Previous Contig 000524:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006O04Sequence621000524 (4)gb:AF417576_17982958e-78Euphorbia esula growth-on protein GRO10 (Gro10) mRNA, complete cds.785009723 (4)gb:AF417576_1798295e-101Euphorbia esula growth-on protein GRO10 (Gro10) mRNA, complete cds.
JMFF009N22Sequence544000524 (4)gb:AF417576_17982951e-53Euphorbia esula growth-on protein GRO10 (Gro10) mRNA, complete cds.251009723 (4)pir|D86147|D861475e-05T1N6.3 protein - Arabidopsis thaliana>gb:AE005172_889213 Arabidopsis thaliana ch
JMFF032J02Sequence528000524 (4)gb:AF417576_17982951e-50Euphorbia esula growth-on protein GRO10 (Gro10) mRNA, complete cds.688009723 (4)gb:AF417576_17982957e-86Euphorbia esula growth-on protein GRO10 (Gro10) mRNA, complete cds.
JMFF033P07Sequence569000524 (4)gb:AF417576_17982951e-59Euphorbia esula growth-on protein GRO10 (Gro10) mRNA, complete cds.788009723 (4)gb:AF417576_1798295e-101Euphorbia esula growth-on protein GRO10 (Gro10) mRNA, complete cds.

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF006O04+ TGGAGAGTAAAGCTGCA
                      ____________________________________________________________
consensus TGGAGAGTAAAGCTGCA
 
. : . : . : . : . : . :
JMFF006O04+ CAGTAACTGATGAATTACTCGATAGCATTTTCTCCAAAGTTGCACCAGCATCTTGGGGAA
                      ____________________________________________________________
consensus CAGTAACTGATGAATTACTCGATAGCATTTTCTCCAAAGTTGCACCAGCATCTTGGGGAA
 
. : . : . : . : . : . :
JMFF006O04+ GCATGACAGCAGGTATCTTTATATCTAGGTCAGTTTCATCAGGATCACAAACCATCTTGT
JMFF033P07+ AGTTTCATCAGGATCACAAACCATCTTGT
JMFF009N22+ GT
                      ____________________________________________________________
consensus GCATGACAGCAGGTATCTTTATATCTAGGTCAGTTTCATCAGGATCACAAACCATCTTGT
 
. : . : . : . : . : . :
JMFF006O04+ AAAGTTCTTTTTGGTTGTTTATTATAAGGACTGCTGAAGCCCCAGCAGCTTCTGCATAAT
JMFF033P07+ AAAGTTCTTTTTGGTTGTTTATTATAAGGACTGCTGAAGCCCCAGCAGCTTCTGCATAAT
JMFF032J02+ GGTTGTTTATTATAAGGACTGCTGAAGCCCCAGCAGCTTCTGCATAAT
JMFF009N22+ AAAGTTCTTTTTGGTTGTTTATTATAAGGACTGCTGAAGCCCCAGCAGCTTCTGCATAAT
                      ____________________________________________________________
consensus AAAGTTCTTTTTGGTTGTTTATTATAAGGACTGCTGAAGCCCCAGCAGCTTCTGCATAAT
 
. : . : . : . : . : . :
JMFF006O04+ TAGCTTTTGCAGTGAATTTGCAGTTTCCTCGATCTACCATGATGACATCTCCAGCAAGCT
JMFF033P07+ TAGCTTTTGCAGTGAATTTGCAGTTTCCTCGATCTACCATGATGACATCTCCAGCAAGCT
JMFF032J02+ TAGCTTTTGCAGTGAATTTGCAGTTTCCTCGATCTACCATGATGACATCCCCAGCAAGCT
JMFF009N22+ TAGCTTTTGCAGTGAATTTGCAGTTTCCTCGATCTACCATGATGACATCTCCAGCAAGCT
                      ____________________________________________________________
consensus TAGCTTTTGCAGTGAATTTGCAGTTTCCTCGATCTACCATGATGACATCTCCAGCAAGCT
 
. : . : . : . : . : . :
JMFF006O04+ TGTTCTTTGGAGTACTGCAACAGTCTCGAGGGTTTGACCGAGTTAGAAGAGTTTGATGTG
JMFF033P07+ TGTTCTTTGGAGTACTGCAACAGTCTCGAGGGTTTGACCGAGTTAGAAGAGTTTGATGTG
JMFF032J02+ TGTTCTTTGGAGTACTGCAACAGTCTCGAGGGTTTGACCGAGTTAGAAGAGTTTGATGTG
JMFF009N22+ TGTTCTTTGGAGTACTGCAACAGTCTCGAGGGTTTGACCGAGTTAGAAGAGTTTGATGTG
                      ____________________________________________________________
consensus TGTTCTTTGGAGTACTGCAACAGTCTCGAGGGTTTGACCGAGTTAGAAGAGTTTGATGTG
 
. : . : . : . : . : . :
JMFF006O04+ CATTTTTCTCCTTCGACACAATTGTAGTGCCAAATCTAGCACCAACACCAACAAACTCAG
JMFF033P07+ CATTTTTCTCCTTCGACACAATTGTAGTGCCAAATCTAGCACCAACACCAACAAACTCAG
JMFF032J02+ CATTTTTCTCCTTCGACACAATTGTAGTGCCAAATCTAGCACCAACACCAACAAACTCAG
JMFF009N22+ CATTTTTCTCCTTCGACACAATTGTAGTGCCAAATCTAGCACCAACACCAACAAACTCAG
                      ____________________________________________________________
consensus CATTTTTCTCCTTCGACACAATTGTAGTGCCAAATCTAGCACCAACACCAACAAACTCAG
 
. : . : . : . : . : . :
JMFF006O04+ CATCTTCTACCCCATCAACCCATGTTTGAATTTTCACCAGCACAAAATCATTCTCACAGC
JMFF033P07+ CATCTTCTACCCCATCAACCCATGTTTGAATTTTCACCAGCACAAAATCATTCTCACAGC
JMFF032J02+ CATCTTCTACCCCATCAACCCATGTTTGAATTTTCACCAGAACAAAATCATTCTCACAGC
JMFF009N22+ CATCTTCTACCCCATCAACCCATGTTTGAATTTTCACCAGCACAAAATCATTCTCACAGC
                      ____________________________________________________________
consensus CATCTTCTACCCCATCAACCCATGTTTGAATTTTCACCAGCACAAAATCATTCTCACAGC
 
. : . : . : . : . : . :
JMFF006O04+ CGGGCTTTTTGGGGGCTAAATCGTCGTGATGAACAATGTCACCGGCGGTCACTGCAGATG
JMFF033P07+ CGGGCTTTTTGGGGGCTAAATCGTCGTGATGAACAATGTCACCGGCGGTCACTGCAGATG
JMFF032J02+ CGGGCTTTTTGGGGGCTAAATCGTCGTGATGAACAATGTCACCGGCGGTCACTGCAGATG
JMFF009N22+ CGGGCTTTTTGGGGGCTAAATCGTCGTGATGAACAATGTCACCGGCGGTCACTGCAGATG
                      ____________________________________________________________
consensus CGGGCTTTTTGGGGGCTAAATCGTCGTGATGAACAATGTCACCGGCGGTCACTGCAGATG
 
. : . : . : . : . : . :
JMFF006O04+ GGATGCTGAAGACTACCACCAGCACTGAAACTAGGCAAATTAAGCAGCTAATCTTCCCAA
JMFF033P07+ GGATGCTGAAGACTACCACCAGCACTGAAACTAGGCAAATTAAGCAGCTAATCTTCCCAA
JMFF032J02+ GGATGCTGAAGACTACCACCAGCACTGAAACTAGGCAAATTAAGCAGCTAATCTTCCCAA
JMFF009N22+ GGATGCTGAAGACTACCACCAGCACTGAAACTAGGCAAATTAAGCAGCTAATCTTCCCAA
                      ____________________________________________________________
consensus GGATGCTGAAGACTACCACCAGCACTGAAACTAGGCAAATTAAGCAGCTAATCTTCCCAA
 
. : . : . : . : . : . :
JMFF006O04+ AATCCATCGGATTTCAGAAGCTCTGTAAATATCAAACGCATACATAAACAGTAAAATT
JMFF033P07+ AATCCATCGGATTTCAGAAGCTCTGTAAATATCAAACGCATACATAAACAGTAAAATTTG
JMFF032J02+ AATCCATCGGATTTCAGAAGCTCTGTAAATATCAAACGCATACATAAACAGTAAAATTCG
JMFF009N22+ AATCCATCGGATTTCAGAAGCTCTGTAAATATCAAACGCATACATAAACAGTAAAATTCG
                      ____________________________________________________________
consensus AATCCATCGGATTTCAGAAGCTCTGTAAATATCAAACGCATACATAAACAGTAAAATTCG
 
. : . : . : . : . : . :
JMFF033P07+ TGTGTATGTATAGAAAGAGGAAGAATTAAAAAGCACTTCTCCTTCTTCTGTGTCAATAAT
JMFF032J02+ TGTGTATGTATAGAAAGAGGAAGAATTAAAAAGCACTTCTCCTTCTTCTGTGTCAATAAT
JMFF009N22+ TGTGTATGTATAGAAAGAGGAAGAATTAAAAAGCACTTCTCCTTCTTCTGTGTCAATAAT
                      ____________________________________________________________
consensus TGTGTATGTATAGAAAGAGGAAGAATTAAAAAGCACTTCTCCTTCTTCTGTGTCAATAAT