Contig 014007:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF040B10Sequence572014007 (4)emb|CDP10606.1|2e-48unnamed protein product [Coffea canephora]630014007 (4)ref|XP_009611901.1|136PREDICTED: uncharacterized protein LOC104105344 [Nicotiana tomentosiformis]
JMSF030A06Sequence679014007 (4)emb|CDP10606.1|2e-60unnamed protein product [Coffea canephora]740014007 (4)emb|CDP10606.1|1e-42unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMFF040B10-                                                                  CTTGC
JMSF030A06-                                                                     GC
                      ____________________________________________________________
consensus                                                                    CTTGC
 
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JMFF040B10-           GATCTTCTCGGCCATTGTTTTTAATGAGCAATCGAGTCGTCTGAACTCACTAGCTATACT
JMSF030A06-           GATCTTCTCGGCCATTGTTTTTAATGAGCAATCGAGTCGTCTGAACTCACTAGCTATACT
                      ____________________________________________________________
consensus             GATCTTCTCGGCCATTGTTTTTAATGAGCAATCGAGTCGTCTGAACTCACTAGCTATACT
 
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JMFF040B10-           ATCGCCGGAGAGATGGTGGAGGATGTTGGCGGAGCGCCGTTCCCGGTGGTGTTCTTCGAC
JMSF030A06-           ATCGCCGGAGAGATGGTGGAGGATGTTGGCGGAGCGCCGTTCCCGGTGGTGTTCTTCGAC
                      ____________________________________________________________
consensus             ATCGCCGGAGAGATGGTGGAGGATGTTGGCGGAGCGCCGTTCCCGGTGGTGTTCTTCGAC
 
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JMFF040B10-           GGCGAGCAGGAGATGGATATCGGGGACGTCTATATAAACCCGATGATGGATTTCAAGGCT
JMSF030A06-           GGCGAGCAGGAGATGGATATCGGGGACGTCTATATAAACCCGATGATGGATTTCAAGGCT
                      ____________________________________________________________
consensus             GGCGAGCAGGAGATGGATATCGGGGACGTCTATATAAACCCGATGATGGATTTCAAGGCT
 
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JMFF040B10-           TTCCAGCTTATGCTTAGCCAGAGGATTGGGATTTCCCCTAACCAGATTTCGATTTACCTG
JMSF030A06-           TTCCAGCTTATGCTTAGCCAGAGGATTGGGATTTCCCCTAACCAGATTTCGATTTACCTG
                      ____________________________________________________________
consensus             TTCCAGCTTATGCTTAGCCAGAGGATTGGGATTTCCCCTAACCAGATTTCGATTTACCTG
 
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JMFF040B10-           TGTAACAGCAGCAAACCGGACCGCAAGAAGATTCCAATCACCGGGAAGGTAAACTTCGCG
JMSF030A06-           TGTAACAGCAGCAAACCGGACCGCAAGAAGATTCCAATCACCGGGAAGGTAAACTTCGCG
rJMSF030A06+                                                  CCGGGAAGGTAAACTTCGCG
                      ____________________________________________________________
consensus             TGTAACAGCAGCAAACCGGACCGCAAGAAGATTCCAATCACCGGGAAGGTAAACTTCGCG
 
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JMFF040B10-           TTCATCGCTCGCGAGAAGGACTGCTACTTCCTCGCGGTGTTGAAGAGGTCGCGGAAGTCG
JMSF030A06-           TTCATCGCTCGCGAGAAGGACTGCTACTTCCTCGCGGTGTTGAAGAGGTCGCGGAAGTCG
rJMSF030A06+          TTCATCGCTCGCGAGAAGGACTGCTACTTCCTCGCGGTGTTGAAGAGGTCGCGGAAGTCG
                      ____________________________________________________________
consensus             TTCATCGCTCGCGAGAAGGACTGCTACTTCCTCGCGGTGTTGAAGAGGTCGCGGAAGTCG
 
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JMFF040B10-           CGGAACCGGAAGGCGAAGATGAACGGCGGCGCGGTGGTGGATTACGGAGATTATATGTCG
JMSF030A06-           CGGAACCGGAAGGCGAAGATGAACGGCGGCGCGGTGGTGGATTACGGAGATTATATGTCG
rJMFF040B10+                       CGAAGATGAACGGCGGCGCGGTGGTGGATTACGGAGATTATATGTCG
rJMSF030A06+          CGGAACCGGAAGGCGAAGATGAACGGCGGCGCGGTGGTGGATTACGGAGATTATATGTCG
                      ____________________________________________________________
consensus             CGGAACCGGAAGGCGAAGATGAACGGCGGCGCGGTGGTGGATTACGGAGATTATATGTCG
 
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JMFF040B10-           GAGAACGACTTCGCGCATTCTCCTCAGCCGGAGAATTTGATTTTGCTACGCCGTAACCAT
JMSF030A06-           GAGAACGACTTCGCGCATTCTCCTCAGCCGGAGAATTTGATTTTGCTACGCCGTAACCAT
rJMFF040B10+          GAGAACGACTTCGCGCATTCTCCTCAGCCGGAGAATTTGATTTTGCTACGCCGTAACCAT
rJMSF030A06+          GAGAACGACTTCGCGCATTCTCCTCAGCCGGAGAATTTGATTTTGCTACGCCGTAACCAT
                      ____________________________________________________________
consensus             GAGAACGACTTCGCGCATTCTCCTCAGCCGGAGAATTTGATTTTGCTACGCCGTAACCAT
 
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JMFF040B10-           CCGCCGGAGATGAGCGTGAACATGAACCCGGCGGATCCGGTATTCCCCGGGTTCGGACCT
JMSF030A06-           CCGCCGGAGATGAGCGTGAACATGAACCCGGCGGATCCGGTATTCCCCGGGTTCGGACCT
rJMFF040B10+          CCGCCGGAGATGAGCGTGAACATGAACCCGGCGGATCCGGTATTCCCCGGGTTCGGACCT
rJMSF030A06+          CCGCCGGAGATGAGCGTGAACATGAACCCGGCGGATCCGGTATTCCCCGGGTTCGGACCT
                      ____________________________________________________________
consensus             CCGCCGGAGATGAGCGTGAACATGAACCCGGCGGATCCGGTATTCCCCGGGTTCGGACCT
 
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JMFF040B10-           TCGTACTACGACCAGATTTCTCAGGCG                                 
JMSF030A06-           TCGTACTACGACCAGATTTCTCAGGCGGAACTCGCCGGCCTGAACGATAGGCTGCACAAT
rJMFF040B10+          TCGTACTACGACCAGATTTCTCAGGCGGAACTCGCCGGCCTGAACGATAGGCTGCACAAT
rJMSF030A06+          TCGTACTACGACCAGATTTCTCAGGCGGAACTCGCCGGCCTGAACGATAGGCTGCACAAT
                      ____________________________________________________________
consensus             TCGTACTACGACCAGATTTCTCAGGCGGAACTCGCCGGCCTGAACGATAGGCTGCACAAT
 
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JMSF030A06-           TTCCAGATTCAGAGGGAGAATTACGCGATGGCGATGGCGAGAATGAATCCGAACCTGATG
rJMFF040B10+          TTCCAGATTCAGAGGGAGAATTACGCGATGGCGATGGCGAGAATGAATCCGAACCTGATG
rJMSF030A06+          TTCCAGATTCAGAGGGAGAATTACGCGATGGCGATGGCGAGAATGAATCCGAACCTGATG
                      ____________________________________________________________
consensus             TTCCAGATTCAGAGGGAGAATTACGCGATGGCGATGGCGAGAATGAATCCGAACCTGATG
 
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JMSF030A06-           CATCACGCGATTCCGA                                            
rJMFF040B10+          CATCACGCGATTCCGAGCCCTAATTTGGAATTGGATCCAAACACTTTCCCGAGAATCGAA
rJMSF030A06+          CATCACGCGATTCCGAGCCCTAATTTGGAATTGGATCCAAACACTTTCCCGAGAATCGAA
                      ____________________________________________________________
consensus             CATCACGCGATTCCGAGCCCTAATTTGGAATTGGATCCAAACACTTTCCCGAGAATCGAA
 
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rJMFF040B10+          GATACCTACCGGACGGTAACGGCGAAAACGGACGCAACTACCTGCAAGGAATGTATCAGT
rJMSF030A06+          GATACCTACCGGACGGTAACGGCGAAAACGGACGCAACTACCTGCAAGGAATGTATCAGT
                      ____________________________________________________________
consensus             GATACCTACCGGACGGTAACGGCGAAAACGGACGCAACTACCTGCAAGGAATGTATCAGT
 
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rJMFF040B10+          GCGAAGAACGGAAAACCCGCCGCGTTCCACCCGTGTGTAAACGATCCGGTCCTCAAAGGA
rJMSF030A06+          GCGAAGAACGGAAAACCCGCCGCGTTCCACCCGTGTGTAAACGATCCGGTCCTCAAAGGA
                      ____________________________________________________________
consensus             GCGAAGAACGGAAAACCCGCCGCGTTCCACCCGTGTGTAAACGATCCGGTCCTCAAAGGA
 
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rJMFF040B10+          TGGTTCCGGAGTCGGGCCGGGCCGGTTCGACGCACGCCAAAAACTCCTCGTTGAACGTTC
rJMSF030A06+          TGGTTCCGGAGTCGGGCCGGGCCGGTTCGACGCACGCCAAAAACTCCTCGTTGAACGTTC
                      ____________________________________________________________
consensus             TGGTTCCGGAGTCGGGCCGGGCCGGTTCGACGCACGCCAAAAACTCCTCGTTGAACGTTC
 
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rJMFF040B10+          ACGTGGTTTTATCTTCTCTTTCATCTTCCCCTTTATTTTCTGTTTTCGGTTTTCGTGTAT
rJMSF030A06+          ACGTGGTTTTATCTTCTCTTTCATCTTCCCCTTTATTTTCTCTTTTCGGTTTTCGTGTAT
                      ____________________________________________________________
consensus             ACGTGGTTTTATCTTCTCTTTCATCTTCCCCTTTATTTTCTGTTTTCGGTTTTCGTGTAT
 
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rJMFF040B10+          AGAATAGCGCTGGGAAGCTGCAATCCGCTGTGGGCGGCTAC                   
rJMSF030A06+          AGAATAGCGCTGGGAAGCTGCAATCCGCTGTGGGCGGCTACATTGTAGACTTTATTATTT
                      ____________________________________________________________
consensus             AGAATAGCGCTGGGAAGCTGCAATCCGCTGTGGGCGGCTACATTGTAGACTTTATTATTT