTCTTCCCTCCCGAGCACGAGGACGAGCTGCTGCTGCTGCTGCTACTTTCAAG
                      ____________________________________________________________
consensus GATAGTCGTCTTCCCTCCCGAGCACGAGGACGAGCTGCTGCTGCTGCTGCTACTTTCAAG
 
. : . : . : . : . : . :
JMFS093C05+ AACCGAGACCGGACTCGAGGTCTGGAACTTGTTGTGAGGTGGCTCCACGTTCACAGGAGT
                      ____________________________________________________________
consensus AACCGAGACCGGACTCGAGGTCTGGAACTTGTTGTGAGGTGGCTCCACGTTCACAGGAGT
 
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JMFS093C05+ GTTCTCTTTCCCGAGAGTCATCCCTCCACCCGAGAACGAATCCTCCACGAACGTCGAAAG
JMFF017I16+ GTTCTCTTTCCCGAGAGTCATCCCTCCACCCGAGAACGAATCCTCCACGAACGTCGAAAG
JMFF024A05+ GTTCTCTTTCCCGAGAGTCATCCCTCCACCCGAGAACGAATCCTCCACGAACGTCGAAAG
                      ____________________________________________________________
consensus GTTCTCTTTCCCGAGAGTCATCCCTCCACCCGAGAACGAATCCTCCACGAACGTCGAAAG
 
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JMFS093C05+ CCATTCGAGCTGGATAATGTCCTCATACGGCACTGAGAGCTCCGCCGACAGGTCAGCTGC
JMFF017I16+ CCATTCGAGCTGGATAATGTCCTCATACGGCACTGAGAGCTCCGCCGACAGGTCAGCTGC
JMFF024A05+ CCATTCGAGCTGGATAATGTCCTCATACGGCACTGAGAGCTCCGCCGACAGGTCAGCTGC
                      ____________________________________________________________
consensus CCATTCGAGCTGGATAATGTCCTCATACGGCACTGAGAGCTCCGCCGACAGGTCAGCTGC
 
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JMFS093C05+ CGAGTTGTTGTGGCTGCCGGAGAAAAGGGGCTCGGAATCCGGCAAGGGGTCGTTACAAAT
JMFF017I16+ CGAGTTGTTGTGGCTGCCGGAGAAAAGGGGCTCGGAATCCGGCAAGGGGTCGTTCCAAAT
JMFF024A05+ CGAGTTGTTGTGGCTGCCGGAGAAAAGGGGCTCGGAATCCGGCAAGGGGTCGTTCCAAAT
                      ____________________________________________________________
consensus CGAGTTGTTGTGGCTGCCGGAGAAAAGGGGCTCGGAATCCGGCAAGGGGTCGTTCCAAAT
 
. : . : . : . : . : . :
JMFS093C05+ GCTGGGAAAATTCTTGAACTCGCCGGAACCGACACCGCCGACACACTCATTCTCCGGTGG
JMFF017I16+ GCTGGGAAAATTCTTGAACTCGCCGGAACCGACACCGCCGACACACTCATTCTCCGGTGG
JMFF024A05+ GCTGGGAAAATTCTTGAACTCGCCGGAACCGACACCGCCGACACACTCATTCTCCGGTGG
                      ____________________________________________________________
consensus GCTGGGAAAATTCTTGAACTCGCCGGAACCGACACCGCCGACACACTCATTCTCCGGTGG
 
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JMFS093C05+ GAATTCAATCAAGTCGTCAATGTGATCAAAGAAGCTACCGCAGTCTAATTCATCGATGAA
JMFF017I16+ GAATTCAATCAAGTCGTCAATGTGATCAAAGAAGCTACCGCAGTCTAATTCATCCATGAA
JMFF024A05+ GAATTCAATCAAGTCGTCAATGTGATCAAAGAAGCTACCGCAGTCTAATTCATCCATGAA
                      ____________________________________________________________
consensus GAATTCAATCAAGTCGTCAATGTGATCAAAGAAGCTACCGCAGTCTAATTCATCCATGAA
 
. : . : . : . : . : . :
JMFS093C05+ ATTTGA
JMFF017I16+ ATTTGA
JMFF024A05+ ATTTGACCCCATGCTACCTTGAAGAGTGGTTGAGGAGCTTAGCGGCACAAGGGAAGGAGA
                      ____________________________________________________________
consensus ATTTGACCCCATGCTACCTTGAAGAGTGGTTGAGGAGCTTAGCGGCACAAGGGAAGGAGA
 
. : . : . : . : . : . :
JMFF024A05+ AGAAGAAGCTATGGGAGAAGTGAAGGAGAATAGGGAGAGCAGAAGAAAGCTAAAAAGGGG
                      ____________________________________________________________
consensus AGAAGAAGCTATGGGAGAAGTGAAGGAGAATAGGGAGAGCAGAAGAAAGCTAAAAAGGGG
 
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JMFF024A05+ AAAGAGAGAATGGGGTACGGTAGGTGAAGCTCTTGCCTCACTGCTAGCTGTATGTATTTC
                      ____________________________________________________________
consensus AAAGAGAGAATGGGGTACGGTAGGTGAAGCTCTTGCCTCACTGCTAGCTGTATGTATTTC