Previous Contig 000895:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF017G18Sequence584000895 (5)gb:AF108896_17686435e-75Capsicum annuum GTP-binding protein mRNA, complete cds.743011619 (5)gb:AF108896_1768643e-111Capsicum annuum GTP-binding protein mRNA, complete cds.
JMFF027L02Sequence553000895 (5)gb:AF108896_17686435e-69Capsicum annuum GTP-binding protein mRNA, complete cds.717011619 (5)gb:AF108896_1768643e-105Capsicum annuum GTP-binding protein mRNA, complete cds.
JMSF011C12Sequence279000895 (5)gb:AF108896_17686435e-18Capsicum annuum GTP-binding protein mRNA, complete cds.806011619 (5)gb:AF108896_17686431e-94Capsicum annuum GTP-binding protein mRNA, complete cds.
JMSF011D18Sequence353000895 (5)gb:AF108896_17686436e-33Capsicum annuum GTP-binding protein mRNA, complete cds.767011619 (5)gb:AF108896_17686431e-93Capsicum annuum GTP-binding protein mRNA, complete cds.
JMSF051I08Sequence621000895 (5)gb:AF108896_17686435e-87Capsicum annuum GTP-binding protein mRNA, complete cds.693011619 (5)pir|A86431|A864312e-86hypothetical protein T5I8.3 - Arabidopsis thaliana>gb:AE005172_891905 Arabidopsi

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF051I08+ TCTCCATGAACTCAATATCCTTAAGCCTCAATTCCTCACTAATAACCTCCA
                      ____________________________________________________________
consensus TCTCCATGAACTCAATATCCTTAAGCCTCAATTCCTCACTAATAACCTCCA
 
. : . : . : . : . : . :
JMSF051I08+ AATCTCTCACAGGATCTACAGTATCATCAACATGTATAATATCTGAATCTTCAAAGGCAC
JMFF027L02+ TCTTCAAAGGCAC
JMFF017G18+ TACAGTATCATCAACATGTATAATATCTGAATCTTCAAAGGCAC
                      ____________________________________________________________
consensus AATCTCTCACAGGATCTACAGTATCATCAACATGTATAATATCTGAATCTTCAAAGGCAC
 
. : . : . : . : . : . :
JMSF051I08+ GTAAGACATGGAAAATGCCATCAACTGCACGGATATGAGATAAGAAACTATTCCCCAGTC
JMFF027L02+ GTAAGACATGGAAAATGCCATCAACTGCACGGATATGAGATAAGAAACTATTCCCCAGTC
JMFF017G18+ GTAAGACATGGAAAATGCCATCAACTGCACGGATATGAGATAAGAAACTATTCCCCAGTC
                      ____________________________________________________________
consensus GTAAGACATGGAAAATGCCATCAACTGCACGGATATGAGATAAGAAACTATTCCCCAGTC
 
. : . : . : . : . : . :
JMSF051I08+ CTTGTCCTTCATGAGCACCTCTAACAAGTCCAGCTATATCATGAATTTCTAGGAAAGCTG
JMFF027L02+ CTTGTCCTTCATGAGCACCTCTAACAAGTCCAGCTATATCATGAATTTCTAGGAAAGCTG
JMFF017G18+ CTTGTCCTTCATGAGCACCTCTAACAAGTCCAGCTATATCATGAATTTCTAGGAAAGCTG
                      ____________________________________________________________
consensus CTTGTCCTTCATGAGCACCTCTAACAAGTCCAGCTATATCATGAATTTCTAGGAAAGCTG
 
. : . : . : . : . : . :
JMSF051I08+ ACACCTCACTCTTTGGCTTGTACAGTTGGCACAGCCATTCAAATCTCTCATCTGGTACAT
JMFF027L02+ ACACCTCACTCTTTGGCTTGTACAGTTGGCACAGCCATTCAAATCTCTCATCTGGTACAT
JMSF011D18+ CTGGTACAT
JMFF017G18+ ACACCTCACTCTTTGGCTTGTACAGTTGGCACAGCCATTCAAATCTCTCATCTGGTACAT
                      ____________________________________________________________
consensus ACACCTCACTCTTTGGCTTGTACAGTTGGCACAGCCATTCAAATCTCTCATCTGGTACAT
 
. : . : . : . : . : . :
JMSF051I08+ TCACTCGAGCCTCATTGGGCTCAATAGTGCAAAACGGGAAGTTCTCTGCGGGAATTGACA
JMFF027L02+ TCACTCGAGCCTCATTGGGCTCAATAGTGCAAAACGGGAAGTTCTCTGCGGGAATTGACA
JMSF011D18+ TCACTCGAGCCTCATTGGGCTCAATAGTGCAAAACGGGAAGTTCTCTGCGGGAATTGACA
JMFF017G18+ TCACTCGAGCCTCATTGGGCTCAATAGTGCAAAACGGGAAGTTCTCTGCGGGAATTGACA
                      ____________________________________________________________
consensus TCACTCGAGCCTCATTGGGCTCAATAGTGCAAAACGGGAAGTTCTCTGCGGGAATTGACA
 
. : . : . : . : . : . :
JMSF051I08+ ACTTCGTAAGCGTGTTAAAAAGTGTGGACTTTCCCACATTTGGTAATCCAACGATTCCAA
JMFF027L02+ ACTTCGTAAGCGTGTTAAAAAGTGTGGACTTTCCCACATTTGGTAATCCAACGATTCCAA
JMSF011D18+ ACTTCGTAAGCGTGTTAAAAAGTGTGGACTTTCCCACATTTGGTAATCCAACGATTCCAA
JMSF011C12+ GTAAGCGTGTTAAAAAGTGTGGACTTTCCCACATTTGGTAATCCAACGATTCCAA
JMFF017G18+ ACTTCGTAAGCGTGTTAAAAAGTGTGGACTTTCCCACATTTGGTAATCCAACGATTCCAA
                      ____________________________________________________________
consensus ACTTCGTAAGCGTGTTAAAAAGTGTGGACTTTCCCACATTTGGTAATCCAACGATTCCAA
 
. : . : . : . : . : . :
JMSF051I08+ TTTTGAGGTGAGACGAGAAACGGCCGAGAATGGGCCGTTCAGCCGGAACTTCTTTGCCTT
JMFF027L02+ TTTTGAGGTGAGACGAGAAACGGCCGAGAATGGGCCGTTCAGCCGGAACTTCTTTGCCTT
JMSF011D18+ TTTTGAGGTGAGACGAGAAACGGCCGAGAATGGGCCGTTCAGCCGGAACTTCTTTGCCTT
JMSF011C12+ TTTTGAGGTGAGACGAGAAACGGCCGAGAATGGGCCGTTCAGCCGGAACTTCTTTGCCTT
JMFF017G18+ TTTTGAGGTGAGACGAGAAACGGCCGAGAATGGGCCGTTCAGCCGGAACTTCTTTGCCTT
                      ____________________________________________________________
consensus TTTTGAGGTGAGACGAGAAACGGCCGAGAATGGGCCGTTCAGCCGGAACTTCTTTGCCTT
 
. : . : . : . : . : . :
JMSF051I08+ TAGCAGCTTTTGGAGGCATCTCTTTTGCAGCTGAGAAGATCAGAAGACAAAGCGAAGAAC
JMFF027L02+ TAGCAGCTTTTGGAGGCATCTCTTTTGCAGCTGAGAAGATCAGAAGACAAAGCGAAGAAC
JMSF011D18+ TAGCAGCTTTTGGAGGCATCTCTTTTGCAGCTGAGAAGATCAGAAGACAAAGCGAAGAAC
JMSF011C12+ TAGCAGCTTTTGGAGGCATCTCTTTTGCAGCTGAGAAGATCAGAAGACAAAGCGAAGAAC
JMFF017G18+ TAGCAGCTTTTGGAGGCATCTCTTTTGCAGCTGAGAAGATCAGAAGACAAAGCGAAGAAC
                      ____________________________________________________________
consensus TAGCAGCTTTTGGAGGCATCTCTTTTGCAGCTGAGAAGATCAGAAGACAAAGCGAAGAAC
 
. : . : . : . : . : . :
JMSF051I08+ TTCAAGCTTCCTGATAGATGTAGGAGCTTTAGGGTTTAGCGATTGTAGTATAGTACTGCA
JMFF027L02+ TTCAAGCTTCCTGATAGATGTAGGAGCTTTAGGGTTTAGCGATTGTAGTATAGTACTGCA
JMSF011D18+ TTCAAGCTTCCTGATAGATGTAGGAGCTTTAGGGTTTAGCGATTGTAGTATAGTACTGCA
JMSF011C12+ TTCAAGCTTCCTGATAGATGTAGGAGCTTTAGGGTTTAGCGATTGTAGTATAGTACTGCA
JMFF017G18+ TTCAAGCTTCCTGATAGATGTAGGAGCTTTAGGGTTTAGCGATTGTAGTATAGTACTGCA
                      ____________________________________________________________
consensus TTCAAGCTTCCTGATAGATGTAGGAGCTTTAGGGTTTAGCGATTGTAGTATAGTACTGCA
 
. : . : . : . : . : . :
JMSF051I08+ GATACGCAGCTCCTCAGCGATGGCGGCGT
JMFF027L02+ GATACGCAGCTCCTCAGCGATGGCGGCGTGGTGGAGCTGTGCCACTGAAATTGGTAATCC
JMSF011D18+ GATACGCAGCTCCTCAGCGATGGCGGCGTGGTGGAGCTGTGC
JMSF011C12+ GATACGCAGCTCCTCAGCGATGGCGGCGTGGTGGAGCTGTGC
JMFF017G18+ GATACGCAGCTCCTCAGCGATGGCGGCGTGGTGGAGCTGTGCCACTGAAATTGGTAATCC
                      ____________________________________________________________
consensus GATACGCAGCTCCTCAGCGATGGCGGCGTGGTGGAGCTGTGCCACTGAAATTGGTAATCC