| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF008P20 | Sequence | 575 | 000468 (2) | gb:AB084464_1524342 | 6e-64 | Pyrus communis PC-EG2 mRNA for endo-1,4-beta-D-glucanase, complete cds. | 695 | 009905 (3) | gb:AF098292_1767912 | 3e-41 | Lycopersicon esculentum endo-beta-1,4-D-glucanase (Cel8) mRNA, complete cds. |
| JMFF036G16 | Sequence | 582 | 000468 (2) | gb:AB084464_1524342 | 9e-65 | Pyrus communis PC-EG2 mRNA for endo-1,4-beta-D-glucanase, complete cds. | 697 | 009905 (3) | gb:AF098292_1767912 | 3e-41 | Lycopersicon esculentum endo-beta-1,4-D-glucanase (Cel8) mRNA, complete cds. |
This contig is upended
. : . : . : . : . : . :
JMFF036G16+ TCCGCATATCCACTAACGGATTGGTAGTATCTCTGTGCGACG
JMFF008P20+ ATCCACTAACGGATTGGTAGTATCTCTGTGCGACG
____________________________________________________________
consensus TCCGCATATCCACTAACGGATTGGTAGTATCTCTGTGCGACG
. : . : . : . : . : . :
JMFF036G16+ GTTATGCTGCTGTCATATTTGCCCCGGTACTTGTCCGCAAACTCAAACAGCTGGTAGGCG
JMFF008P20+ GTTATGCTGCTGTCATATTTGCCCCGGTACTTGTCCGCAAACTCAAACAGCTGGTAGGCG
____________________________________________________________
consensus GTTATGCTGCTGTCATATTTGCCCCGGTACTTGTCCGCAAACTCAAACAGCTGGTAGGCG
. : . : . : . : . : . :
JMFF036G16+ TGCTGGAGCAGCTCATTGGAGTAGGAAGGGTTGGAGCGGCGGAAGACGATGGATGCGGCG
JMFF008P20+ TGCTGGAGCAGCTCATTGGAGTAGGAAGGGTTGGAGCGGCGGAAGACGATGGATGCGGCG
____________________________________________________________
consensus TGCTGGAGCAGCTCATTGGAGTAGGAAGGGTTGGAGCGGCGGAAGACGATGGATGCGGCG
. : . : . : . : . : . :
JMFF036G16+ GCCATGGCGGCGGCGGTCTCGCCGGCGAGGTCTGATCCCGGCCGGCTTGGGTCGATCTTG
JMFF008P20+ GCCATGGCGGCGGCGGTCTCGCCGGCGAGGTCTGATCCCGGCCGGCTTGGGTCGATCTTG
____________________________________________________________
consensus GCCATGGCGGCGGCGGTCTCGCCGGCGAGGTCTGATCCCGGCCGGCTTGGGTCGATCTTG
. : . : . : . : . : . :
JMFF036G16+ TAAGCCGTCCTTGAAGTCGTCATGTCCTCCGGCCTCTGCCAGCAGAAATGGTCGGTTCAC
JMFF008P20+ TAAGCCGTCCTTGAAGTCGTCATGTCCTCCGGCCTCTGCCAGCAGAAATGGTCGGTTCAC
____________________________________________________________
consensus TAAGCCGTCCTTGAAGTCGTCATGTCCTCCGGCCTCTGCCAGCAGAAATGGTCGGTTCAC
. : . : . : . : . : . :
JMFF036G16+ CATCTCCCACCTCTCCATAGAGGACGTTGGGTTCAGGGTGAGCTTTGATGAAGTAGTCGG
JMFF008P20+ CATCTCCCACCTCTCCATAGAGGACGTTGGGTTCAGGGTGAGCTTTGATGAAGTAGTCGG
____________________________________________________________
consensus CATCTCCCACCTCTCCATAGAGGACGTTGGGTTCAGGGTGAGCTTTGATGAAGTAGTCGG
. : . : . : . : . : . :
JMFF036G16+ TGCCCCACTTAACGGCGTCCATGGCGTGGCCAAGCTCCCCACTGGCCGCCATTTGTTTGC
JMFF008P20+ TGCCCCACTTAACGGCGTCCATGGCGTGGCCAAGCTCCCCACTGGCCGCCATTTGTTTGC
____________________________________________________________
consensus TGCCCCACTTAACGGCGTCCATGGCGTGGCCAAGCTCCCCACTGGCCGCCATTTGTTTGC
. : . : . : . : . : . :
JMFF036G16+ CATATTCGATGATACTCCAGGACATCATAGATCCTGATCTTTGGATCTGGCACACCACGG
JMFF008P20+ CATATTCGATGATACTCCAGGACATCATAGATCCTGATCTTTGGATCTGGCACACCACGG
____________________________________________________________
consensus CATATTCGATGATACTCCAGGACATCATAGATCCTGATCTTTGGATCTGGCACACCACGG
. : . : . : . : . : . :
JMFF036G16+ CAGTACCTTGATTTCGGGTAAGGCTTGTTCTTAATCTGACGGTAACACCTTGCTGGTCTT
JMFF008P20+ CAGTACCTTGATTTCGGGTAAGGCTTGTTCTTAATCTGACGGTAACACCTTGCTGGTCTT
____________________________________________________________
consensus CAGTACCTTGATTTCGGGTAAGGCTTGTTCTTAATCTGACGGTAACACCTTGCTGGTCTT
. : . : . : . : . : . :
JMFF036G16+ CTTCCCATGGCGACGTCTGCTTGCGGCTCGGCTGATCTGCGGCAAATCGAAGTGAAAAAC
JMFF008P20+ CTTCCCATGGCGACGTCTGCTTGCGGCTCGGCTGATCTGCGGCAAATCGAAGTGAAAAAC
____________________________________________________________
consensus CTTCCCATGGCGACGTCTGCTTGCGGCTCGGCTGATCTGCGGCAAATCGAAGTGAAAAAC