Previous Contig 000729:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF013P22Sequence557000729 (2)gb:OSJN00175_16962084e-38Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064D20, complete seque706009413 (2)pir|B86458|B864582e-08probable protein nitrate transporter NTL1 54085-51470 [imported] - Arabidopsis t
JMFF025M11Sequence558000729 (2)gb:OSJN00175_16962084e-38Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064D20, complete seque697009413 (2)pir|B86458|B864582e-07probable protein nitrate transporter NTL1 54085-51470 [imported] - Arabidopsis t

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF025M11+ CTTAGCTGTGGTAGATGA
JMFF013P22+ TTAGCTGTGGTAGATGA
                      ____________________________________________________________
consensus CTTAGCTGTGGTAGATGA
 
. : . : . : . : . : . :
JMFF025M11+ GCCTGCACAGCCAGTAACACAAATCCAGAAAGCTCTATGAACCCAAAGATGAGCATGGTC
JMFF013P22+ GCCTGCACAGCCAGTAACACAAATCCAGAAAGCTCTATGAACCCAAAGATGAGCATGGTC
                      ____________________________________________________________
consensus GCCTGCACAGCCAGTAACACAAATCCAGAAAGCTCTATGAACCCAAAGATGAGCATGGTC
 
. : . : . : . : . : . :
JMFF025M11+ CAGAAGCTGCCCAGATAGGAATCAGAGAGGAAGCCACCAAAGAGGGAGAGGAGGAAGACA
JMFF013P22+ CAGAAGCTGCCCAGATAGGAATCAGAGAGGAAGCCACCAAAGAGGGAGAGGAGGAAGACA
                      ____________________________________________________________
consensus CAGAAGCTGCCCAGATAGGAATCAGAGAGGAAGCCACCAAAGAGGGAGAGGAGGAAGACA
 
. : . : . : . : . : . :
JMFF025M11+ GTGCCAATGAAGTTTGTGACTATGTTTGCAGATTTTGAGAGAGGGAAATGCATGTCATTG
JMFF013P22+ GTGCCAATGAAGTTTGTGACTATGTTTGCAGATTTTGAGAGAGGGAAATGCATGTCATTG
                      ____________________________________________________________
consensus GTGCCAATGAAGTTTGTGACTATGTTTGCAGATTTTGAGAGAGGGAAATGCATGTCATTG
 
. : . : . : . : . : . :
JMFF025M11+ AAGACATAAGTGATGAGGTTGTTCCCAACAGCTGCTATCGCCATCATCTCGAACGACATC
JMFF013P22+ AAGACATAAGTGATGAGGTTGTTCCCAACAGCTGCTATCGCCATCATCTCGAACGACATC
                      ____________________________________________________________
consensus AAGACATAAGTGATGAGGTTGTTCCCAACAGCTGCTATCGCCATCATCTCGAACGACATC
 
. : . : . : . : . : . :
JMFF025M11+ AGGCCTAGTACAAAAACAGCAGCAGCCATGCCACCATGTTTGTCATCCCTGCAAGGTCTG
JMFF013P22+ AGGCCTAGTACAAAAACAGCAGCAGCCATGCCACCATGTTTGTCATCCCTGCAAGGTCTG
                      ____________________________________________________________
consensus AGGCCTAGTACAAAAACAGCAGCAGCCATGCCACCATGTTTGTCATCCCTGCAAGGTCTG
 
. : . : . : . : . : . :
JMFF025M11+ CCCTTCCAATCAACAGACACTTCCTGGGAATCCTCAGACTCCCCTCTGGAACCTACCTTT
JMFF013P22+ CCCTTCCAATCAACAGACACTTCCTGGGAATCCTCAGACTCCCCTCTGGAACCTACCTTT
                      ____________________________________________________________
consensus CCCTTCCAATCAACAGACACTTCCTGGGAATCCTCAGACTCCCCTCTGGAACCTACCTTT
 
. : . : . : . : . : . :
JMFF025M11+ TTGGTCCCCCCTCTGTCCATTACCAACAACCTTGGGAAGTTGGGAGTTTTCTAACAGGTG
JMFF013P22+ TTGGTCCCCCCTCTGTCCATTACCAACAACCTTGGGAAGTTGGGAGTTTTCTAACAGGTG
                      ____________________________________________________________
consensus TTGGTCCCCCCTCTGTCCATTACCAACAACCTTGGGAAGTTGGGAGTTTTCTAACAGGTG
 
. : . : . : . : . : . :
JMFF025M11+ GAAACAATGTCTGTGTGTGGGTGTGTTGTTTCTTTGATGACAGAATCTGTCAGAACAACA
JMFF013P22+ GAAACAATGTCTGTGTGTGGGTGTGTTGTTTCTTTGATGACAGAATCTGTCAGAACAACA
                      ____________________________________________________________
consensus GAAACAATGTCTGTGTGTGGGTGTGTTGTTTCTTTGATGACAGAATCTGTCAGAACAACA
 
. : . : . : . : . : . :
JMFF025M11+ TAGTCTACTTGAGTTTCTCAGAAACCTAAAAAGTTTGTCTTTCTTTGGTGATTCTGATGC
JMFF013P22+ TAGTCTACTTGAGTTTCTCAGAAACCTAAAAAGTTTGTCTTTCTTTGGTGATTCTGATGC
                      ____________________________________________________________
consensus TAGTCTACTTGAGTTTCTCAGAAACCTAAAAAGTTTGTCTTTCTTTGGTGATTCTGATGC