Contig 014138:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMCP008H09Sequence424014138 (2)ref|XP_006470496.1|86.7PREDICTED: uncharacterized protein LOC102617255 [Citrus sinensis]
JMCP008H10Sequence445014138 (2)ref|XP_006470496.1|94.7PREDICTED: uncharacterized protein LOC102617255 [Citrus sinensis]

Alignment

This contig is upended


. : . : . : . : . : . :
JMCP008H09+ AGAGAAATGAAGAtgaAATATATT
JMCP008H10+ CAGAGAAATGAAGAACTAATATATT
                      ____________________________________________________________
consensus CAGAGAAATGAAGAACTAATATATT
 
. : . : . : . : . : . :
JMCP008H09+ AAACAATAGATGGAAtgcGAATAAAAAAATAGACCGAACAATCAGtCTTAAACAAGGTCT
JMCP008H10+ AAACAATAGATGGAAACGGAATAAAAAAATAGACCGAACAATCAGACTTAAACAAGGTCT
                      ____________________________________________________________
consensus AAACAATAGATGGAAACGGAATAAAAAAATAGACCGAACAATCAGACTTAAACAAGGTCT
 
. : . : . : . : . : . :
JMCP008H09+ CggaAGTTAGTAAGTGGGCAACgaTGTTCGCGGACCGCTTAGCAAACAAAAAGTTAATAT
JMCP008H10+ CCCTAGTTAGTAAGTGGGCAACCTTGTTCGCGGACCGCTTAGCAAACAAAAAGTTAATAT
                      ____________________________________________________________
consensus CCCTAGTTAGTAAGTGGGCAACCTTGTTCGCGGACCGCTTAGCAAACAAAAAGTTAATAT
 
. : . : . : . : . : . :
JMCP008H09+ TCAAAAAGTCTTTAcgTAATTCCTTAACATgtaTAATGATGAGATCAAAAGAGGAGTAGA
JMCP008H10+ TCAAAAAGTCTTTAGCTAATTCCTTAACATCATTAATGATGAGATCAAAAGAGGAGTAGA
                      ____________________________________________________________
consensus TCAAAAAGTCTTTAGCTAATTCCTTAACATCATTAATGATGAGATCAAAAGAGGAGTAGA
 
. : . : . : . : . : . :
JMCP008H09+ GgaGCAGgacTATGAAGTCAataaGGAGATCCTTAATCCACTTTAAAGCgTCCCTTtgag
JMCP008H10+ GCTGCAGCTGTATGAAGTCATATTGGAGATCCTTAATCCACTTTAAAGCCTCCCTTACTC
                      ____________________________________________________________
consensus GCTGCAGCTGTATGAAGTCATATTGGAGATCCTTAATCCACTTTAAAGCCTCCCTTACTC
 
. : . : . : . : . : . :
JMCP008H09+ gatTAcgaTCAagaTggaacccaaaAAATAAGCCAGATATGGGAAaaaCCTaacCAGCCA
JMCP008H10+ CTATAGCTTCATCTTCCTTGGGTTTAAATAAGCCAGATATGGGAATTTCCTTTGCAGCCA
                      ____________________________________________________________
consensus CTATAGCTTCATCTTCCTTGGGTTTAAATAAGCCAGATATGGGAATTTCCTTTGCAGCCA
 
. : . : . : . : . : . :
JMCP008H09+ CAAATGaaggaTCAGCAagagaCAAAACAAAGCCCAcggggtaagaagacaatggtatta
JMCP008H10+ CAAATGTTCCTTCAGCATCTCTCAAAACAAAGCCCAGCCCCATTCTTCTGTTACCATAAT
                      ____________________________________________________________
consensus CAAATGTTCCTTCAGCATCTCTCAAAACAAAGCCCAGCCCCATTCTTCTGTTACCATAAT
 
. : . : . : . : . : . :
JMCP008H09+ ggttccgacgtTgttgtaattcgaattGCCAACCCAGAGG
JMCP008H10+ CCAAGGCTGCATCAACATTAAGCTTAAGCCAACCCAGAGGGGGTCTCTCCCATTTAGCAT
                      ____________________________________________________________
consensus CCAAGGCTGCATCAACATTAAGCTTAAGCCAACCCAGAGGGGGTCTCTCCCATTTAGCAT