Contig 014010:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF030J02+           TTGGAGTCNCCATGCTNGACGTTGTGAGAGCCAACACTTTCGTGGCAGAAGTTTTGGGA
                      ____________________________________________________________
consensus              TTGGAGTCNCCATGCTNGACGTTGTGAGAGCCAACACTTTCGTGGCAGAAGTTTTGGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF030J02+          CTAGATCCTAGGGAGGTTGATGTTCCTGTTGTTGGAGGTCATGCAGGGGTGACGATTTTG
                      ____________________________________________________________
consensus             CTAGATCCTAGGGAGGTTGATGTTCCTGTTGTTGGAGGTCATGCAGGGGTGACGATTTTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF030J02+          CCTNTTCTCTCTCAGGTCAAACCGCCATGCTCATTCACCCCCGAGGAAACAGAATTCCTG
                      ____________________________________________________________
consensus             CCTNTTCTCTCTCAGGTCAAACCGCCATGCTCATTCACCCCCGAGGAAACAGAATTCCTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF030J02+          ACAAAGCGCATTCAAGACGGTGGGACAGAAGTAGTTCAGGCGAAGGCCGGGGCAGGATCT
                      ____________________________________________________________
consensus             ACAAAGCGCATTCAAGACGGTGGGACAGAAGTAGTTCAGGCGAAGGCCGGGGCAGGATCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF030J02+          GCAACTTTATCAATGGCATACGCTGCTGTTAAATTTGCAGATTTATGCCTCCGGGGCTTA
                      ____________________________________________________________
consensus             GCAACTTTATCAATGGCATACGCTGCTGTTAAATTTGCAGATTTATGCCTCCGGGGCTTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF030J02+          AGAGGAGATGCTGGTATCGTGGCATGTGCCTACGTAGATTCTAAGGTGACAGNCNTCNCG
                      ____________________________________________________________
consensus             AGAGGAGATGCTGGTATCGTGGCATGTGCCTACGTAGATTCTAAGGTGACAGNCNTCNCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF030J02+          AGAAGTCGAGANCAGAGGAGAANTAGGGTTTTGGAGATTTTGCGAGGTTTATCATNCGNC
                      ____________________________________________________________
consensus             AGAAGTCGAGANCAGAGGAGAANTAGGGTTTTGGAGATTTTGCGAGGTTTATCATNCGNC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF043E19+                 ATGATTTACGACGTGAACTCGCCACTTTTCCGGTCCTTCCTTAGCCAGAAGGG
rJMSF030J02+          AACGAAGATGATTTACGACGNGAACTCGCCACTTTTCCGGTCCTTCCTTAGCCAGAAGGG
                      ____________________________________________________________
consensus             AACGAAGATGATTTACGACGTGAACTCGCCACTTTTCCGGTCCTTCCTTAGCCAGAAGGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF043E19+          AGGCACCTCCGACAAGAGGAAAACTGAAGAGCAGAGGCCAAAGGAACAGAGGCCAAAAGC
rJMSF030J02+          AGGCACCTCCGACAAGAGGAAAACTGAAGAGCAGAGGCCAAAGGANCAGAGGCCNAAAGC
                      ____________________________________________________________
consensus             AGGCACCTCCGACAAGAGGAAAACTGAAGAGCAGAGGCCAAAGGAACAGAGGCCAAAAGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF043E19+          AAATGAAAACAAACCAGTTATGAATGA                                 
rJMSF030J02+          AANNGAAAACAAACCAGTTATGAATGAGTATGTAGCTGTGTNATTTATGCAACTTAATGC
                      ____________________________________________________________
consensus             AAATGAAAACAAACCAGTTATGAATGAGTATGTAGCTGTGTNATTTATGCAACTTAATGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF030J02+          AAAACTGCTTNTATNTTAAGTAGCAAGCAAACTGTTTTAGAGCTGTATCTCATTTGTGCT
                      ____________________________________________________________
consensus             AAAACTGCTTNTATNTTAAGTAGCAAGCAAACTGTTTTAGAGCTGTATCTCATTTGTGCT