| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF004P24 | Sequence | 752 | 014014 (9) | ref|XP_009788687.1| | 2e-78 | PREDICTED: phosphatidylinositol/phosphatidylcholine transfer protein SFH9-like | |||||
| JMSF030N18 | Sequence | 657 | 014014 (9) | gb|KJB13922.1| | 5e-80 | hypothetical protein B456_002G101900 [Gossypium raimondii] | 689 | 014014 (9) | ref|XP_009788687.1| | 2e-57 | PREDICTED: phosphatidylinositol/phosphatidylcholine transfer protein SFH9-like |
| JMSF039B01 | Sequence | 661 | 014014 (9) | gb|KJB13923.1| | 1e-101 | hypothetical protein B456_002G101900 [Gossypium raimondii] | 905 | 014014 (9) | ref|XP_009788687.1| | 8e-136 | PREDICTED: phosphatidylinositol/phosphatidylcholine transfer protein SFH9-like |
| JMSF050O05 | Sequence | 683 | 014014 (9) | gb|KJB13923.1| | 2e-107 | hypothetical protein B456_002G101900 [Gossypium raimondii] | 721 | 014014 (9) | ref|XP_009788687.1| | 2e-44 | PREDICTED: phosphatidylinositol/phosphatidylcholine transfer protein SFH9-like |
| JMSF050P14 | Sequence | 659 | 014014 (9) | gb|KJB13923.1| | 8e-95 | hypothetical protein B456_002G101900 [Gossypium raimondii] | 755 | 014014 (9) | ref|XP_009788687.1| | 2e-81 | PREDICTED: phosphatidylinositol/phosphatidylcholine transfer protein SFH9-like |
This contig is upended
. : . : . : . : . : . :
JMSF030N18- GAGATCTACAAAACAGA
____________________________________________________________
consensus GAGATCTACAAAACAGA
. : . : . : . : . : . :
JMSF030N18- GGCAGAAGATCTGGGAAAAGAAAAAGGAAGGAAATGTTAGTCATATTACTATAAACAGAG
____________________________________________________________
consensus GGCAGAAGATCTGGGAAAAGAAAAAGGAAGGAAATGTTAGTCATATTACTATAAACAGAG
. : . : . : . : . : . :
JMSF030N18- GTCACAGCATCCATTGTCAGAGCTCCACCCTACCAAAGTAAAAGAATAGGAGGTGGAGAG
JMSF050P14- AGAGCTCCACCCTACCAAAGTAAAAGAATAGGAGGTGGAGAG
JMSF039B01- AGAGCTCCACCCTACCAAAGTAAAAGAATAGGAGGTGGAGAG
JMSF050O05- AGAGCTCCACCCTACCAAAGTAAAAGAATAGGAGGTGGAGAG
____________________________________________________________
consensus GTCACAGCATCCATTGTCAGAGCTCCACCCTACCAAAGTAAAAGAATAGGAGGTGGAGAG
. : . : . : . : . : . :
JMSF030N18- GAAAGTGAAATTCAAAAATCGGGTCTGAATCTAACGAACAGTTCTGGGTTTTAGAGAAAA
JMSF050P14- GAAAGTGAAATTCAAAAATCGGGTCTGAATCTAACGAACAGTTCTGGGTTTTAGAGAAAA
JMSF039B01- GAAAGTGAAATTCAAAAATCGGGTCTGAATCTAACGAACAGTTCTGGGTTTTAGAGAAAA
JMSF050O05- GAAAGTGAAATTCAAAAATCGGGTCTGAATCTAACGAACAGTTCTGGGTTTTAGAGAAAA
____________________________________________________________
consensus GAAAGTGAAATTCAAAAATCGGGTCTGAATCTAACGAACAGTTCTGGGTTTTAGAGAAAA
. : . : . : . : . : . :
JMSF030N18- AATGGTCTTAATTAAAGAAGAGATGATCAGGCAGTTAGGAGCTTTGATGGAAGATATTGA
JMSF050P14- AATGGTCTTAATTAAAGAAGAGATGATCAGGCAGTTAGGAGCTTTGATGGAAGATATTGA
JMSF039B01- AATGGTCTTAATTAAAGAAGAGATGATCAGGCAGTTAGGAGCTTTGATGGAGGATATTGA
JMSF050O05- AATGGTCTTAATTAAAGAAGAGATGATCAGGCAGTTAGGAGCTTTGATGGAAGATATTGA
____________________________________________________________
consensus AATGGTCTTAATTAAAGAAGAGATGATCAGGCAGTTAGGAGCTTTGATGGAAGATATTGA
. : . : . : . : . : . :
JMSF030N18- TGAATCACTGAAGATGACTTTCAAGAATGTGCACCAAGGGTTCCCAACTGAGACTCTGGT
JMSF050P14- TGAATCACTGAAGATGACTTTCAAGAATGTGCACCAAGGGTTCCCAACTGAGACTCTGGT
JMSF039B01- TGAATCACTGAAGATGACTTTCAAGAATGTGCACCAAGGGTTCCCAACTGAGACTCTGGT
JMSF050O05- TGAATCACTGAAGATGACTTTCAAGAATGTGCACCAAGGGTTCCCAACTGAGACTCTGGT
____________________________________________________________
consensus TGAATCACTGAAGATGACTTTCAAGAATGTGCACCAAGGGTTCCCAACTGAGACTCTGGT
. : . : . : . : . : . :
JMSF030N18- GAGGTTTCTAAAAGCAAGGGATGGAAATGTATCTAAAGCCCATAAAATGCTTACTGACTG
JMSF050P14- GAGGTTTCTAAAAGCAAGGGATGGAAATGTATCTAAAGCCCATAAAATGCTTACTGACTG
JMSF039B01- GAGGTTTCTAAAAGCAAGGGATGGAAATGTATCTAAAGCCCATAAAATGCTTACTGACTG
JMSF050O05- GAGGTTTCTAAAAGCAAGGGATGGAAATGTATCTAAAGCCCATAAAATGCTTACTGACTG
____________________________________________________________
consensus GAGGTTTCTAAAAGCAAGGGATGGAAATGTATCTAAAGCCCATAAAATGCTTACTGACTG
. : . : . : . : . : . :
JMSF030N18- TTTGAACTGGAGGCTCCAAAATGAGATTGATAATATATTAGCTAAGCCAATTGTCCCTTC
JMSF050P14- TTTGAACTGGAGGCTCCAAAATGAGATTGATAATATATTAGCTAAGCCAATTGTCCCTTC
JMSF039B01- TTTGAACTGGAGGCTCCAAAATGAGATTGATAATATATTAGCTAAGCCAATTGTCCCTTC
JMSF050O05- TTTGAACTGGAGGCTCCAAAATGAGATTGATAATATATTAGCTAAGCCAATTGTCCCTTC
____________________________________________________________
consensus TTTGAACTGGAGGCTCCAAAATGAGATTGATAATATATTAGCTAAGCCAATTGTCCCTTC
. : . : . : . : . : . :
JMSF030N18- TGAGTTGTACAGGGGAATTAGGGAATCTCAGCTTGTAGGGATGACTGGATACTCAAAAGA
JMSF050P14- TGAGTTGTACAGGGGAATTAGGGAATCTCAGCTTGTAGGGATGACTGGATACTCAAAAGA
JMSF039B01- TGAGTTGTACAGGGGAATTAGGGAATCTCAGCTTGTAGGGATGACTGGATACTCAAAAGA
JMSF050O05- TGAGTTGTACAGGGGAATTAGGGAATCTCAGCTTGTAGGGATGACTGGATACTCAAAAGA
rJMSF039B01+ GTAGGGATGACTGGATACTC-AAAGA
____________________________________________________________
consensus TGAGTTGTACAGGGGAATTAGGGAATCTCAGCTTGTAGGGATGACTGGATACTCAAAAGA
. : . : . : . : . : . :
JMSF030N18- GGGCATTCCTGTCATTGCTGTTGGTCTGGGGCTCAGCACATTTGATAGAGCATCTGTTCA
JMSF050P14- GGGCATTCCTGTCATTGCTGTTGGTCTGGGGCTCAGCACATTTGATAGAGCATCTGTTCA
JMSF039B01- GGGCATTCCTGTCATTGCTGTTGGTCTGGGGCTCAGCACATTTGATAGAGCATCTGTTCA
JMSF050O05- GGGCATTCCTGTCATTGCTGTTGGTCTGGGGCTCAGCACATTTGATAGAGCATCTGTTCA
rJMSF039B01+ GGGCATTCCTGTCATTGCTGTTGGTCTGGGGCTCAGCACATTTGATAGAGCATCTGTTCA
____________________________________________________________
consensus GGGCATTCCTGTCATTGCTGTTGGTCTGGGGCTCAGCACATTTGATAGAGCATCTGTTCA
. : . : . : . : . : . :
JMSF030N18- CTACTATGTTCAATCACACATACNGATGAATGAATATCGTGACCGAGTCATGTTGCCTTT
JMSF050P14- CTACTATGTTCAATCACACATACAGATGAATGAATATCGTGACCGAGTCATGTTGCCTTT
JMSF039B01- CTACTATGTTCAATCACACATACAGATGAATGAATATCGTGACCGAGTCATGTTGCCTTT
JMSF050O05- CTACTATGTTCAATCACACATACAGATGAATGAATATCGTGACCGAGTCATGTTGCCTTT
rJMSF039B01+ CTACTATGTTCAATCACACATACAGATGAATGAATATCGTGACCGAGTCATGTTGCCTTT
____________________________________________________________
consensus CTACTATGTTCAATCACACATACAGATGAATGAATATCGTGACCGAGTCATGTTGCCTTT
. : . : . : . : . : . :
JMSF030N18- TGCAACGAGAAAGTTTGGTCGGCACATTAGTACATGTATA
JMSF050P14- TGCAACGAGAAAGTTTGGTCGGCACATTAGTACATGTATAAAGATATTGGACATGACTGG
JMSF039B01- TGCAACGAGAAAGTTTGGTCGGCACATTAGTACATGTATAAAGATATTGGACATGACTGG
JMSF050O05- TGCAACGAGAAAGTTTGGTCGGCACATTAGTACATGTATAAAGATATTGGACATGACTGG
rJMSF039B01+ TGCAACGAGAAAGTTTGGTCGGCACATTAGTACATGTATAAAGATATTGGACATGACTGG
____________________________________________________________
consensus TGCAACGAGAAAGTTTGGTCGGCACATTAGTACATGTATAAAGATATTGGACATGACTGG
. : . : . : . : . : . :
JMSF050P14- TCTTAAGCTTTCTGCTCTAAATCATATTAAGCTATTGACTACTA--TCTGCCATTGATGA
JMSF039B01- TCTTAAGCTTTCTGCTCTAAATCATATTAAGCTATTGACTACTATCTCTGCCATTGATGA
JMSF050O05- TCTTAAGCTTTCTGCTCTAAATCATATTAAGCTATTGACTACTATCTCTGCCATTGATGA
rJMSF039B01+ TCTTAAGCTTTCTGCTCTAAATCATATTAAGCTATTGACTACTATCTCTGCCATTGATGA
rJMSF050P14+ AATCATATTAAGCTATTGACTACTA--TCTGCCATTGATGA
____________________________________________________________
consensus TCTTAAGCTTTCTGCTCTAAATCATATTAAGCTATTGACTACTATCTCTGCCATTGATGA
. : . : . : . : . : . :
JMSF050P14- TCTTAATTATCCTGA
JMSF039B01- TCTTAATTATCCTGA
JMSF050O05- TCTTAATTATCCTGAGAAGACCGAAGCATATTACATTGTT
rJMSF039B01+ TCTTAATTATCCTGAGAAGACCGAAGCATATTACATTGTTAATGCACCATATATATTTTC
rJMSF050P14+ TCTTAATTATCCTGAGAAGACCGAAGCATATTACATTGTTAATGCACCATATATATTTTC
rJMFF004P24+ CTGAGAAGACCGAAGCATATTACATTGTTAATGCACCATATATATTTTC
____________________________________________________________
consensus TCTTAATTATCCTGAGAAGACCGAAGCATATTACATTGTTAATGCACCATATATATTTTC
. : . : . : . : . : . :
rJMSF039B01+ AGCATGCTGGAAGGTAGTGCGTCCTCTTCTACAAGAAAGAACGAGAAAGAAAGTTCTAGT
rJMSF050P14+ AGCATGCTGGAAGGTAGTGCGTCCTCTTCTACAAGAAAGAACGAGAAAGAAAGTTCTAGT
rJMFF004P24+ AGCATGCTGGAAGGTAGTGCGTCCTCTTCTACAAGAAAGAACGAGAAAGAAAGTTCTAGT
rJMSF030N18+ CAAGAAAGAACGAGAAAGAAAGTTCTAGT
____________________________________________________________
consensus AGCATGCTGGAAGGTAGTGCGTCCTCTTCTACAAGAAAGAACGAGAAAGAAAGTTCTAGT
. : . : . : . : . : . :
rJMSF039B01+ GTTGTCAGGTTCAGGAAGAGATGACCTATTGAAAATAATGGATTATGCATCTCTCCCTCA
rJMSF050P14+ GTTGTCAGGTTCAGGAAGAGATGACCTATTGAAAATAATGGATTATGCATCTCTCCCTCA
rJMSF050O05+ ATAATGGATTATGCATCTCTCCCTCA
rJMFF004P24+ GTTGTCAGGTTCAGGAAGAGATGACCTATTGAAAATAATGGATTATGCATCTCTCCCTCA
rJMSF030N18+ GTTGTCAGGTTCAGGAAGAGATGACCTATTGAAAATAATGGATTATGCATCTCTCCCTCA
____________________________________________________________
consensus GTTGTCAGGTTCAGGAAGAGATGACCTATTGAAAATAATGGATTATGCATCTCTCCCTCA
. : . : . : . : . : . :
rJMSF039B01+ TTTCTGTAAAAGAGAGGGCTCAGGGTCTTCTCAGCATTCTAGGAATGGTACCATCGATGA
rJMSF050P14+ TTTCTGTAAAAGAGAGGGCTCAGGGTCTTCTCAGCATTCTAGGAATGGTACCATCGATGA
rJMSF050O05+ TTTCTGTAAAAGAGAGGGCTCAGGGTCTTCTCAGCATTCTAGGAATGGTACCATCGATGA
rJMFF004P24+ TTTCTGTAAAAGAGAGGGCTCAGGGTCTTCTCAGCATTCTAGGAATGGTACCATCGATGA
rJMSF030N18+ TTTCTGTAAAAGAGAGGGCTCAGGGTCTTCTCAGCATTCTAGGAATGGTACCATCGATGA
____________________________________________________________
consensus TTTCTGTAAAAGAGAGGGCTCAGGGTCTTCTCAGCATTCTAGGAATGGTACCATCGATGA
. : . : . : . : . : . :
rJMSF039B01+ TTGTTTTTCCTTGGACCATGACTGCCATCGGCAGCTTTATGATTATATTAAGCAGCAAGC
rJMSF050P14+ TTGTTTTTCCTTGGACCATGACTGCCATCGGCAGCTTTATGATTATATTAAGCAGCAAGC
rJMSF050O05+ TTGTTTTTCCTTGGACCATGACTGCCATCGGCAGCTTTATGATTATATTAAGCAGCAAGC
rJMFF004P24+ TTGTTTTTCCTTGGACCATGACTGCCATCGGCAGCTTTATGATTATATTAAGCAGCAAGC
rJMSF030N18+ TTGTTTTTCCTTGGACCATGACTGCCATCGGCAGCTTTATGATTATATTAAGCAGCAAGC
____________________________________________________________
consensus TTGTTTTTCCTTGGACCATGACTGCCATCGGCAGCTTTATGATTATATTAAGCAGCAAGC
. : . : . : . : . : . :
rJMSF039B01+ AGAGCTTGTGGAGCCCGCTGGACTAATCAAAGAAGGGTCGTTCCATGTTGCTGTCCCTGA
rJMSF050P14+ AGAGCTTGTGGAGCCCGCTGGACTAATCAAAGAAGGGTCGTTCCATGTTGCTGTCCCTGA
rJMSF050O05+ AGAGCTTGTGGAGCCCGCTGGACTAATCAAAGAAGGGTCGTTCCATGTTGCTGTCCCTGA
rJMFF004P24+ AGAGCTTGTGGAGCCCGCTGGACTAATCAAAGAAGGGTCGTTCCATGTTGCTGTCCCTGA
rJMSF030N18+ AGAGCTTGTGGAGCCCGCTGGACTAATCAAAGAAGGGTCGTTCCATGTTGCTGTCCCTGA
____________________________________________________________
consensus AGAGCTTGTGGAGCCCGCTGGACTAATCAAAGAAGGGTCGTTCCATGTTGCTGTCCCTGA
. : . : . : . : . : . :
rJMSF039B01+ ACCAGATCCTGATGATGCTAATATTGCTAAAACCTTGGCATCGGAATTTCAAAGACTCGG
rJMSF050P14+ ACCAGATCCTGATGATGCTAATATTGCTAAAACCTTGGCATCGGAATTTCAAAGACTCGG
rJMSF050O05+ ACCAGATCCTGATGATGCTAATATTGCTAAAACCTTGGCATCGGAATTTCAAAGACTCGG
rJMFF004P24+ ACCAGATCCTGATGATGCTAATATTGCTAAAACCTTGGCATCGGAATTTCAAAGACTCGG
rJMSF030N18+ ACCAGATCCTGATGATGCTAATATTGCTAAAACCTTGGCATCGGAATTTCAAAGACTCGG
____________________________________________________________
consensus ACCAGATCCTGATGATGCTAATATTGCTAAAACCTTGGCATCGGAATTTCAAAGACTCGG
. : . : . : . : . : . :
rJMSF039B01+ GGAGAATGGCATTTCCAAGTCGTTCCGTGAAGTTAAGATCAATGGTGAGGTCAAAGCTGA
rJMSF050P14+ GGAGAATGGCATTTCCAAGTCGTTCCGTGAAGTTAAGATCAATGGTGAGGTCAAAGCTGA
rJMSF050O05+ GGAGAATGGCATTTCCAAGTCGTTCCGTGAAGTTAAGATCAATGGTGAGGTCAAAGCTGA
rJMFF004P24+ GGAGAATGGCATTTCCAAGTCGTTCCGTGAAGTTAAGATCAATGGTGAGGTCAAAGCTGA
rJMSF030N18+ GGAGAATGGCATTTCCAAGTCGTTCCGTGAAGTTAAGATCAATGGTGAGGTCAAAGCTGA
____________________________________________________________
consensus GGAGAATGGCATTTCCAAGTCGTTCCGTGAAGTTAAGATCAATGGTGAGGTCAAAGCTGA
. : . : . : . : . : . :
rJMSF039B01+ ATAAATGAGTGCATATCGTTGACATACAGTTTGGGTGACTGTTCATCGTAATCCTGGGTA
rJMSF050P14+ ATAAATGAGTGCATATCGTTGACATACAGTTTGGGTGACTGTTCATCGTAATCCTGGGTA
rJMSF050O05+ ATAAATGAGTGCATATCGTTGACATACAGTTTGGGTGACTGTTCATCGTAATCCTGGGTA
rJMFF004P24+ ATAAATGAGTGCATATCGTTGACATACAGTTTGGGTGACTGTTCATCGTAATCCTGGGTA
rJMSF030N18+ ATAAATGAGTGCATATCGTTGACATACAGTTTGGGTGACTGTTCATCGTAATCCTGGGTA
____________________________________________________________
consensus ATAAATGAGTGCATATCGTTGACATACAGTTTGGGTGACTGTTCATCGTAATCCTGGGTA
. : . : . : . : . : . :
rJMSF039B01+ TTAGATGAGAGGATTTCACTAAGCTTAGATATGTTGTAGTATTGTATTACTGGCTTGCAT
rJMSF050P14+ TTAGATGAGAGGATTTCACTAAGCTTAGATATGTTGTAGTATTGTATTACTGGCTTGCAT
rJMSF050O05+ TTAGATGAGAGGATTTCACTAAGCTTAGATATGTTGTAGTATTGTATTACTGGCTTGCAT
rJMFF004P24+ TTAGATGAGAGGATTTCACTAAGCTTAGATATGTTGTAGTATTGTATTACTGGCTTGCAT
rJMSF030N18+ TTAGATGAGAGGATTTCACTAAGCTTAGATATGTTGTAGTATTGTATTACTGGCTTGCAT
____________________________________________________________
consensus TTAGATGAGAGGATTTCACTAAGCTTAGATATGTTGTAGTATTGTATTACTGGCTTGCAT
. : . : . : . : . : . :
rJMSF039B01+ CATCTCGATGCTGGAGTTAGGACGAG
rJMSF050P14+ CATCTCGATGCTGGAGTTAGGACGAGCAATGTTATAACTTGAATTTAGAGTGGGATAGTC
rJMSF050O05+ CATCTCGATGCTGGAGTTAGGACGAGCAATGTTATAACTTGAATTTAGAGTGGGATAGTC
rJMFF004P24+ CATCTCGATGCTGGAGTTAGGACGAGCAATGTTATAACTTGAATTTAGAGTGGGATAGTC
rJMSF030N18+ CATCTCGATGCTGGAGTTAGGACGAGCAATGTTATAACTTGAATTTAGAGTGGGATAGTC
____________________________________________________________
consensus CATCTCGATGCTGGAGTTAGGACGAGCAATGTTATAACTTGAATTTAGAGTGGGATAGTC
. : . : . : . : . : . :
rJMSF050P14+ GATCATGTTGTTTGAATATGGTATGGATGATGGTCATATTTTGCCTCTCTTCTG
rJMSF050O05+ GATCATGTTGTTTGAATATGGTATGGATGATGGTCATATTTTGCCTCTCTTCTGTTGTGA
rJMFF004P24+ GATCATGTTGTTTGAATATGGTATGGATGATGGTCATATTTTGCCTCTCTTCTGTTGTGA
rJMSF030N18+ GATCATGTTGTTTGAATATGGTATGGATGATGGTCATATTTTGCCTCTCTTCTGTTGTGA
____________________________________________________________
consensus GATCATGTTGTTTGAATATGGTATGGATGATGGTCATATTTTGCCTCTCTTCTGTTGTGA
. : . : . : . : . : . :
rJMSF050O05+ AATAGCCTATACTGCTCATTTGTTGACCATT
rJMFF004P24+ AATAGCCTATACTGCTCATTTGTTGACCATTTGTAATTGTTGG
rJMSF030N18+ AATAGCCTATACTGCTCATTTGTTGACCATTTGTAATTGTTGGTTTTGTTGATTAATGTT
____________________________________________________________
consensus AATAGCCTATACTGCTCATTTGTTGACCATTTGTAATTGTTGGTTTTGTTGATTAATGTT