Contig 014105:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF046K01Sequence706002459 (2)ref|XP_009781134.1|8e-73PREDICTED: UPF0420 protein C16orf58 homolog isoform X1 [Nicotiana sylvestris]818014105 (2)ref|XP_006366002.1|3e-31PREDICTED: UPF0420 protein C16orf58 homolog [Solanum tuberosum]
JMSF049E20Sequence665002459 (2)ref|XP_009781134.1|4e-52PREDICTED: UPF0420 protein C16orf58 homolog isoform X1 [Nicotiana sylvestris]753014105 (2)ref|XP_006366002.1|1e-28PREDICTED: UPF0420 protein C16orf58 homolog [Solanum tuberosum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF049E20+ AAAT
rJMSF046K01+ AGAGGAANGTATATGCATTGCTCAAGAATCAAGCNAAAT
                      ____________________________________________________________
consensus AGAGGAANGTATATGCATTGCTCAAGAATCAAGCNAAAT
 
. : . : . : . : . : . :
rJMSF049E20+ CTGATGATGTACTCAAAGCGGCTTTCCATGCACATATTCTTCTGCACTTCATCAAGTCGT
rJMSF046K01+ NTGATGATGTACTCAAAGCGGCTTTCCATGCACATATTCTTNTGCACTTCATCAAGTCGT
                      ____________________________________________________________
consensus CTGATGATGTACTCAAAGCGGCTTTCCATGCACATATTCTTCTGCACTTCATCAAGTCGT
 
. : . : . : . : . : . :
rJMSF049E20+ CCAATTATCAGTCTTCGTCCGGGAAAGAAATGCAGGGTGATCTCTCTTTTTCCTTGGCAT
rJMSF046K01+ CCAATTATCAGTCTTCGTCCGGGAAAGAAATGCAGGGTGATCTCTCTTTTTCCTTGGCAT
                      ____________________________________________________________
consensus CCAATTATCAGTCTTCGTCCGGGAAAGAAATGCAGGGTGATCTCTCTTTTTCCTTGGCAT
 
. : . : . : . : . : . :
rJMSF049E20+ CCAGTGCTGATCTTCATGCTCATGTTGCAGAATCTTATAAAATGGTCTCAGCTCTGTATG
rJMSF046K01+ CCAGTGCTGATCTTCATGCTCATGTTGCAGAATCTTATAAAATGGTCTCAGCTCTGTATG
                      ____________________________________________________________
consensus CCAGTGCTGATCTTCATGCTCATGTTGCAGAATCTTATAAAATGGTCTCAGCTCTGTATG
 
. : . : . : . : . : . :
rJMSF049E20+ CACCTTTCAAGAGTAAGGCCAAAGAACAGGGGTGGGTAATGTCAGAATCACTGCTTAATC
rJMSF046K01+ CACCTTTCAAGAGTAAGGCCAAAGAACAGGGGTGGGTAATGTCAGAATCACTGCTTAATC
                      ____________________________________________________________
consensus CACCTTTCAAGAGTAAGGCCAAAGAACAGGGGTGGGTAATGTCAGAATCACTGCTTAATC
 
. : . : . : . : . : . :
rJMSF049E20+ CTGGTCGAGCTCGCCTATGTGACTTGGGTGAATAAGAAGATGTTTTCTGCCGTTAATATA
rJMSF046K01+ CTGGTCGAGCTCGCCTATGTGACTTGGGTGAATAAGAAGATGTTTTCTGCCGTTAATATA
                      ____________________________________________________________
consensus CTGGTCGAGCTCGCCTATGTGACTTGGGTGAATAAGAAGATGTTTTCTGCCGTTAATATA
 
. : . : . : . : . : . :
rJMSF049E20+ CTTGTGTGAACATCTGATGTTGGATATAAAAATTTGATAAGCCTGCTTAGACAAGTAACA
rJMSF046K01+ CTTGTGTGAACATCTGATGTTGGATATAAAAATTTGATAAGCCTGCTTAGACAAGTAACA
                      ____________________________________________________________
consensus CTTGTGTGAACATCTGATGTTGGATATAAAAATTTGATAAGCCTGCTTAGACAAGTAACA
 
. : . : . : . : . : . :
rJMSF049E20+ CTCATTTGCACAGTAACAAGATTGTCATGCCTTCTCCCCCCACAAAAATAAAAAACAAGA
rJMSF046K01+ CTCATTTGCACAGTAACAAGATTGTCATGCCTTCTCCCCCCCCAAAAATAAAAAACAAGA
                      ____________________________________________________________
consensus CTCATTTGCACAGTAACAAGATTGTCATGCCTTCTCCCCCCCCAAAAATAAAAAACAAGA
 
. : . : . : . : . : . :
rJMSF049E20+ TCATCCATCGTGCCTTGAGTGTGTATCACGCAGAGCTTCCTGTCATGGCTTGCACAAACT
rJMSF046K01+ TCATCCATCGTGCCTTGAGTGTGTATCACGCAGAGCTTCCTGTCATGGCTTGCACAAACT
                      ____________________________________________________________
consensus TCATCCATCGTGCCTTGAGTGTGTATCACGCAGAGCTTCCTGTCATGGCTTGCACAAACT
 
. : . : . : . : . : . :
rJMSF049E20+ ACAGAATGCGTAAGAGCTGTAAACAGAGATGCAAGAAGATTCTACCTGTGTATGAAAATA
rJMSF046K01+ ACAGAATGCGTAAGAGCTGTAAACAGAGATGCAAGAAGATTCTACCTGTGTATGAAAATA
                      ____________________________________________________________
consensus ACAGAATGCGTAAGAGCTGTAAACAGAGATGCAAGAAGATTCTACCTGTGTATGAAAATA
 
. : . : . : . : . : . :
rJMSF049E20+ GTAGCTTGCATTTCCGCAATGTAAGCAAGAAATAACCTCTCCTATCAGAGTTGTCAGCGT
rJMSF046K01+ GTAGCTTGCATTTCCGCAATGTAAGCAAGAAATAACCTCTCCTATCAGAGTTGTCAGCGT
                      ____________________________________________________________
consensus GTAGCTTGCATTTCCGCAATGTAAGCAAGAAATAACCTCTCCTATCAGAGTTGTCAGCGT
 
. : . : . : . : . : . :
rJMSF049E20+ TCGTGTAAATTTTGTTAAATTTTTTTCATGTTTGTTTTTCTATTAGGTGCTTTTGGCTGT
rJMSF046K01+ TCGTGTAAATTTTGTTAAATTTTTTTCATGTTTGTTTTTCTATTAGGTGCTTTTGGCTGT
                      ____________________________________________________________
consensus TCGTGTAAATTTTGTTAAATTTTTTTCATGTTTGTTTTTCTATTAGGTGCTTTTGGCTGT
 
. : . : . : . : . : . :
rJMSF049E20+ TGTTAACAGTATGAGGTGCATAATGTTTAGAGCATAACCATGTATGCTTTTATTATGATT
rJMSF046K01+ TGTTAACAGTATGAGGTGCATAATGTTTAGAGCATAA-CATGTATGCTTTTATTATGATT
                      ____________________________________________________________
consensus TGTTAACAGTATGAGGTGCATAATGTTTAGAGCATAACCATGTATGCTTTTATTATGATT
 
. : . : . : . : . : . :
rJMSF049E20+ TGCGAGTGTGTTATGTAAACCCCTA
rJMSF046K01+ TGCGAGTGTGTTATGTAAACCCCTATTAGCATAGTGTATATAGCATGATTTATATGCTTT
                      ____________________________________________________________
consensus TGCGAGTGTGTTATGTAAACCCCTATTAGCATAGTGTATATAGCATGATTTATATGCTTT