Contig 014119:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005K04Sequence271013558 (4)720014119 (4)gb|KDO70388.1|2e-94hypothetical protein CISIN_1g024548mg [Citrus sinensis]
JMFF007P16Sequence520013558 (4)ref|XP_011094340.1|4e-15PREDICTED: cell division protein FtsZ homolog 2-2, chloroplastic [Sesamum indic760014119 (4)gb|KDO70388.1|4e-100hypothetical protein CISIN_1g024548mg [Citrus sinensis]
JMFF033L22Sequence381014119 (4)ref|XP_006341140.1|3e-30PREDICTED: cell division protein FtsZ homolog 2-2, chloroplastic-like isoform X
JMSF049G22Sequence627013558 (4)ref|XP_011094340.1|3e-25PREDICTED: cell division protein FtsZ homolog 2-2, chloroplastic [Sesamum indic832014119 (4)gb|KDO70388.1|4e-61hypothetical protein CISIN_1g024548mg [Citrus sinensis]

Alignment

This contig is upended


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rJMFF007P16+                                                               TGATATA
                      ____________________________________________________________
consensus                                                                  TGATATA
 
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rJMFF005K04+                                        TTTGCCGATGTACGTGCTATTATGGAAAGT
rJMFF007P16+          ATAACGATTCCGGGATTGGTGAACGTAGATTTTGCCGATGTACGTGCTATTATGGAAAGT
                      ____________________________________________________________
consensus             ATAACGATTCCGGGATTGGTGAACGTAGATTTTGCCGATGTACGTGCTATTATGGAAAGT
 
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rJMFF005K04+          GCTGGTTCNTCATTAATGGGGATAGGAACTGCAACAGGGAAGACCAGAGCCAGAGATGCT
rJMFF007P16+          GCTGGTTCCTCATTAATGGGGATAGGAACTGCAACAGGGAAGACCAGAGCCAGAGATGCT
rJMSF049G22+                           GGGGATAGGAACTGCANCAGGGAAGACCAGAGCCAGAGATGCT
                      ____________________________________________________________
consensus             GCTGGTTCCTCATTAATGGGGATAGGAACTGCAACAGGGAAGACCAGAGCCAGAGATGCT
 
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rJMFF005K04+          GCTTTAAATGCCATTCAGTCTCCATTATTAGATATTGGTATTGAGAGGGCTACT-GGAAT
rJMFF007P16+          GCTTTAAATGCCATTCAGTCTCCATTATTAGATATTGGTATTGAGAGGGCTACT-GGAAT
rJMSF049G22+          GC-TTAAATGCCATTCAGTCTCCATTATTAGATATTGGTATTGAGAGGGCTACTGGGAAT
                      ____________________________________________________________
consensus             GCTTTAAATGCCATTCAGTCTCCATTATTAGATATTGGTATTGAGAGGGCTACT-GGAAT
 
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rJMFF005K04+          TGTGTGGAATATAACTGGTGGGACTGACTTGACATTGTTTGAGGTAAACGCTGCAGCAGA
rJMFF007P16+          TGTGTGGAATATAACTGGTGGGACTGACTTGACATTGTTTGAGGTAAACGCTGCAGCAGA
rJMSF049G22+          TGTGTGGAATATAACTGGTGGGACTGACTTGACATTGTTTGAGGTAAACGCTGCAGCAGA
                      ____________________________________________________________
consensus             TGTGTGGAATATAACTGGTGGGACTGACTTGACATTGTTTGAGGTAAACGCTGCAGCAGA
 
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rJMFF033L22+                                                     GGAGCTGTTATCGATCC
rJMFF005K04+          GGTCATATATGACCTTGTTGATCCAAGTGCGAACTTAATTTTTGGAGCTGTTATCGATCC
rJMFF007P16+          GGTCATATATGACCTTGTTGATCCAAGTGCGAACTTAATTTTTGGAGCTGTTATCGATCC
rJMSF049G22+          GGTCATATATGACCTTGTTGATCCAAGTGCGAACTTAATTTTTGGAGCTGTTATCGATCC
                      ____________________________________________________________
consensus             GGTCATATATGACCTTGTTGATCCAAGTGCGAACTTAATTTTTGGAGCTGTTATCGATCC
 
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rJMFF033L22+          CTCAATAAGTGGTCAGGTTAGTATTACTTTAATTGCCACTGGATTCAACCGGCAAGAAGG
rJMFF005K04+          CTCAATAAGTGGTCAGGTTAGTATTACTTTAATTGCCACTGGATTCAAACGGCAAGAAGG
rJMFF007P16+          CTCAATAAGTGGTCAGGTTAGTATTACTTTAATTGCCACTGGATTCAAACGGCAAGAAGG
rJMSF049G22+          CTCAATAAGTGGTCAGGTTAGTATTACTTTAATTGCCACTGGATTCAAACGGCAAGAAGG
                      ____________________________________________________________
consensus             CTCAATAAGTGGTCAGGTTAGTATTACTTTAATTGCCACTGGATTCAAACGGCAAGAAGG
 
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rJMFF033L22+          TGATGNCAAGCCCCTCCAGGCAAATCAGNTAGCNCCGGGAGATGCTTCCATNGGAATCAA
rJMFF005K04+          TGATGACAAGCCCCTCCAGGCAAATCAGCTAGCACCGGGAGATGCTTCCATCGGAATCAA
rJMFF007P16+          TGATGACAAGCCCCTCCAGGCAAATCAGCTAGCACCGGGAGATGCTTCCATCGGAATCAA
rJMSF049G22+          TGATGACAAGCCCCTCCAGGCAAATCAGCTAGCACCGGGAGATGCTTCCATCGGAATCAA
                      ____________________________________________________________
consensus             TGATGACAAGCCCCTCCAGGCAAATCAGCTAGCACCGGGAGATGCTTCCATCGGAATCAA
 
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rJMFF033L22+          TCGNCGGCCAGCATCATTCATGGATGGCAGTTCAGTCGAGATCCCTGAGTTTTTGAAGAA
rJMFF005K04+          TCGACGGCCAGCATCATTCATGGATGGCAGTTCAGTCGAGATCCCTGAGTTTTTGAAGAA
rJMFF007P16+          TCGACGGCCAGCATCATTCATGGATGGCAGTTCAGTCGAGATCCCTGAGTTTTTGAAGAA
rJMSF049G22+          TCGACGGCCAGCATCATTCATGGATGGCAGTTCAGTCGAGATCCCTGAGTTTTTGAAGAA
                      ____________________________________________________________
consensus             TCGACGGCCAGCATCATTCATGGATGGCAGTTCAGTCGAGATCCCTGAGTTTTTGAAGAA
 
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rJMFF033L22+          GAAAGGACGATCACGCTATCCAAGAGCTTAGGATTTCAATAATGCATCAAAGGGCGAATT
rJMFF005K04+          GAAAGGACGATCACGCTATCCAAGAGCTTAGGATTTCAATAATGCATCAAAGGGCGAATT
rJMFF007P16+          GAAAGGACGATCACGCTATCCAAGAGCTTAGGATTTCAATAATGCATCAAAGGGCGAATT
rJMSF049G22+          GAAAGGACGATCACGCTATCCAAGAGCTTAGGATTTCAATAATGCATCAAAGGGCGAATT
                      ____________________________________________________________
consensus             GAAAGGACGATCACGCTATCCAAGAGCTTAGGATTTCAATAATGCATCAAAGGGCGAATT
 
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rJMFF033L22+          CACCTCCAAGAAAGCATTAGTCCATCACGCATTTCTCAATAAAGTGCTATACGTATGTGA
rJMFF005K04+          CACCTCCAAGAAAGCATTAGTCCATCACGCATTTCTCAATAAAGTGCTATACGTATGTGA
rJMFF007P16+          CACCTCCAAGAAAGCATTAGTCCATCACGCATTTCTCAATAAAGTGCTATACGTATGTGA
rJMSF049G22+          CACCTCCAAGAAAGCATTAGTCCATCACGCATTTCTCAATAAAGTGCTATACGTATGTGA
                      ____________________________________________________________
consensus             CACCTCCAAGAAAGCATTAGTCCATCACGCATTTCTCAATAAAGTGCTATACGTATGTGA
 
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rJMFF033L22+          TCTTTTAGTTGGTGAATATTTAGCGCTTCCGAGCCAATCTAGTAGAATAAGTTGTCAATC
rJMFF005K04+          TCTTTTAGTTGGTGAATATTTAGCGCTTCCGAGCCAATCTAGTAGAATAAGTTGTCAATC
rJMFF007P16+          TCTTTTAGTTGGTGAATATTTAGCGCTTCCGAGCCAATCTAGTAGAATAAGTTGTCAATC
rJMSF049G22+          TCTTTTAGTTGGTGAATATTTAGCGCTTCCGAGCCAATCTAGTAGAATAAGTTGTCAATC
                      ____________________________________________________________
consensus             TCTTTTAGTTGGTGAATATTTAGCGCTTCCGAGCCAATCTAGTAGAATAAGTTGTCAATC
 
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rJMFF033L22+          TTTG                                                        
rJMFF005K04+          TTTGCGATTAGTTGAGAAAGGTTTATAGAAGACAATTAGATGAGCTTTGTGGTGGTGTGT
rJMFF007P16+          TTTGCGATTAGTTGAGAAAGGTTTATAGAAGACAATTAGATGAGCTTTGTGGTGGTGTGT
rJMSF049G22+          TTTGCGATTAGTTGAGAAAGGTTTATAGAAGACAATTAGATGAGCTTTGTGGTGGTGTGT
                      ____________________________________________________________
consensus             TTTGCGATTAGTTGAGAAAGGTTTATAGAAGACAATTAGATGAGCTTTGTGGTGGTGTGT
 
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rJMFF005K04+          ACAGTGTATTATATTTGA                                          
rJMFF007P16+          ACAGTGTATTATATTTGATGCTTAGT                                  
rJMSF049G22+          ACAGTGTATTATATTTGATGCTTAGTTGAAGGCTTCCATGATTATGGTTTATGAAATAGG
                      ____________________________________________________________
consensus             ACAGTGTATTATATTTGATGCTTAGTTGAAGGCTTCCATGATTATGGTTTATGAAATAGG
 
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rJMSF049G22+          GCAGTTTTGGTTATTCCAGTTCTTGTACTAATATCTGTTTTCTTCTTTTCTGCTACATAT
                      ____________________________________________________________
consensus             GCAGTTTTGGTTATTCCAGTTCTTGTACTAATATCTGTTTTCTTCTTTTCTGCTACATAT
 
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rJMSF049G22+          AGTCTGTGTAAACATCAGTTTCTCCTCTAACATTCACATGAGACAATATTGGTAAAATGA
                      ____________________________________________________________
consensus             AGTCTGTGTAAACATCAGTTTCTCCTCTAACATTCACATGAGACAATATTGGTAAAATGA