Contig 014006:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN030N09Sequence614014006 (2)sp|P46423.1|GSTF_HYOMU1e-59RecName: Full=Glutathione S-transferase; AltName: Full=25 kDa auxin-binding pro
JMSF029P21Sequence631003301 (21)sp|P46423.1|GSTF_HYOMU2e-94RecName: Full=Glutathione S-transferase; AltName: Full=25 kDa auxin-binding pro609014006 (2)gb|ABQ96852.1|2e-69glutathione S-transferase [Solanum commersonii]

Alignment

This contig is upended


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rJMSF029P21- TAATGCAAT
                      ____________________________________________________________
consensus TAATGCAAT
 
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rJMSF029P21- CACACATAAGCCAGCTTAATCTCACATATGGGAATCCACACAACCAAAAACAGACACGTC
                      ____________________________________________________________
consensus CACACATAAGCCAGCTTAATCTCACATATGGGAATCCACACAACCAAAAACAGACACGTC
 
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rJMSF029P21- CAGTACAAGATAACAAGATGAACATCCAAAACATAAACCACACCAAAGTGGTTACGTTGT
                      ____________________________________________________________
consensus CAGTACAAGATAACAAGATGAACATCCAAAACATAAACCACACCAAAGTGGTTACGTTGT
 
. : . : . : . : . : . :
JMFN030N09+ TTTGAAATTATCCCGATTTCTGTTTGA
rJMSF029P21- TTGATTTACGAGAAATTAAAAGTCTGCAACCCCTTTGAAATTATCCCGATTTCTGTTTGA
                      ____________________________________________________________
consensus TTGATTTACGAGAAATTAAAAGTCTGCAACCCCTTTGAAATTATCCCGATTTCTGTTTGA
 
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JMFN030N09+ GCAATTCTTGAACCTTTGACCAGGCAGGCCTGGCCAAAATATCGGCGACCCATTGGGAAA
rJMSF029P21- GCAATTCTTGAACCTTTGACCAGGCAGGCCTGGCCAAAATATCGGCGACCCATTGGGAAA
                      ____________________________________________________________
consensus GCAATTCTTGAACCTTTGACCAGGCAGGCCTGGCCAAAATATCGGCGACCCATTGGGAAA
 
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JMFN030N09+ CTTTTGGGCGTGCATCAAACAGGGCCTTAACTTTAGTAGCCATGAGGTAGTTTATGAGAG
rJMSF029P21- CTTTTGGGCGTGCATCAAACAGGGCCTTAACTTTAGTAGCCATGAGGTAGTTTATGAGAG
                      ____________________________________________________________
consensus CTTTTGGGCGTGCATCAAACAGGGCCTTAACTTTAGTAGCCATGAGGTAGTTTATGAGAG
 
. : . : . : . : . : . :
JMFN030N09+ GAATGTGGTGAAGATCGACCAAAGTGAAGCAGTCTCCGCCCAGGTATTCCGATTCCTTCA
rJMSF029P21- GAATGTGGTGAAGATCGACCAAAGTGAAGCAGTCTCCGCCCAGGTATTCCGATTCCTTCA
                      ____________________________________________________________
consensus GAATGTGGTGAAGATCGACCAAAGTGAAGCAGTCTCCGCCCAGGTATTCCGATTCCTTCA
 
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JMFN030N09+ ACCGTGCCTCGTAGACATCGAGAACTTTACCTAGTTGCTCCTCGTACTGCGCCACCACCA
rJMSF029P21- ACCGTGCCTCGTAGACATCGAGAACTTTACCTAGTTGCTCCTCGTACTGCGCCACCACCA
                      ____________________________________________________________
consensus ACCGTGCCTCGTAGACATCGAGAACTTTACCTAGTTGCTCCTCGTACTGCGCCACCACCA
 
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JMFN030N09+ CATCGTCCGCCGTCATGCCCATTAACGGCTTTATAACGGTCTCGTAGCTGAGCTTGGAAG
rJMSF029P21- CATCGTCCGCCGTCATGCCCATTAACGGCTTTATAACGGTCTCGTAGCTGAGCTTGGAAG
                      ____________________________________________________________
consensus CATCGTCCGCCGTCATGCCCATTAACGGCTTTATAACGGTCTCGTAGCTGAGCTTGGAAG
 
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JMFN030N09+ CTGCAGGGTCGAATTTCTGAGCCTCAACCTCCATCCACACCGACATGATCGCCATCTTCT
rJMSF029P21- CTGCAGGGTCGAATTTCTGAGCCTCAACCTCCATCCACACCGACATGATCGCCATCTTCT
                      ____________________________________________________________
consensus CTGCAGGGTCGAATTTCTGAGCCTCAACCTCCATCCACACCGACATGATCGCCATCTTCT
 
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JMFN030N09+ TGTGATCTGGGACGATCAGCTG
rJMSF029P21- TGTGATCTGGGACGATCAGCTGCGTCCCCTTGTCAACATACGTGTGCGCGATGTACTGTG
                      ____________________________________________________________
consensus TGTGATCTGGGACGATCAGCTGCGTCCCCTTGTCAACATACGTGTGCGCGATGTACTGTG