clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFN036O10 | Sequence | 622 | 014009 (6) | ref|XP_006348727.1| | 7e-78 | PREDICTED: cell division topological specificity factor homolog, chloroplastic- | |||||
JMSF020M24 | Sequence | 709 | 014009 (6) | ref|XP_006348727.1| | 4e-94 | PREDICTED: cell division topological specificity factor homolog, chloroplastic- | 726 | 014009 (6) | ref|XP_004239086.1| | 1e-101 | PREDICTED: cell division topological specificity factor homolog, chloroplastic |
JMSF030F09 | Sequence | 688 | 014009 (6) | ref|XP_006348727.1| | 7e-90 | PREDICTED: cell division topological specificity factor homolog, chloroplastic- | 704 | 014009 (6) | ref|XP_011075553.1| | 2e-85 | PREDICTED: cell division topological specificity factor homolog, chloroplastic- |
JMSF036O18 | Sequence | 646 | 022186 | 702 | 014009 (6) | ref|XP_006348727.1| | 2e-97 | PREDICTED: cell division topological specificity factor homolog, chloroplastic- |
This contig is upended
. : . : . : . : . : . :
JMFN036O10- TGAAAGCTTCCCACTCCCCAGCTAACCCTAACTACTCG
JMSF030F09- GCTGAGACTCTGAGAGGCTGAAAGCTTCCCACTCCCCAGCTAACCCTAACTACTCG
JMSF020M24- GAGACTCTGAGAGGCTGAAAGCTTCCCACTCCCCAGCTAACCCTAACTACTCG
____________________________________________________________
consensus GCTGAGACTCTGAGAGGCTGAAAGCTTCCCACTCCCCAGCTAACCCTAACTACTCG
. : . : . : . : . : . :
JMFN036O10- TCGTCCCCGAAACGTGTGACCTAGCAATTCATTTATCCACCAAAATCCTTCAGAGATAGG
JMSF030F09- TCGTCCCCGAAACGTGTGACCTAGCAATTCATTTATCCACCAAAATCCTTCAGAGATAGG
JMSF020M24- TCGTCCCCGAAACGTGTGACCTGGCAATTCATTTATCCACCAAAATCCTTCAGAGATAGG
____________________________________________________________
consensus TCGTCCCCGAAACGTGTGACCTAGCAATTCATTTATCCACCAAAATCCTTCAGAGATAGG
. : . : . : . : . : . :
JMFN036O10- ATTAGCAAAAGGAAATGGCAATATCGGGAGATCTCCGGGTCTCTGCTGCACTGGGTCGGT
JMSF030F09- ATTAGCAAAAGGAAATGGCAATATCGGGAGATCTCCGGGTCTCTGCTGCACTGGGTCGGT
JMSF020M24- ATTAGCAAAAGGAAATGGCAATATCGGGAGATCTCCGGGTCTCTGCTGCACTGGGTCGGT
____________________________________________________________
consensus ATTAGCAAAAGGAAATGGCAATATCGGGAGATCTCCGGGTCTCTGCTGCACTGGGTCGGT
. : . : . : . : . : . :
JMFN036O10- ATCCGAACAACTCAATTCGGAGCTCAAAGCATCATCCTTCCCCTTCCAAGGTAGACTTTA
JMSF030F09- ATCCGAACAACTCAATTCGGAGCTCAAAGCATCATCCTTCCCCTTCCAAGGTAGACTTTA
JMSF020M24- ATCCGAACAACTCAATTCGGAGCTCAAAGCATCATCCTTCCCCTTCCAAGGTAGACTTTA
____________________________________________________________
consensus ATCCGAACAACTCAATTCGGAGCTCAAAGCATCATCCTTCCCCTTCCAAGGTAGACTTTA
. : . : . : . : . : . :
JMFN036O10- GTGTCTTCCTTAATGGCGGTTCTAATGCTTCCGAGCTTGTGTTTAGAGGGTCACGCGCAG
JMSF030F09- GTGTCTTCCTTAATGGCGGTTCTAATGCTTCCGAGCTTGTGTTTAGAGGGTCACGCGCAG
JMSF020M24- GTGTCTTCCTTAATGGCGGTTCTAATGCTTCCGAGCTTGTGTTTAGAGGGTCACGCGCAG
rJMSF036O18+ TTCCGAGCTTGTGTTTAGAGGGTCACGCGCAG
rJMSF020M24+ TAATGCTTCCGAGCTTGTGTTTAGAGGGTCACGCGCAG
____________________________________________________________
consensus GTGTCTTCCTTAATGGCGGTTCTAATGCTTCCGAGCTTGTGTTTAGAGGGTCACGCGCAG
. : . : . : . : . : . :
JMFN036O10- CACCTGATGGACATAATTTGCAATGTCACGCCAAAAAGCCCATTGGGGTCCTTGGGGATT
JMSF030F09- CACCTGATGGACATAATTTGCAATGTCACGCCAAAAAGCCCATTGGGGTCCTTGGGGATT
JMSF020M24- CACCTGATGGACATAATTTGCAATGTCACGCCAAAAAGCCCATTGGGGTCCTTGGGGATT
rJMSF036O18+ CACCTGATGGACA-CATTTGCAATGTCACGCCAAAAAGCCCATTGGGGTCCTTGGGGATT
rJMSF020M24+ CACCTGATGGACATAATTTGCAATGTCACGCCAAAAAGCCCATTGGGGTCCTTGGGGATT
____________________________________________________________
consensus CACCTGATGGACATAATTTGCAATGTCACGCCAAAAAGCCCATTGGGGTCCTTGGGGATT
. : . : . : . : . : . :
JMFN036O10- ACAAGCTGTCCTCGAATTTCATGGGCCAAGAGTTCGACAGCTTCCTTCTTAATGCTATCA
JMSF030F09- ACAAGCTGTCCTCGAATTTCATGGGCCAAGAGTTCGACAGCTTCCTTCTTAATGCTATCA
JMSF020M24- ACAAGCTGTCCTCGAATTTCATGGGCCAAGAGTTCGATAGCTTCCTTCTTAATGCTATCA
rJMSF036O18+ ACAAGCTGTCCTCGAATTTCATGGGCCAAGAGTTCGACAGCTTCCTTCTTAATGCTATCA
rJMSF020M24+ ACAAGCTGTCCTCGAATTTCATGGGCCAAGAGTTCGATAGCTTCCTTCTTAATGCTATCA
rJMSF030F09+ TTTCATGGGCCAAGAGTTCGACAGCTTCCTTCTTAATGCTATCA
____________________________________________________________
consensus ACAAGCTGTCCTCGAATTTCATGGGCCAAGAGTTCGACAGCTTCCTTCTTAATGCTATCA
. : . : . : . : . : . :
JMFN036O10- ACATGAGCTTTTTCGAGCGCCTAAGCTTGGCTTGGAAGATAATGTTCCCACCATCGCTGT
JMSF030F09- ACATGAGCTTTTTCGAGCGCCTAAGCTTGGCTTGGAAGATAATGTTCCCACCATCGCTGT
JMSF020M24- ACATGAGCTTTTTCGAGCGCCTAAGCTTGGCTTGGAAGATAATGTTCCCACCATCGCTGT
rJMSF036O18+ ACATGAGCTTTTTCGAGCGCCTAAGCTTGGCTTGGAAGATAATGTTCCCACCATCGCTGT
rJMSF020M24+ ACATGAGCTTTTTCGAGCGCCTAAGCTTGGCTTGGAAGATAATGTTCCCACCATCGCTGT
rJMSF030F09+ ACATGAGCTTTTTCGAGCGCCTAAGCTTGGCTTGGAAGATAATGTTCCCACCATCGCTGT
____________________________________________________________
consensus ACATGAGCTTTTTCGAGCGCCTAAGCTTGGCTTGGAAGATAATGTTCCCACCATCGCTGT
. : . : . : . : . : . :
JMFN036O10- CAAGAAGGAATTCCAATGCAAACATTGCCAAACAGCGGTTGAAGATGATCCTCTTCTCCG
JMSF030F09- CAAGAAGGAATTCCAATGCAAACATTGCCAAACAGCGGTTGAAGATGATCCTCTTCTCCG
JMSF020M24- CAAGAAGGAATTCCAATGCAAACATTGCCAAACAGCGGTTGAAGATGATCCTCTTCTCCG
rJMSF036O18+ CAAGGAGGAATTCCAATGCAAACATTGCCAAACAGCGGTTGAAGATGATCCTCTTCTCCG
rJMSF020M24+ CAAGAAGGAATTCCAATGCAAACATTGCCAAACAGCGGTTGAAGATGATCCTCTTCTCCG
rJMSF030F09+ CAAGAAGGAATTCCAATGCAAACATTGCCAAACAGCGGTTGAAGATGATCCTCTTCTCCG
____________________________________________________________
consensus CAAGAAGGAATTCCAATGCAAACATTGCCAAACAGCGGTTGAAGATGATCCTCTTCTCCG
. : . : . : . : . : . :
JMFN036O10- ATCGATGTGCAGTGAGCGACGAGGCCAAGCAGAAGATAGTCAGCAACATTGTGAGTGTCC
JMSF030F09- ATCGATGTGCAGTGAGCGACGAGGCCAAGCAGAAGATAGTCAGCAACATTGTGAGTGTCC
JMSF020M24- ATCGATGTGCAGTGAGCGACGAGGCCAAGCAGAAGATAGTCAGCAACATTGTGAGTGTCC
rJMSF036O18+ ATCGATGTGCAGTGAGCGACGAGGCCAAGCAGAAGATAGTCAGCAACATTGTGAGTGTCC
rJMSF020M24+ ATCGATGTGCAGTGAGCGACGAGGCCAAGCAGAAGATAGTCAGCAACATTGTGAGTGTCC
rJMSF030F09+ ATCGATGTGCAGTGAGCGACGAGGCCAAGCAGAAGATAGTCAGCAACATTGTGAGTGTCC
____________________________________________________________
consensus ATCGATGTGCAGTGAGCGACGAGGCCAAGCAGAAGATAGTCAGCAACATTGTGAGTGTCC
. : . : . : . : . : . :
JMFN036O10- TCTCCGATTTCGTGGAGATAGAATCGCAGGATAAAGTTCAGCTG
JMSF030F09- TCTCCGATTTCGTGGAGATAGAATCGCAGGATAAAGTTCAGCTGAGTGTCTCCACAGACC
JMSF020M24- TCTCCGATTTCGTGGAGATAGAATCGCAGGATAAAGTTCAGCTGAGTGTCTCCACAGACC
rJMSF036O18+ TCTCCGATTTCGTGGAGATAGAATCGCAGGATAAAGTTCAGCTGAGTGTCTCCACAGACC
rJMSF020M24+ TCTCCGATTTCGTGGAGATAGAATCGCAGGATAAAGTTCAGCTGAGTGTCTCCACAGACC
rJMSF030F09+ TCTCCGATTTCGTGGAGATAGAATCGCAGGATAAAGTTCAGCTGAGTGTCTCCACAGACC
____________________________________________________________
consensus TCTCCGATTTCGTGGAGATAGAATCGCAGGATAAAGTTCAGCTGAGTGTCTCCACAGACC
. : . : . : . : . : . :
JMSF030F09- CCGACCTCGGGACTATCTACTCTGTCACGGTC
JMSF020M24- CCGACCTCGGGACTATCTACTCTGTCACGGTCCCTGNTCGGCGCGTACGATCAGA
rJMSF036O18+ CCGACCTCGGGACTATCTACTCTGTCACGGTCCCTGTTCGGCGCGTACGATCAGAGTACC
rJMSF020M24+ CCGACCTCGGGACTATCTACTCTGTCACGGTCCCTGTTCGGCGCGTACGATCAGAGTACC
rJMSF030F09+ CCGACCTCGGGACTATCTACTCTGTCACGGTCCCTGTTCGGCGCGTACGATCAGAGTACC
____________________________________________________________
consensus CCGACCTCGGGACTATCTACTCTGTCACGGTCCCTGTTCGGCGCGTACGATCAGAGTACC
. : . : . : . : . : . :
rJMSF036O18+ AATTGGATGATCCAACCGGAACAATCACAAATGTTGAGTACAAAGATACTGGAGAAGACT
rJMSF020M24+ AATTGGATGATCCAACCGGAACAATCACAAATGTTGAGTACAAAGATACTGGAGAAGACT
rJMSF030F09+ AATTGGATGATCCAACCGGAACAATCACAAATGTTGAGTACAAAGATACTGGAGAAGACT
____________________________________________________________
consensus AATTGGATGATCCAACCGGAACAATCACAAATGTTGAGTACAAAGATACTGGAGAAGACT
. : . : . : . : . : . :
rJMSF036O18+ CTGGTTCTGTCGATGTCAAGTTTGATTTCTACATTCCTGGGTAGAATTTAGAAGAGCTCA
rJMSF020M24+ CTGGTTCTGTCGATGTCAAGTTTGATTTCTACATTCCTGGGTAGAATTTAGAAGAGCTCA
rJMSF030F09+ CTGGTTCTGTCGATGTCAAGTTTGATTTCTACATTCCTGGGTAGAATTTAGAAGAGCTCA
____________________________________________________________
consensus CTGGTTCTGTCGATGTCAAGTTTGATTTCTACATTCCTGGGTAGAATTTAGAAGAGCTCA
. : . : . : . : . : . :
rJMSF036O18+ ATGATTGCCAATCTGGGCGGGAAGAAGGAATGCTTGTTTGTCAATCACAAGTTTTTATTT
rJMSF020M24+ ATGATTGCCAATCTGGGCGGGAAGAAGGAATGCTTGTTTGTCAATCACAAGTTTTTATTT
rJMSF030F09+ ATGATTGCCAATCTGGGCGGGAAGAAGGAATGCTTGTTTGTCAATCACAAGTTTTTATTT
____________________________________________________________
consensus ATGATTGCCAATCTGGGCGGGAAGAAGGAATGCTTGTTTGTCAATCACAAGTTTTTATTT
. : . : . : . : . : . :
rJMSF036O18+ TCATTTCATATTTTCCTTCAGCATGGCAACTGGCTACTGCTATTCTTGTGTTTTCCATCT
rJMSF020M24+ TCATTTCATATTTTCCTTCAGCATGGCAACTGGCTACTGCTATTCTTGTGTTTTCCATCT
rJMSF030F09+ TCATTTCATATTTTCCTTCAGCATGGCAACTGGCTACTGCTATTCTTGTGTTTTCCATCT
____________________________________________________________
consensus TCATTTCATATTTTCCTTCAGCATGGCAACTGGCTACTGCTATTCTTGTGTTTTCCATCT
. : . : . : . : . : . :
rJMSF036O18+ TGTGGGATGAG
rJMSF020M24+ TGTGGGATGAGTTAATTAGGTTTGTATA
rJMSF030F09+ TGTGGGATGAGTTAATTAGGTTTGTATATATAATATTTTTTTTTCTACCAGTGTTTAAAA
____________________________________________________________
consensus TGTGGGATGAGTTAATTAGGTTTGTATATATAATATTTTTTTTTCTACCAGTGTTTAAAA
. : . : . : . : . : . :
rJMSF030F09+ GTGTTGCTTTTAGTACCATACTGCCTTTCCTCACAAGAATGGTATGCCAATCAAGACATA
____________________________________________________________
consensus GTGTTGCTTTTAGTACCATACTGCCTTTCCTCACAAGAATGGTATGCCAATCAAGACATA