Previous Contig 000970:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF013J21Sequence601000970 (5)pir|D86315|D863155e-48hypothetical protein T10F20.2 [imported] - Arabidopsis thaliana>gb:AE005172_8907702009096 (3)gb:AY084456_15695462e-51Arabidopsis thaliana clone 108615 mRNA, complete sequence.
JMFF019B03Sequence512000970 (5)pir|D86315|D863154e-37hypothetical protein T10F20.2 [imported] - Arabidopsis thaliana>gb:AE005172_8907725009096 (3)gb:AY084456_15695465e-50Arabidopsis thaliana clone 108615 mRNA, complete sequence.
JMFS086D09Sequence630000970 (5)pir|D86315|D863151e-60hypothetical protein T10F20.2 [imported] - Arabidopsis thaliana>gb:AE005172_8907
JMFS155F08Sequence627000970 (5)pir|D86315|D863159e-55hypothetical protein T10F20.2 [imported] - Arabidopsis thaliana>gb:AE005172_8907
JMSF050H07Sequence710000970 (5)pir|D86315|D863151e-60hypothetical protein T10F20.2 [imported] - Arabidopsis thaliana>gb:AE005172_8907750009096 (3)gb:AY084456_15695463e-62Arabidopsis thaliana clone 108615 mRNA, complete sequence.

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS086D09+ ATGAAGCAGGGAGGAGCAGAATC
                      ____________________________________________________________
consensus ATGAAGCAGGGAGGAGCAGAATC
 
. : . : . : . : . : . :
JMFS086D09+ ATCTCCCACTTCAAGAACAGCCGGAGAATCTCCCGGGATTCCACTGCCACGCTGGAGAAT
                      ____________________________________________________________
consensus ATCTCCCACTTCAAGAACAGCCGGAGAATCTCCCGGGATTCCACTGCCACGCTGGAGAAT
 
. : . : . : . : . : . :
JMFS086D09+ CTGATGTTCGTACACTTTGTGCCGTCGTCCCGGATTACGCGGCTGGGGTGAAGGATCGCC
JMSF050H07+ CGGCTGGGGTGAAGGATCGCC
                      ____________________________________________________________
consensus CTGATGTTCGTACACTTTGTGCCGTCGTCCCGGATTACGCGGCTGGGGTGAAGGATCGCC
 
. : . : . : . : . : . :
JMFS086D09+ AGAGACAGGAGAGTTCCGGCGGACATGAAGGCCATGAATCCGATGTAAGTCCCGTCGTTC
JMFS155F08+ ATGTAAGTCCCGTCGTTC
JMSF050H07+ AGAGACAGGAGAGTTCCGGAGGACATGAAGGCCATGAATCCGATGTAAGTCCCGTCGTTC
                      ____________________________________________________________
consensus AGAGACAGGAGAGTTCCGGCGGACATGAAGGCCATGAATCCGATGTAAGTCCCGTCGTTC
 
. : . : . : . : . : . :
JMFS086D09+ ACTGAAGCGGCGTCGTTTCGACGGAAGTTCGATAAGAAAGGGATGAGTCCTCCGGTGACG
JMFS155F08+ ACTGAAGCGGCGTCGTTTCGACGGAAGTTCGATAAGAAAGGGATGAGTCCTCCGGTGACG
JMSF050H07+ ACTGAAGCGGCGTCGTTTCGACGGAAGTTCGATAAGAAAGGGATGAGTCCTCCGGTGACG
JMFF013J21+ GATAAGAAAGGGATGAGTCCTCCGGTGACG
                      ____________________________________________________________
consensus ACTGAAGCGGCGTCGTTTCGACGGAAGTTCGATAAGAAAGGGATGAGTCCTCCGGTGACG
 
. : . : . : . : . : . :
JMFS086D09+ CCGCCGAGGCTGAATATGTTCCAGAACAAGGAGATGTAGATTCCTTTCCGGCCGTGGGGT
JMFS155F08+ CCGCCGAGGCTGAATATGTTCCAGAACAAGGAGATGTAGATTCCTTTCCGGCCGTGGGGT
JMSF050H07+ CCGCCGAGGCTGAATATGTTCCAGAACAAGGAGATGTAGATTCCTTTCCGGCCGTGGGGT
JMFF013J21+ CCGCCGAGGCTGAATATGTTCCAGAACAAGGAGATGTAGATTCCTTTCCGGCCGTGGGGT
                      ____________________________________________________________
consensus CCGCCGAGGCTGAATATGTTCCAGAACAAGGAGATGTAGATTCCTTTCCGGCCGTGGGGT
 
. : . : . : . : . : . :
JMFS086D09+ GGGTACGAGGTCATTATAGCCCCCTGGGCCGCCCACAATAGGCCGGCTCCGACGCCGAGG
JMFS155F08+ GGGTACGAGGTCATTATAGCCCCCTGGGCCGCCCACAATAGGCCGGCTCCGACGCCGAGG
JMSF050H07+ GGGTACGAGGTCATTATAGCCCCCTGGGCCGCCCACAATAGGCCGGCTCCGACGCCGAGG
JMFF013J21+ GGGTACGAGGTCATTATAGCCCCCTGGGCCGCCCACAATAGGCCGGCTCCGACGCCGAGG
JMFF019B03+ GCCGCCCACAATAGGCCGGCTCCGACGCCGAGG
                      ____________________________________________________________
consensus GGGTACGAGGTCATTATAGCCCCCTGGGCCGCCCACAATAGGCCGGCTCCGACGCCGAGG
 
. : . : . : . : . : . :
JMFS086D09+ AGAGCGCCGGCGACGACGGCGAAGGCCTGGTGCTTGTGATGGTTGTAGTAGAGGAAAGAG
JMFS155F08+ AGAGCGCCGGCGACGACGGCGAAGGCCTGGTGCTTGTGATGGTTGTAGTAGAGGAAAGAG
JMSF050H07+ AGAGCGCCGGCGACGACGGCGAAGGCCTGGTGCTTGTGATGGTTGTAGTAGAGGAAAGAG
JMFF013J21+ AGAGCGCCGGCGACGACGGCGAAGGCCTGGTGCTTGTGATGGTTGTAGTAGAGGAAAGAG
JMFF019B03+ AGAGCGCCGGCGACGACGGCGAAGGCCTGGTGCTTGTGATGGTTGTAGTAGAGGAAAGAG
                      ____________________________________________________________
consensus AGAGCGCCGGCGACGACGGCGAAGGCCTGGTGCTTGTGATGGTTGTAGTAGAGGAAAGAG
 
. : . : . : . : . : . :
JMFS086D09+ CCGGCGTAGAGGACGTAGGTGGAGCAGCCGGCGGAGAGGGTGGCTCGCGGCCCCAAGATG
JMFS155F08+ CCGGCGTAGAGGACGTAGGTGGAGCAGCCGGCGGAGAGGGTGGCTCGCGGCCCCAAGATG
JMSF050H07+ CCGGCGTAGAGGACGTAGGTGGAGCAGCCGGCGGAGAGGGTGGCTCGCGGCCCCAAGATG
JMFF013J21+ CCGGCGTAGAGGACGTAGGTGGAGCAGCCGGCGGAGAGGGTGGCTCGCGGCCCCAAGATG
JMFF019B03+ CCGGCGTAGAGGACGTAGGTGGAGCAGCCGGCGGAGAGGGTGGCTCGCGGCCCCAAGATG
                      ____________________________________________________________
consensus CCGGCGTAGAGGACGTAGGTGGAGCAGCCGGCGGAGAGGGTGGCTCGCGGCCCCAAGATG
 
. : . : . : . : . : . :
JMFS086D09+ TTGTAGATTCCGCCGCCTAGGATCCCGAAGACGGCGAAGGTGGTGTAGAGGGCGGTGTTG
JMFS155F08+ TTGTAGATTCCGCCGCCTAGGATCCCGAAGACGGCGAAGGTGGTGTAGAGGGCGGTGTTG
JMSF050H07+ TTGTAGATTCCGCCGCCTAGGATCCCGAAGACGGCGAAGGTGGTGTAGAGGGCGGTGTTG
JMFF013J21+ TTGTAGATTCCGCCGCCTAGGATCCCGAAGACGGCGAAGGTGGTGTAGAGGGCGGTGTTG
JMFF019B03+ TT-TAGATTCCGCCGCCTAGGATCCCGAAGACGGCGAAGGTGGTGTAGAGGGCGGTGTTG
                      ____________________________________________________________
consensus TTGTAGATTCCGCCGCCTAGGATCCCGAAGACGGCGAAGGTGGTGTAGAGGGCGGTGTTG
 
. : . : . : . : . : . :
JMFS086D09+ GCGTTGTTGACGGCGGTGGTGTCCACCTGTCCGCCACCGCCCATTGACACGAGCGCGCTG
JMFS155F08+ GCGTTGTTGACGGCGGTGGTGTCCACCTGTCCGCCACCGCCCATTGACACGAGCGCGCTG
JMSF050H07+ GCGTTGTTGACGGCGGTGGTGTCCACCTGTCCGCCACCGCCCATTGACACGAGCGCGCTG
JMFF013J21+ GCGTTGTTGACGGCGGTGGTGTCCACCCGTCCGCCACCGCCCATTGACACGAGCGCGCTG
JMFF019B03+ GCGTTGTTGACGGCGGTGGTGTCCACCTGTCCGCCACCGCCCATTGACACGAGCGCGCTG
                      ____________________________________________________________
consensus GCGTTGTTGACGGCGGTGGTGTCCACCTGTCCGCCACCGCCCATTGACACGAGCGCGCTG
 
. : . : . : . : . : . :
JMFS086D09+ AACATTC
JMFS155F08+ AACATTCCCGGACAGCAAAAACAGACCAGCCCAATCAAGGAAACCTGAACCACCGGCGAG
JMSF050H07+ AACATTCCCGGACAGCAAAAACAGACCAGCCCAATCAAGGAAACCTGAACCACCGGCGAG
JMFF013J21+ AACATTCCCGGACAGCAAAAACAGACCAGCCCAATCAAGGAAACCTGAACCACCGGCGAG
JMFF019B03+ AACATTCCCGGACAGCAAAAACAGACCAGCCCAATCAAGGAAACCTGAACCACCGGCGAG
                      ____________________________________________________________
consensus AACATTCCCGGACAGCAAAAACAGACCAGCCCAATCAAGGAAACCTGAACCACCGGCGAG
 
. : . : . : . : . : . :
JMFS155F08+ TTGTACCTCAAAACCCAGCTTTTGCTTACTGGCTCCTCCGGCGGCCATGGCCCTTTGCCG
JMSF050H07+ TTGTACCTCAAAACCCAGCTTTTGCTTACTGGCTCCTCCGGCGGCCATGGCCCTTTGCCG
JMFF013J21+ TTGTACCTCAAAACCCAGCTTTTGCTTACTGGCTCCTCCGGCGGCCATGGCCCTTTGCCG
JMFF019B03+ TTGTACCTCAAAACCCAGCTTTTGCTTACTGGCTCCTCCGGCGGCCATGGCCCTTTGCCG
                      ____________________________________________________________
consensus TTGTACCTCAAAACCCAGCTTTTGCTTACTGGCTCCTCCGGCGGCCATGGCCCTTTGCCG
 
. : . : . : . : . : . :
JMFS155F08+ CCCTTCTCTTCATCTTTCTCGGGTTCCATTTCTCAGATCACCTGTAACTCTTACGCTCCC
JMSF050H07+ CCCTTCTCTTCATCTTTCTCGGGTTCCATTTCTCAGATCACCTGTAACTCTTACGCTCCC
JMFF013J21+ CCCTTCTCTTCATCTTTCTCGGGTTCCATTTCTCAGATCACCTGTAACTCTTACGCTCCC
JMFF019B03+ CCCTTCTCTTCATCTTTCTCGGGTTCCATTTCTCAGATCACCTGTAACTCTTACGCTCCC
                      ____________________________________________________________
consensus CCCTTCTCTTCATCTTTCTCGGGTTCCATTTCTCAGATCACCTGTAACTCTTACGCTCCC
 
. : . : . : . : . : . :
JMFS155F08+ AAAATCCTT
JMSF050H07+ AAAATCCTTGAAATTATTTATTACCAC
JMFF013J21+ AAAATCCTTGAAATTATTTATTACCAC
JMFF019B03+ AAAATCCTTGAAATTATTTATTACCACAAATGAACAAAATAATACACACATATTGCTTAT
                      ____________________________________________________________
consensus AAAATCCTTGAAATTATTTATTACCACAAATGAACAAAATAATACACACATATTGCTTAT