Contig 014037:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF043P20+                   AATGTCAAGGTGTGTGATTTTGGGTTTGTCACGCTTAAAAACACAAACACT
                      ____________________________________________________________
consensus                      AATGTCAAGGTGTGTGATTTTGGGTTTGTCACGCTTAAAAACACAAACACT
 
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rJMSF043P20+          TTCTTGTCATCCAAATCAACAGCTGGAACGCCTGAGTGGATGGCTCCTGAAGTTCTACGT
rJMSF035M11+                TCATCCAAATCAACAGCTGGAACGCCTGAGTGGATGGCTCCTGAAGTTCTACGT
                      ____________________________________________________________
consensus             TTCTTGTCATCCAAATCAACAGCTGGAACGCCTGAGTGGATGGCTCCTGAAGTTCTACGT
 
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rJMSF043P20+          AATGAACCTTCAAATGAAAAGTGTGATGTTTATAGCTTTGGTGTTATTCTGTGGGAACTT
rJMSF035M11+          AATGAACCTTCAAATGAAAAGTGTGATGTTTATAGCTTTGGTGTTATTCTGTGGGAACTT
                      ____________________________________________________________
consensus             AATGAACCTTCAAATGAAAAGTGTGATGTTTATAGCTTTGGTGTTATTCTGTGGGAACTT
 
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rJMSF043P20+          GCAACACTGAGATTACCTTGGAGTGGGATGAACCCTATGCAAGTTGTAGGGGCTGTTGGT
rJMSF035M11+          GCAACACTGAGATTACCTTGGAGTGGGATGAACCCTATGCAAGTTGTAGGGGCTGTTGGT
                      ____________________________________________________________
consensus             GCAACACTGAGATTACCTTGGAGTGGGATGAACCCTATGCAAGTTGTAGGGGCTGTTGGT
 
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rJMSF043P20+          TTCCAGAATCGGCGTCTTGAAATCCCAAAAGAAGTCGATCCACTTGTGGCAAGGATAATA
rJMSF035M11+          TTCCAGAATCGGCGTCTTGAAATCCCAAAAGAAGTCGATCCACTTGTGGCAAGGATAATA
                      ____________________________________________________________
consensus             TTCCAGAATCGGCGTCTTGAAATCCCAAAAGAAGTCGATCCACTTGTGGCAAGGATAATA
 
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rJMSF043P20+          TGGGAATGTTGGCAGATGGAACCAAATTTGCGGCCATCATTTGCACAGTTAACAGTGGCA
rJMSF035M11+          TGGGAATGTTGGCAGATGGAACCAAATTTGCGGCCATCATTTGCACAGTTAACAGTGGCA
                      ____________________________________________________________
consensus             TGGGAATGTTGGCAGATGGAACCAAATTTGCGGCCATCATTTGCACAGTTAACAGTGGCA
 
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rJMSF043P20+          TTAAGGCCATTGCAGCGGCTTGTGATTCCTTCACATGTGGACCAGCCAAGTTCAGCTTTG
rJMSF035M11+          TTAAGGCCATTGCAGCGGCTTGTGATTCCTTCACATGTGGACCAGCCAAGTTCAGCTTTG
                      ____________________________________________________________
consensus             TTAAGGCCATTGCAGCGGCTTGTGATTCCTTCACATGTGGACCAGCCAAGTTCAGCTTTG
 
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rJMSF035B16+                                                        ATGTCAATAAAAAG
rJMSF043P20+          CCACAAGAAATATCTGTAAATTCTACACCCTGATGATTGTCTTCTTATGTCAATAAAAAG
rJMSF035M11+          CCACAAGAAATATCTGTAAATTCTACACCCTGATGATTGTCTTCTTATGTCAATAAAAAG
                      ____________________________________________________________
consensus             CCACAAGAAATATCTGTAAATTCTACACCCTGATGATTGTCTTCTTATGTCAATAAAAAG
 
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rJMSF035B16+          GCGGCCGGCATCATNTGTTCTNTATAGAAAGAGGGATCATTTTCATCTCCCTANGCAAAG
rJMSF043P20+          GCGGCCGGCATCATTTGTTCTTTATAGAAAGAGGGATCATTTTCATCTCCCTATGCAAAG
rJMSF035M11+          GCGGCCGGCATCATTTGTTCTTTATAGAAAGAGGGATCATTTTCATCTCCCTATGCAAAG
                      ____________________________________________________________
consensus             GCGGCCGGCATCATTTGTTCTTTATAGAAAGAGGGATCATTTTCATCTCCCTATGCAAAG
 
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rJMSF035B16+          CTGAGAAACGAGAAGTAGNTCATTCGTNGAGGAANGATGGGAGGGTGTATGCTCCATCAA
rJMSF043P20+          CTGAGAAACGAGAAGTAGGTCATTCGTGGAGGAAGGATGGGAGGGTGTA-GCTCAATCAA
rJMSF035M11+          CTGAGAAACGAGAAGTAGGTCATTCGTGGAGGAAGGATGGGAGGGTGTA-GCTCAATCAA
                      ____________________________________________________________
consensus             CTGAGAAACGAGAAGTAGGTCATTCGTGGAGGAAGGATGGGAGGGTGTA-GCTCAATCAA
 
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rJMSF035B16+          TCNAATATAAGTGTAGAAAGGTGCATNTTAGTTGTGTTTCTTGTATAGTGGGATGCTGCT
rJMSF043P20+          TCAAATATAAGTGTAGAAAGGTGCATATTAGTTGTGTTTCTTGTATAGTGGGATGCTGCT
rJMSF035M11+          TCAAATATAAGTGTAGAAAGGTGCATATTAGTTGTGTTTCTTGTATAGTGGGATGCTGCT
                      ____________________________________________________________
consensus             TCAAATATAAGTGTAGAAAGGTGCATATTAGTTGTGTTTCTTGTATAGTGGGATGCTGCT
 
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rJMSF035B16+          GCTGCATATAAGTTTGGGTACGTGTGATTTTTAAACC                       
rJMSF043P20+          GCTGCATATAAGTTTGGGTACGTGTGATTTTTAAACCTGTAAAACTTTA           
rJMSF035M11+          GCTGCATATAAGTTTGGGTACGTGTGATTTTTAAACCTGTAAAACTTTACTGTGTTGGCT
                      ____________________________________________________________
consensus             GCTGCATATAAGTTTGGGTACGTGTGATTTTTAAACCTGTAAAACTTTACTGTGTTGGCT
 
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rJMSF035M11+          AAATCTTGCGGCTAAGGAAGTTTTGGTATTCCGCCCAAACCCAGGCAAGGCAGTATGTCT
                      ____________________________________________________________
consensus             AAATCTTGCGGCTAAGGAAGTTTTGGTATTCCGCCCAAACCCAGGCAAGGCAGTATGTCT