Contig 014132:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF035D21Sequence697012093 (2)ref|XP_004253440.1|1e-71PREDICTED: probable inactive receptor kinase At4g23740, partial [Solanum lycope636014132 (2)emb|CDP05105.1|3e-77unnamed protein product [Coffea canephora]
JMSF052A23Sequence702012093 (2)ref|XP_006350601.1|4e-73PREDICTED: probable inactive receptor kinase At4g23740-like isoform X1 [Solanum864014132 (2)emb|CDP05105.1|1e-112unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF052A23+ ACTCCAAGGATGAAAAACTCATGG
                      ____________________________________________________________
consensus ACTCCAAGGATGAAAAACTCATGG
 
. : . : . : . : . : . :
rJMSF052A23+ TATATGATTACTACAGTCACGGGAGCATATCTGCTATGCTGCATGCTAAAAGAGAACAGG
                      ____________________________________________________________
consensus TATATGATTACTACAGTCACGGGAGCATATCTGCTATGCTGCATGCTAAAAGAGAACAGG
 
. : . : . : . : . : . :
rJMSF052A23+ GATGGATTCCTTTAGATTGGGAAACCCGTGTGCGAATCGCAATTGGTGCAGCCAGAGGTA
                      ____________________________________________________________
consensus GATGGATTCCTTTAGATTGGGAAACCCGTGTGCGAATCGCAATTGGTGCAGCCAGAGGTA
 
. : . : . : . : . : . :
rJMSF052A23+ TTGCCTACATCCATGGTCAGAGCGGAGGGAAGCTTGTCCATGGGAACATCAAATCATCAA
                      ____________________________________________________________
consensus TTGCCTACATCCATGGTCAGAGCGGAGGGAAGCTTGTCCATGGGAACATCAAATCATCAA
 
. : . : . : . : . : . :
rJMSF035D21+ TGAACACTACGGATGTGTATCTGATCTTGGCTTGGCAACACTGA
rJMSF052A23+ ACATCTTCCTCAACTCTGAACACTACGGATGTGTATCTGATCTTGGCTTGGCAACACTGA
                      ____________________________________________________________
consensus ACATCTTCCTCAACTCTGAACACTACGGATGTGTATCTGATCTTGGCTTGGCAACACTGA
 
. : . : . : . : . : . :
rJMSF035D21+ TAAGTCCAATTGGTCCACCCGTGAGGCGAACTGCAGGGTACCGTGCCCCAGAAGTTAAGG
rJMSF052A23+ TAAGTCCAATTGGTCCACCCGTGAGGCGAACTGCAGGGTACCGTGCCCCAGAAGTTAAGG
                      ____________________________________________________________
consensus TAAGTCCAATTGGTCCACCCGTGAGGCGAACTGCAGGGTACCGTGCCCCAGAAGTTAAGG
 
. : . : . : . : . : . :
rJMSF035D21+ ACACGAGAAAAGCAACACAGGAATCCGACGTCTACAGCTTCGGTGTCCTGCTGTTCGAAC
rJMSF052A23+ ACACGAGAAAAGCAACACAGGAATCCGACGTCTACAGCTTCGGTGTCCTGCTGTTCGAAC
                      ____________________________________________________________
consensus ACACGAGAAAAGCAACACAGGAATCCGACGTCTACAGCTTCGGTGTCCTGCTGTTCGAAC
 
. : . : . : . : . : . :
rJMSF035D21+ TTCTAACCAGAAAGTCCCCGACACACGCCATGGGCGGGAACGAGGTTGTCGACTTGGTAA
rJMSF052A23+ TTCTAACCAGAAAGTCCCCGACACACGCCATGGGCGGGAACGAGGTTGTCGACTTGGTAA
                      ____________________________________________________________
consensus TTCTAACCAGAAAGTCCCCGACACACGCCATGGGCGGGAACGAGGTTGTCGACTTGGTAA
 
. : . : . : . : . : . :
rJMSF035D21+ GATGGGTGCAGTCCGTGGTTCGTGAAGAGTGGACCGCAGAAGTGTTCGACGTCGAGCTTC
rJMSF052A23+ GATGGGTGCAGTCCGTGGTTCGTGAAGAGTGGACCGCAGAAGTGTTCGACGTCGAGCTTC
                      ____________________________________________________________
consensus GATGGGTGCAGTCCGTGGTTCGTGAAGAGTGGACCGCAGAAGTGTTCGACGTCGAGCTTC
 
. : . : . : . : . : . :
rJMSF035D21+ TGAAGTGTCCTAACATAGAGGAAGAAATGGTGGAGATGCTGCAAATAGGGATGAGCTGTG
rJMSF052A23+ TGAAGTGTCCTAACATAGAGGAAGAAATGGTGGAGATGCTGCAAATAGGGATGAGCTGTG
                      ____________________________________________________________
consensus TGAAGTGTCCTAACATAGAGGAAGAAATGGTGGAGATGCTGCAAATAGGGATGAGCTGTG
 
. : . : . : . : . : . :
rJMSF035D21+ TAGGCAGAATGGCAGAGCAGAGACCAAATATGTCAGATGTTGTGAAGATGGTAGAGGGCA
rJMSF052A23+ TAGGCAGAATGGCAGAGCAGAGACCAAATATGTCAGATGTTGTGAAGATGGTAGAGGGCA
                      ____________________________________________________________
consensus TAGGCAGAATGGCAGAGCAGAGACCAAATATGTCAGATGTTGTGAAGATGGTAGAGGGCA
 
. : . : . : . : . : . :
rJMSF035D21+ TTAGAAGAGTGAATACCGGAACCCAACCGTCCACAGAAGCTTCAACTCCCACCCTGATGA
rJMSF052A23+ TTAGAAGAGTGAATACCGGAACCCAACCGTCCACAGAAGCTTCAACTCCCACCCTGATGA
                      ____________________________________________________________
consensus TTAGAAGAGTGAATACCGGAACCCAACCGTCCACAGAAGCTTCAACTCCCACCCTGATGA
 
. : . : . : . : . : . :
rJMSF035D21+ CACCACCCATTCCGGACGCAGGATCATCTTCTTCACATCCACACTGATTTACTGTGTTCA
rJMSF052A23+ CACCACCCATTCCGGACGCAGGATCATCTTCTTCACATCCACACTGATTTACTGTGTTCA
                      ____________________________________________________________
consensus CACCACCCATTCCGGACGCAGGATCATCTTCTTCACATCCACACTGATTTACTGTGTTCA
 
. : . : . : . : . : . :
rJMSF035D21+ TGTTTTATAGGAAATATGTTTATTCAGCCCCAATTGTTTTATATACATCTTCGTCCACAT
rJMSF052A23+ TGTTTTATAGGAAATATGTTTATTCAGCCCCAATTGTTTTATATACATCTTCGTCCACAT
                      ____________________________________________________________
consensus TGTTTTATAGGAAATATGTTTATTCAGCCCCAATTGTTTTATATACATCTTCGTCCACAT
 
. : . : . : . : . : . :
rJMSF035D21+ CTAGTTTCCATTTTTTAAAGATAATTATTTGAAGTTTGT
rJMSF052A23+ CTAGTTTCCATTTTTTAAAGATAATTATTTGAAGTTTGTCCCATGTTGATTTACCTCTAA
                      ____________________________________________________________
consensus CTAGTTTCCATTTTTTAAAGATAATTATTTGAAGTTTGTCCCATGTTGATTTACCTCTAA