Contig 014078:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF033K13+                         CTTAATCAAAGGGTTTGCTCCTTATATTTGTATGAAATAAATATG
                      ____________________________________________________________
consensus                            CTTAATCAAAGGGTTTGCTCCTTATATTTGTATGAAATAAATATG
 
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rJMSF033K13+          ATCTTTAATAAGCTTTCCAGGATTTGGTGGTCGACTATATGGGTGTGCCAAAATATGCTG
                      ____________________________________________________________
consensus             ATCTTTAATAAGCTTTCCAGGATTTGGTGGTCGACTATATGGGTGTGCCAAAATATGCTG
 
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rJMSF033K13+          GAATTAGCATGACACAACACCCACAGTACGTTACTGTCAGAAATGAGCGTGGAAAAGTAA
rJMSF042D22+                             CCCACAGTACGTTACTGTCAGAAATGAGCGTGGAAAAGAAA
                      ____________________________________________________________
consensus             GAATTAGCATGACACAACACCCACAGTACGTTACTGTCAGAAATGAGCGTGGAAAAGTAA
 
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rJMSF033K13+          TGCTTAGCCTTGTGGAGCATCTTTTGGAAGTGACTCCTACGATTAGCAGTGGTGACAGGA
rJMSF042D22+          TGTTTAGCCTTGTGGAGCATCTTTTGGAAGTGACTCCTACGATTAGCAGTGGTGACAGGA
                      ____________________________________________________________
consensus             TGTTTAGCCTTGTGGAGCATCTTTTGGAAGTGACTCCTACGATTAGCAGTGGTGACAGGA
 
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rJMSF033K13+          GGCCATTTGTAACGGAAACAGTGAAGGCAGATGACAATGCCAAGTTGGGAAGAGGTCCTG
rJMSF042D22+          GGCCATTTGTAACGGAAACAGTGAAGGCAGATGACAATGCCAAGTTGGGAAGAGGTCCTG
                      ____________________________________________________________
consensus             GGCCATTTGTAACGGAAACAGTGAAGGCAGATGACAATGCCAAGTTGGGAAGAGGTCCTG
 
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rJMSF033K13+          CTAAGCCTGCCCCAATGTTCGTTGGCAACTTGATAGCATTCATCTTAAACCTCGTTGGCC
rJMSF042D22+          CTAAGCCTGCCCCAATGTTCGTTGGCAACTTGATAGCATTCATCTTAAACCTCGTTGGCC
                      ____________________________________________________________
consensus             CTAAGCCTGCCCCAATGTTCGTTGGCAACTTGATAGCATTCATCTTAAACCTCGTTGGCC
 
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rJMSF033K13+          CAAAGGGTCTAGAATTTGCCCGGTATTCGTTGGATTACCACAGCATAAGAAACTATCTGT
rJMSF042D22+          CAAAGGGTCTAGAATTTGCCCGGTATTCGTTGGATTACCACAGCATAAGAAACTATCTGT
                      ____________________________________________________________
consensus             CAAAGGGTCTAGAATTTGCCCGGTATTCGTTGGATTACCACAGCATAAGAAACTATCTGT
 
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rJMSF033K13+          ATGTCATCCGTGCTTGGGGAAGAGAAAGAGCTGAACTGCACATGCCATCGTATGCAAAGC
rJMSF042D22+          ATGTCATCCGTGCTTGGGGAAGAGAAAGAGCTGAACTGCACATGCCATCGTATGCAAAGC
                      ____________________________________________________________
consensus             ATGTCATCCGTGCTTGGGGAAGAGAAAGAGCTGAACTGCACATGCCATCGTATGCAAAGC
 
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rJMSF033K13+          GAATCGTTTCCATGTATAACCAGAATGGTGAAATCGATCGAATGCTTGAGCAGTGATTGA
rJMSF042D22+          GAATCGTTTCCATGTATAACCAGAATGGTGAAATCGATCGAATGCTTGAGCAGTGATTGA
                      ____________________________________________________________
consensus             GAATCGTTTCCATGTATAACCAGAATGGTGAAATCGATCGAATGCTTGAGCAGTGATTGA
 
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rJMSF033K13+          GGACATAATTTTGATAAAGAACAATGCCAGGCCACAGCAGTTTGTACCAAAAACCATCAA
rJMSF042D22+          GGACATAATTTTGATAAAGAACAATGCCAGGCCACAGCAGTTTGTACCAAAAACCATCAA
                      ____________________________________________________________
consensus             GGACATAATTTTGATAAAGAACAATGCCAGGCCACAGCAGTTTGTACCAAAAACCATCAA
 
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rJMSF033K13+          ATATGACCTTTTGGCCTTTGCTGTAATGCAGACTTCTGGGCATGCTCAGTCTGAGGATAT
rJMSF042D22+          ATATGACCTTTTGGCCTTTGCTGTAATGCAGACTTCTGGGCATGCTCAGTCTGAGGATAT
                      ____________________________________________________________
consensus             ATATGACCTTTTGGCCTTTGCTGTAATGCAGACTTCTGGGCATGCTCAGTCTGAGGATAT
 
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rJMSF033K13+          TGTTGTTATGCAAACAATTGCATATC                                  
rJMSF042D22+          TGTTGTTATGCAAACAATTGCATATCATAATGTAAATTTATGCATGTCACAGTATTTCCA
                      ____________________________________________________________
consensus             TGTTGTTATGCAAACAATTGCATATCATAATGTAAATTTATGCATGTCACAGTATTTCCA
 
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rJMSF042D22+          GGAAGACCCTCCATGCCAATGATTTAAACTTTAGGGCATGTTAGCTCCCACCACACAGAA
                      ____________________________________________________________
consensus             GGAAGACCCTCCATGCCAATGATTTAAACTTTAGGGCATGTTAGCTCCCACCACACAGAA
 
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rJMSF042D22+          CCTTAGCTTGCATGGTTTTGATTGATCCAAACCACGCGGGTGCGGTCTGGATCGAATCCA
                      ____________________________________________________________
consensus             CCTTAGCTTGCATGGTTTTGATTGATCCAAACCACGCGGGTGCGGTCTGGATCGAATCCA
 
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rJMSF042D22+          AATTAGGCTTACAATACTGTGAATATTGGCCTATTGGGTGCCATAGGCATGCATGAAGAC
                      ____________________________________________________________
consensus             AATTAGGCTTACAATACTGTGAATATTGGCCTATTGGGTGCCATAGGCATGCATGAAGAC