Contig 014077:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF030K21+                                               TCCACATCCATTTGTATTTNTCC
rJMSF041P18+                                               TCCACATCCATTTGTATTTCTCC
                      ____________________________________________________________
consensus                                                  TCCACATCCATTTGTATTTCTCC
 
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rJMSF030K21+          ATAACAGCATTCCTTNGTCACTACCTGCCCTAAGGATATCGAACAGTGCCCCTGTAACCC
rJMSF041P18+          ATAACAGCATTCCTTCGTCACTACCTGCCCTAAGGATATCGAACAGTGCCCCTGTAACCC
                      ____________________________________________________________
consensus             ATAACAGCATTCCTTCGTCACTACCTGCCCTAAGGATATCGAACAGTGCCCCTGTAACCC
 
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rJMSF030K21+          CACCGCTTTNTTCCCCAACCAGGGTTCTCAAGCAGACTTTCAATCTGGAAACTTTGGCCA
rJMSF041P18+          CACCGCTTTCTTCCCCAACCAGGGTTCTCAAGCAGACTTTCAATCTGGAAACTTTGGCCA
                      ____________________________________________________________
consensus             CACCGCTTTCTTCCCCAACCAGGGTTCTCAAGCAGACTTTCAATCTGGAAACTTTGGCCA
 
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rJMSF030K21+          AAGATTCAATGTCAGCCTTCAACATCTCTTTCTTTGCTTCTGCCCCCACCAGCCCAACTC
rJMSF041P18+          AAGATTCAATGTCAGCCTTCAACATCTCTTTCTTTGCTTCTGCCCCCACCAGCCCAACTC
                      ____________________________________________________________
consensus             AAGATTCAATGTCAGCCTTCAACATCTCTTTCTTTGCTTCTGCCCCCACCAGCCCAACTC
 
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rJMSF030K21+          GTGGGCATCGGTTCCCTGCCACTATTCCTGAATGCGATGAATCCGACACATCCACCATTG
rJMSF041P18+          GTGGGCATCGGTTCCCTGCCACTATTCCTGAATGCGATGAATCCGACACATCCACCATTG
                      ____________________________________________________________
consensus             GTGGGCATCGGTTCCCTGCCACTATTCCTGAATGCGATGAATCCGACACATCCACCATTG
 
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rJMSF030K21+          ATTCGGGCCAGTGGATGAGCTTTCAGAAGTATGCACCTAGCGTGGTTCCAACTTCCCCGA
rJMSF041P18+          ATTCGGGCCAGTGGATGAGCTTTCAGAAGTATGCACCTAGCGTGGTTCCAACTTCCCCGA
                      ____________________________________________________________
consensus             ATTCGGGCCAGTGGATGAGCTTTCAGAAGTATGCACCTAGCGTGGTTCCAACTTCCCCGA
 
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rJMSF030K21+          CATTTAACCTCATGAAACCTGTTGCTCAACAAATTCCGTCTAGTGATGCAATGTTCACCG
rJMSF041P18+          CATTTAACCTCATGAAACCTGTTGCTCAACAAATTCCGCCTAGTGATGCAATGTTCACCG
                      ____________________________________________________________
consensus             CATTTAACCTCATGAAACCTGTTGCTCAACAAATTCCGTCTAGTGATGCAATGTTCACCG
 
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rJMSF030K21+          AGGAAGGTAAAAGCATGGAGTTTGACTTCGAGAAGGTTGCAATGAAGGCATGGGAAGGTG
rJMSF041P18+          AGGAAGGTAAAAGCATGGAGTTTGACTTCGAGAAGGTTGCAATGAAGGCATGGGAAGGTG
                      ____________________________________________________________
consensus             AGGAAGGTAAAAGCATGGAGTTTGACTTCGAGAAGGTTGCAATGAAGGCATGGGAAGGTG
 
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rJMSF030K21+          AAAGAATTCACGAGGTAGGATTGGATGATCTGGAGCTCACGCTTGGGAGCGGGAGTGCTC
rJMSF041P18+          AAAGAATTCNCGAGGTAGGATTGGATGATCTGGAGCTCACGCTTGGGAGCGGGAGTGCTC
                      ____________________________________________________________
consensus             AAAGAATTCACGAGGTAGGATTGGATGATCTGGAGCTCACGCTTGGGAGCGGGAGTGCTC
 
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rJMSF030K21+          GCTCATGAGTAGTTCATCGAATCGGCCCTTGCTTGTCTCCTCTTAATTCTTTATGAAGTT
rJMSF041P18+          GCTCATGAGTAGTTCATCGAATCGGCCCTTGCTTGTCTCCTCTTAATTCTTTATGAAGTT
                      ____________________________________________________________
consensus             GCTCATGAGTAGTTCATCGAATCGGCCCTTGCTTGTCTCCTCTTAATTCTTTATGAAGTT
 
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rJMSF030K21+          CTTTTCTTTTTCCTTCTTTTTTTTTTCATTTCCTTGTAGTAATTAAAAACTCCCTTTAAA
rJMSF041P18+          CTTTTCTTTTTCCTTCTTTTTTTTTTCATTTCCTTGTAGTAATTAAAAACTCCCTTTAAA
                      ____________________________________________________________
consensus             CTTTTCTTTTTCCTTCTTTTTTTTTTCATTTCCTTGTAGTAATTAAAAACTCCCTTTAAA
 
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rJMSF030K21+          ATTCTTTGCCTTTTTCCTTCTTACAAGAATTACATGTAGATAGATATAT           
rJMSF041P18+          ATTCTTTGCCTTTTTCCTTCTTACAAGAATTACATGTAGATAGATATATTATATTATTAT
                      ____________________________________________________________
consensus             ATTCTTTGCCTTTTTCCTTCTTACAAGAATTACATGTAGATAGATATATTATATTATTAT
 
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rJMSF041P18+          TTGGAGTAATATTGCTCCCTTCTCTTCATTGTAGTGGAGATATTTCTGCAAATTGACCAG
                      ____________________________________________________________
consensus             TTGGAGTAATATTGCTCCCTTCTCTTCATTGTAGTGGAGATATTTCTGCAAATTGACCAG