| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF011J15 | Sequence | 519 | 000610 (5) | pir|S51946|S51946 | 1e-05 | pyruvate kinase (EC 2.7.1.40) A, chloroplast - common tobacco | 695 | 010755 (5) | pir|S51946|S51946 | 1e-97 | pyruvate kinase (EC 2.7.1.40) A, chloroplast - common tobacco |
| JMFF045B21 | Sequence | 637 | 000610 (5) | pir|S51946|S51946 | 7e-27 | pyruvate kinase (EC 2.7.1.40) A, chloroplast - common tobacco | 621 | 010755 (5) | pir|S51946|S51946 | 4e-81 | pyruvate kinase (EC 2.7.1.40) A, chloroplast - common tobacco |
| JMFF047J22 | Sequence | 558 | 000610 (5) | pir|S51946|S51946 | 2e-29 | pyruvate kinase (EC 2.7.1.40) A, chloroplast - common tobacco | 522 | 010755 (5) | pir|S51946|S51946 | 8e-66 | pyruvate kinase (EC 2.7.1.40) A, chloroplast - common tobacco |
| JMFF048B03 | Sequence | 391 | 000610 (5) | pir|S51946|S51946 | 2e-08 | pyruvate kinase (EC 2.7.1.40) A, chloroplast - common tobacco | 253 | 010755 (5) | gb:AY085149_1570230 | 3e-17 | Arabidopsis thaliana clone 13351 mRNA, complete sequence. |
| JMSF008D15 | Sequence | 242 | 000610 (5) | 774 | 010755 (5) | pir|S51946|S51946 | e-115 | pyruvate kinase (EC 2.7.1.40) A, chloroplast - common tobacco | |||
This contig is upended
. : . : . : . : . : . :
JMFF047J22+ AGCCACGTTCATCCCGCCGACGGCCAACGCCTCGAGCTGCTCGAACCCGCAGG
JMFF045B21+ ATCCCGCCGACGGCCAACGCCTCGAGCTGCTCGAACCCGCAGG
____________________________________________________________
consensus AGCCACGTTCATCCCGCCGACGGCCAACGCCTCGAGCTGCTCGAACCCGCAGG
. : . : . : . : . : . :
JMFF047J22+ TGGCGGGCCCAATGGTGCACACCAGCTTAGTCCGCCTCGTGCTCCGGAACCCATTCTCTT
JMFF045B21+ TGGCGGGCCCAATGGTGCACACCAGCTTAGTCCGCCTCGTGCTCCGGAACCCATTCTCTT
____________________________________________________________
consensus TGGCGGGCCCAATGGTGCACACCAGCTTAGTCCGCCTCGTGCTCCGGAACCCATTCTCTT
. : . : . : . : . : . :
JMFF047J22+ TCAGCTCCGCCTCCGTCACCGCGTCCACGTCAATCGCCGCCAGCTCCTGCGTCGCAGCGG
JMFF045B21+ TCAGCTCCGCCTCCGTCACCGCGTCCACGTCAATCGCCGCCAGCTCNTGCGTCGCAGCGG
JMFF048B03+ CGG
JMFF011J15+ CGTCCACGTCAATCGCCGCCAGCTCCTGCGTCGCAGCGG
____________________________________________________________
consensus TCAGCTCCGCCTCCGTCACCGCGTCCACGTCAATCGCCGCCAGCTCCTGCGTCGCAGCGG
. : . : . : . : . : . :
JMFF047J22+ ATACCGCCCCCGCCCCGCCGGAGCCATTATCCGAGACCAGCACACGGGAGGACCGCAAAT
JMFF045B21+ ATACCGCCCCCGCCCCGCCGGAGCCATTATCCGAGACCAGCACACGGGAGGACCGCAAAT
JMFF048B03+ ATACCGCCCCCGCCCCGCCGGAGCCATTATCCGAGACCAGCACACGGGAGGACCGCAAAT
JMFF011J15+ ATACCGCCCCCGCCCCGCCGGAGCCATTATCCGAGACCAGCACACGGGAGGACCGCAAAT
____________________________________________________________
consensus ATACCGCCCCCGCCCCGCCGGAGCCATTATCCGAGACCAGCACACGGGAGGACCGCAAAT
. : . : . : . : . : . :
JMFF047J22+ CGAGATCTGAATTCGAAGCTCTGACGACGAACGACCGCGCCGGAGCCTTCGCCGGGACCC
JMFF045B21+ CGAGATCTGAATTCGAAGCTCTGACGACGAACGACCGCGCCGGAGCCTTCGCCGGGACCC
JMFF048B03+ CGAGATCTGAATTCGAAGCTCTGACGACGAACGACCGCGCCGGAGCCTTCGCCGGGACCC
JMSF008D15+ GACGACGAACGACCGCGCCGGAGCNTTCGCCGGGACCC
JMFF011J15+ CGAGATCTGAATTCGAAGCTCTGACGACGAACGACCGCGCCGGAGCCTTCGCCGGGACCC
____________________________________________________________
consensus CGAGATCTGAATTCGAAGCTCTGACGACGAACGACCGCGCCGGAGCCTTCGCCGGGACCC
. : . : . : . : . : . :
JMFF047J22+ GGAACCCCCGGGCCGGAGCAAACGACAGAGAAGGCTTGGAAACTGCAAATCCCGGCAGCG
JMFF045B21+ GGAACCCCCGGGCCGGAGCAAACGACAGAGAAGGCTTGGAAACTGCAAATCCCGGCAGCG
JMFF048B03+ GGAACCCCCGGGCCGGAGCAAACGACAGAGAAGGCTTGGAAACTGCAAATCCCGGCAGCG
JMSF008D15+ GGAACCCCCGGGCCGGAGCAAACGACAGAGAAGGCTTGGAAACTGCAAATCCCGGCAGCG
JMFF011J15+ GGAACCCCCGGGCCGGAGCAAACGACAGAGAAGGCTTGGAAACTGCAAATCCCGGCAGCG
____________________________________________________________
consensus GGAACCCCCGGGCCGGAGCAAACGACAGAGAAGGCTTGGAAACTGCAAATCCCGGCAGCG
. : . : . : . : . : . :
JMFF047J22+ ATGCAGAAGAGGAGGAGACAAAGAAGTTGAGAGCTCGCGACATTTTGCCCGGAAACCTCA
JMFF045B21+ ATGCAGAAGAGGAGGAGACAAAGAAGTTGAGAGCTCGCGACATTTTGCCCGGAAACCTCA
JMFF048B03+ ATGCAGAAGAGGAGGAGACAAAGAAGTTGAGAGCTCGCGACATTTTGCCCGGAAACCTCA
JMSF008D15+ ATGCAGAAGAGGAGGAGACAAAGAAGTTGAGAGCTCGCGACATTTTGCCCGGAAACCTCA
JMFF011J15+ ATGCAGAAGAGGAGGAGACAAAGAAGTTGAGAGCTCGCGACATTTTGCCCGGAAACCTCA
____________________________________________________________
consensus ATGCAGAAGAGGAGGAGACAAAGAAGTTGAGAGCTCGCGACATTTTGCCCGGAAACCTCA
. : . : . : . : . : . :
JMFF047J22+ ACAACTACCGGTTATCCGGCGGAGTATCTGAGAAACCCAGAAATTGAGCCAATGATGGGA
JMFF045B21+ ACAACTACCGGTTATCCGGCGGAGTATCTGAGAAACCCAGAAATTGAGCCAATGATGGGA
JMFF048B03+ ACAACTACCGGTTATCCGGCGGAGTATCTGAGAAACCCAGAAATTGAGCCAATGATGGGA
JMSF008D15+ ACAACTACCGGTTATCCGGCGGAGTATCTGAGAAACCCAGAAATTGAGCCAATGATGGGA
JMFF011J15+ ACAACTACCGGTTATCCGGCGGAGTATCTGAGAAACCCAGAAATTGAGCCAATGATGGGA
____________________________________________________________
consensus ACAACTACCGGTTATCCGGCGGAGTATCTGAGAAACCCAGAAATTGAGCCAATGATGGGA
. : . : . : . : . : . :
JMFF047J22+ GTTGAAACGACAGAGAAAAATGCGGGGCTGAGATGGCGAACTCAAGGCAAGAAAAAGGGG
JMFF045B21+ GTTGAAACGACAGAGAAAAATGCGGGGCTGAGATGGCGAACTCAAGGCAAGAAAAAGGGG
JMFF048B03+ GTTGAAACGACAGAGAAAAATGCGGGGCTGAGATGGCGAACTCAAGGCAAGAAAAAGGGG
JMSF008D15+ GTTGAAACGACAGAGAAAAATGC
JMFF011J15+ GTTGAAACGACAGAGAAAAATGCGGGGCTGAGATGGCGAACTCAAGGCAAGAAAAAGGGG
____________________________________________________________
consensus GTTGAAACGACAGAGAAAAATGCGGGGCTGAGATGGCGAACTCAAGGCAAGAAAAAGGGG
. : . : . : . : . : . :
JMFF047J22+ GGGGACGTGAGTGTCAATGTTC
JMFF045B21+ GGGGACGTGAGTGTCAATGTTCGACAATTTTGAGGTTCTTCTTCCCCAACCAGCGGAGTA
JMFF048B03+ GGGGACGTGAGTGTCAATGTTC
JMFF011J15+ GGGGACGTGAGTGTCAATGTTCGACAATTTTGAGGTTCTTCTTCCCCAACCAGCGGAGTA
____________________________________________________________
consensus GGGGACGTGAGTGTCAATGTTCGACAATTTTGAGGTTCTTCTTCCCCAACCAGCGGAGTA
. : . : . : . : . : . :
JMFF045B21+ TACTATGCTTTCAGCGACATTGATAGTTGATACTGTTGGGAATGTGATGGACAC
JMFF011J15+ TACTATGCTTTCAGCGACATTGATAGTTGATACTGTTGGGAATGTGATGGACACCGATGA
____________________________________________________________
consensus TACTATGCTTTCAGCGACATTGATAGTTGATACTGTTGGGAATGTGATGGACACCGATGA