clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFS128B10 | Sequence | 566 | 014035 (3) | ref|XP_009597928.1| | 129 | PREDICTED: uncharacterized protein LOC104093820 [Nicotiana tomentosiformis] | |||||
JMSF022B02 | Sequence | 642 | 007970 (5) | ref|XP_009793596.1| | 94.0 | PREDICTED: uncharacterized protein LOC104240451 [Nicotiana sylvestris] | 773 | 014035 (3) | ref|XP_009597928.1| | 219 | PREDICTED: uncharacterized protein LOC104093820 [Nicotiana tomentosiformis] |
JMSF035E10 | Sequence | 680 | 007970 (5) | ref|XP_011094094.1| | 3e-08 | PREDICTED: TBC1 domain family member 5 homolog A-like [Sesamum indicum] | 716 | 014035 (3) | ref|XP_009793596.1| | 215 | PREDICTED: uncharacterized protein LOC104240451 [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
JMFS128B10- GAAAAG
____________________________________________________________
consensus GAAAAG
. : . : . : . : . : . :
JMFS128B10- TACCAAATTTCTTCTAACAGCTGAATTGGGTACTTTTCTTCCACCATTGACCGTAGATGG
____________________________________________________________
consensus TACCAAATTTCTTCTAACAGCTGAATTGGGTACTTTTCTTCCACCATTGACCGTAGATGG
. : . : . : . : . : . :
JMFS128B10- AGATGGTGCAGACTCGGTTCTTGACAAGCGCAACTTAGCTGTTAGAAGAAATTTGTTGAA
____________________________________________________________
consensus AGATGGTGCAGACTCGGTTCTTGACAAGCGCAACTTAGCTGTTAGAAGAAATTTGTTGAA
. : . : . : . : . : . :
JMFS128B10- AGATCTGGCTCGGCAGCTTGGGTCAGATGAAGAGACAGATGACTTGGTTGATAATGAAAA
____________________________________________________________
consensus AGATCTGGCTCGGCAGCTTGGGTCAGATGAAGAGACAGATGACTTGGTTGATAATGAAAA
. : . : . : . : . : . :
JMFS128B10- TGTAGGCCAGAGGGATCTGGTTGATACTGATGGACAAGATGGAGAAAACAAAAATTTTAG
rJMSF022B02+ CCAGAGGGATCTGGTTGATACTGATGGNCAAGATGGAGAAACCAAAAATTTTAG
____________________________________________________________
consensus TGTAGGCCAGAGGGATCTGGTTGATACTGATGGACAAGATGGAGAAACCAAAAATTTTAG
. : . : . : . : . : . :
JMFS128B10- TTCCACATCTGAGGAGAGATGTTTCAGCCGAAACACTTGTAGTGAACAGAATTCTTATAT
rJMSF022B02+ TTCCACATCTGAGGAGAGATGTTTCAGCCGAAACACTTGTAGTGAACAGAATTCTTATAT
____________________________________________________________
consensus TTCCACATCTGAGGAGAGATGTTTCAGCCGAAACACTTGTAGTGAACAGAATTCTTATAT
. : . : . : . : . : . :
JMFS128B10- TTCTTCTGACCCACCTAGCCCTATTAGTGGTAATAACCATCAGGAAATTGGATCTGACAG
rJMSF022B02+ TTCTTCTGACCCACCTAGCCCTATTAGTGGTAATAACCATCAGGAAATTGGATCTGACAG
rJMSF035E10+ TCTGACCCACCTAGCCCTATTAGTGGTAATAACCATCAGGAAATTGGATCTGACAG
____________________________________________________________
consensus TTCTTCTGACCCACCTAGCCCTATTAGTGGTAATAACCATCAGGAAATTGGATCTGACAG
. : . : . : . : . : . :
JMFS128B10- AAGCAGTGTTGCATCAAATTTGTCTGTTGGTGACAATGATGGTGATGCAAGTAACGCTGT
rJMSF022B02+ AAGCAGTGTTGCATCAAATTTGTCTGTTGGTGACAATGATGGTGATGCAAGTAACGCTGT
rJMSF035E10+ AAGCAGTGTTGCATCAAATTTGTCTGTTGGTGACAATGATGGTGATGCAAGTAACGCTGT
____________________________________________________________
consensus AAGCAGTGTTGCATCAAATTTGTCTGTTGGTGACAATGATGGTGATGCAAGTAACGCTGT
. : . : . : . : . : . :
JMFS128B10- GGTGTCTGGAACTAACCTAGAAGGATCTCCTCTTCCTCTAGAAGGTGTTTCTGTAAAGTC
rJMSF022B02+ GGTGTCTGGAACTAACCTAGAAGGATCTCCTCTTCCTCTAGAAGGTGTTTCTGTAAAGTC
rJMSF035E10+ GGTGTCTGGAACTAACCTAGAAGGATCTCCTCTTCCTCTAGAAGGTGTTTCTGTAAAGTC
____________________________________________________________
consensus GGTGTCTGGAACTAACCTAGAAGGATCTCCTCTTCCTCTAGAAGGTGTTTCTGTAAAGTC
. : . : . : . : . : . :
JMFS128B10- TGAACAAAATGATGATTCTGGAGGGAAATCCACAACTTGCTCAAAGGAGCGGAAGCTTCG
rJMSF022B02+ TGAACAAAATGATGATTCTGGAGGGAAATCCACAACTTGCTCAAAGGAGCGGAAGCTTCG
rJMSF035E10+ TGAACAAAATGATGATTCTGGAGGGAAATCCACAACTTGCTCAAAGGAGCGGAAGCTTCG
____________________________________________________________
consensus TGAACAAAATGATGATTCTGGAGGGAAATCCACAACTTGCTCAAAGGAGCGGAAGCTTCG
. : . : . : . : . : . :
JMFS128B10- GTCTGTCAAATTTAACTGGT
rJMSF022B02+ GTCTGTCAAATTTAACTGGTTTTGGAAGTTTGGACGGAATGCTGGTGAAGGGGCATCTGA
rJMSF035E10+ GTCTGTCAAATTTAACTGGTTTTGGAAGTTTGGACGGAATGCTGGTGAAGGGGCATCTGA
____________________________________________________________
consensus GTCTGTCAAATTTAACTGGTTTTGGAAGTTTGGACGGAATGCTGGTGAAGGGGCATCTGA
. : . : . : . : . : . :
rJMSF022B02+ AAAAGATAGTGGCCCTGAGGTCACGAAAGTCCCCTGTGGCGGGAACAGTCAGAACAATCA
rJMSF035E10+ AAAAGATAGTGGCCCTGAGGTCACGAAAGTCCCCTGTGGCGGGAACAGTCAGAACAATCA
____________________________________________________________
consensus AAAAGATAGTGGCCCTGAGGTCACGAAAGTCCCCTGTGGCGGGAACAGTCAGAACAATCA
. : . : . : . : . : . :
rJMSF022B02+ TATTGGATCTTCTACAATTGAAGGGTTTGATAGTTCTGGCACTAGCAGAGGAGAGAATGT
rJMSF035E10+ TATTGGATCTTCTACAATTGAAGGGTTTGATAGTTCTGGCACTAGCAGAGGAGAGAATGT
____________________________________________________________
consensus TATTGGATCTTCTACAATTGAAGGGTTTGATAGTTCTGGCACTAGCAGAGGAGAGAATGT
. : . : . : . : . : . :
rJMSF022B02+ AGACCAGAATTTGTTGGTTTCATTAAGAAATCTTGGGAATTCCATGCTCGAGAATATTCA
rJMSF035E10+ AGACCAGAATTTGTTGGTTTCATTAAGAAATCTTGGGAATTCCATGCTCGAGAATATTCA
____________________________________________________________
consensus AGACCAGAATTTGTTGGTTTCATTAAGAAATCTTGGGAATTCCATGCTCGAGAATATTCA
. : . : . : . : . : . :
rJMSF022B02+ GGTGATCGAATCTGTTTTCCAGCAAGATCAGTCTCCAACAGGGCCATTGGAGAACTTGTC
rJMSF035E10+ GGTGATCGAATCTGTTTTCCAGCAAGATCAGTCTCCAACAGGGCCATTGGAGAACTTGTC
____________________________________________________________
consensus GGTGATCGAATCTGTTTTCCAGCAAGATCAGTCTCCAACAGGGCCATTGGAGAACTTGTC
. : . : . : . : . : . :
rJMSF022B02+ CAAGAGTGTTCTTGTGGGTAAAGGACAAGCCATGTCAGCTTTAAAGGAGCTTCGAAAAAT
rJMSF035E10+ CAAGAGTGTTCTTGTGGGTAAAGGACAAGCCATGTCAGCTTTAAAGGAGCTTCGAAAAAT
____________________________________________________________
consensus CAAGAGTGTTCTTGTGGGTAAAGGACAAGCCATGTCAGCTTTAAAGGAGCTTCGAAAAAT
. : . : . : . : . : . :
rJMSF022B02+ CAGCAACCTTTTATCTGAGATGTGAGGAGCAATAGTAATTTAAACTTGTATATAATTT
rJMSF035E10+ CAGCAACCTTTTATCTGAGATGTGAGGAGCAATAGTAATTTAAACTTGTATATAATTTTG
____________________________________________________________
consensus CAGCAACCTTTTATCTGAGATGTGAGGAGCAATAGTAATTTAAACTTGTATATAATTTTG
. : . : . : . : . : . :
rJMSF035E10+ TAATTAATTATTCACGAGTGCTGAAATAATAGGCTTTGTTCTCAAATCTGGATGGGATAT
____________________________________________________________
consensus TAATTAATTATTCACGAGTGCTGAAATAATAGGCTTTGTTCTCAAATCTGGATGGGATAT