clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF011G07 | Sequence | 328 | 000600 (3) | gb:AB023041_1515466 | 4e-11 | Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MPE11. | 572 | 008708 (3) | gb:AY035031_1559809 | 2e-57 | Arabidopsis thaliana unknown protein (At3g26100) mRNA, complete cds.>gb:AY059105 |
JMFF020O02 | Sequence | 427 | 000600 (3) | gb:AB023041_1515466 | 6e-28 | Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MPE11. | 634 | 008708 (3) | gb:AY035031_1559809 | 3e-71 | Arabidopsis thaliana unknown protein (At3g26100) mRNA, complete cds.>gb:AY059105 |
JMFS147F02 | Sequence | 607 | 000600 (3) | gb:AB023041_1515466 | 1e-20 | Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MPE11. |
This contig is upended
. : . : . : . : . : . :
JMFS147F02+ AACGAACAAGTGGCCTGCAAAACCGCATTATATAATTCAAA
____________________________________________________________
consensus AACGAACAAGTGGCCTGCAAAACCGCATTATATAATTCAAA
. : . : . : . : . : . :
JMFS147F02+ TCAGCAGCAACATCAATTCTCAAGCCAAACATAGTTCGCTTCGAAGATACTAAAAGGTAG
____________________________________________________________
consensus TCAGCAGCAACATCAATTCTCAAGCCAAACATAGTTCGCTTCGAAGATACTAAAAGGTAG
. : . : . : . : . : . :
JMFS147F02+ AAACACATGCCTCTAGTATCGCGAGGTCCTGTGGATCCAAATTACACCCAGTAAGGACAT
____________________________________________________________
consensus AAACACATGCCTCTAGTATCGCGAGGTCCTGTGGATCCAAATTACACCCAGTAAGGACAT
. : . : . : . : . : . :
JMFS147F02+ GAAGGACAATGGAGGGGTTGGCAGACAACGGGAACTCCCCGGGACGAGCGTTTCCAAGAC
____________________________________________________________
consensus GAAGGACAATGGAGGGGTTGGCAGACAACGGGAACTCCCCGGGACGAGCGTTTCCAAGAC
. : . : . : . : . : . :
JMFS147F02+ AATGCCTCTGTTGCTTTTGAAACGTGGGCACGGGAGAGGTGACGAGAGTAGCAATGGGTT
____________________________________________________________
consensus AATGCCTCTGTTGCTTTTGAAACGTGGGCACGGGAGAGGTGACGAGAGTAGCAATGGGTT
. : . : . : . : . : . :
JMFS147F02+ GCTCGGCTATGTTACAGTATTGAACACTCGGGGTTCCACTCGCTGTGGTGTCCATGGGCA
____________________________________________________________
consensus GCTCGGCTATGTTACAGTATTGAACACTCGGGGTTCCACTCGCTGTGGTGTCCATGGGCA
. : . : . : . : . : . :
JMFS147F02+ CTGCTCTACTCTGCAGTGCCCTAATCGAGCAGGGGAGACGAAGATCTCAACTTGTTCTTA
____________________________________________________________
consensus CTGCTCTACTCTGCAGTGCCCTAATCGAGCAGGGGAGACGAAGATCTCAACTTGTTCTTA
. : . : . : . : . : . :
JMFS147F02+ AACTAAAAGCTGATAGAATAACTTGCAGCTTCAATCATTAAACAGAGACCGCAAGATTCC
JMFF020O02+ CATTAAACAGAGACCGCAAGATTCC
JMFF011G07+ CATTAAACAGAGACCGCAAGATTCC
____________________________________________________________
consensus AACTAAAAGCTGATAGAATAACTTGCAGCTTCAATCATTAAACAGAGACCGCAAGATTCC
. : . : . : . : . : . :
JMFS147F02+ TCAAAACCCATGCGAAATCTT-CCCAAAACTTTCTGCCTTTGTTTGTAAAATCACCAAAA
JMFF020O02+ TCAAAACCCATGCGAAATCTT-CCCAAAATTTTNTGCCTTTGTTTGTAAAATCACCAAAA
JMFF011G07+ TCAAAACCCATGCGAAATCTTNCCCAAAATTTTCTGCCTTTGTTTGTAAAATCACCAAAA
____________________________________________________________
consensus TCAAAACCCATGCGAAATCTT-CCCAAAATTTTCTGCCTTTGTTTGTAAAATCACCAAAA
. : . : . : . : . : . :
JMFS147F02+ ATCTGTGCAATTCTAATCAAGCACAAGTGAGTAATAGTCAGATCAAAGGGTCAATAGAAG
JMFF020O02+ ATCTGTGCAATTCTAATCAAGCACAAGTGAGTAATAGTCAGATCAAAGGGTCAATAGAAG
JMFF011G07+ ATCTGTGCAATTCTAATCAAGCACAAGTGAGTAATAGTCAGATCAAAGGGTCAATAGAAG
____________________________________________________________
consensus ATCTGTGCAATTCTAATCAAGCACAAGTGAGTAATAGTCAGATCAAAGGGTCAATAGAAG
. : . : . : . : . : . :
JMFS147F02+ AAAAAGAGACC-TGACAGAGAAGTTTTA
JMFF020O02+ AAAAAGAGACCNTGACAGAGAAGTTTTAGAGAGAGAGAGAGAGGAGGAGAAGTTTTATAT
JMFF011G07+ AAAAAGAGACCTTGACAGAGAAGTTTTAGAGAGAGAGAGAGAGGAGGAGAAGTTTTATAT
____________________________________________________________
consensus AAAAAGAGACCTTGACAGAGAAGTTTTAGAGAGAGAGAGAGAGGAGGAGAAGTTTTATAT