Contig 014000:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF029B24Sequence664013403 (3)ref|XP_009774004.1|7e-67PREDICTED: protein fluG [Nicotiana sylvestris]723014000 (2)emb|CAN73462.1|9e-88hypothetical protein VITISV_033907 [Vitis vinifera]
JMSF048G23Sequence678014000 (2)gb|AFN42875.1|6e-22glutamine synthetase [Camellia sinensis]619002947 (2)

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF048G23- GGTGTTTCTTTTCCGCCCTTTGGTGTCCGCTCTTCAC
                      ____________________________________________________________
consensus GGTGTTTCTTTTCCGCCCTTTGGTGTCCGCTCTTCAC
 
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JMSF048G23- TGTCTAGCTGTCGTTCTCGCCAGGGAAGAGGTGCGCTTGTCGATGGCCGTTCGAGGAGGG
                      ____________________________________________________________
consensus TGTCTAGCTGTCGTTCTCGCCAGGGAAGAGGTGCGCTTGTCGATGGCCGTTCGAGGAGGG
 
. : . : . : . : . : . :
JMSF048G23- GTAGGTCCGGCAGGTCGTTCTTGCCGACGACTCCGCGGTCGGGTGTTTCGCACAGAGTGG
                      ____________________________________________________________
consensus GTAGGTCCGGCAGGTCGTTCTTGCCGACGACTCCGCGGTCGGGTGTTTCGCACAGAGTGG
 
. : . : . : . : . : . :
JMSF048G23- CGGAGGCATCACGAGGGCTCAGACGCGGGGTGGCCGGGATTGCATCGAGGGTTTCAATGG
                      ____________________________________________________________
consensus CGGAGGCATCACGAGGGCTCAGACGCGGGGTGGCCGGGATTGCATCGAGGGTTTCAATGG
 
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JMSF048G23- GGTATGCGAGGGGGAAACCGAGCTCCATGTGACAATGTTTTCCTGTAAAAATCTGGTAGG
                      ____________________________________________________________
consensus GGTATGCGAGGGGGAAACCGAGCTCCATGTGACAATGTTTTCCTGTAAAAATCTGGTAGG
 
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JMSF048G23- ACTGAAGTTCTACTTGAGCATGCCTCCCGCAAAGCCAGATGGTCGGACTTCTTAACTTTG
                      ____________________________________________________________
consensus ACTGAAGTTCTACTTGAGCATGCCTCCCGCAAAGCCAGATGGTCGGACTTCTTAACTTTG
 
. : . : . : . : . : . :
JMSF048G23- AAGGAGGGGACGAATGTTTCTAGAGTAATAGTTGATGCGTGGTGTTCAGTGCTCAATGCG
                      ____________________________________________________________
consensus AAGGAGGGGACGAATGTTTCTAGAGTAATAGTTGATGCGTGGTGTTCAGTGCTCAATGCG
 
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JMSF048G23- ACGGAGAAACCTAGGAGATGGTGGGGGGGTGCCTACTCGCCTGTTTGTCTCGACGGCCGC
                      ____________________________________________________________
consensus ACGGAGAAACCTAGGAGATGGTGGGGGGGTGCCTACTCGCCTGTTTGTCTCGACGGCCGC
 
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JMSF048G23- TACGATTGCAGCTGGACTGACATCTTATGGCTAGTATTGGGGGAGACAAAACCAAGAGGC
rJMSF029B24+ TTGGGGGAGACAAAACCGAGAGGC
                      ____________________________________________________________
consensus TACGATTGCAGCTGGACTGACATCTTATGGCTAGTATTGGGGGAGACAAAACCGAGAGGC
 
. : . : . : . : . : . :
JMSF048G23- TACACTAAGAACTGCCTGTTCACCTGGAGTTCCATACGGCTTTTCCGACTTTGAGGTTAA
rJMSF029B24+ TCCACTAAGAACAGCCACTTCACCTGGAGTTCCAAATGGCTTTACCAACTTTGAGGTTAA
                      ____________________________________________________________
consensus TCCACTAAGAACTGCCTGTTCACCTGGAGTTCCATATGGCTTTTCCGACTTTGAGGTTAA
 
. : . : . : . : . : . :
JMSF048G23- GGTGTTTGATGGATGTGCAAACCCATACCTGGGTCTGGCTTCCATAATTCCTGCTGGGAT
rJMSF029B24+ GGTGTNTGATGGATGTGCAAACCCATTTCTCGGTCTGGCTTCCATCATTGCTGCTGGGAT
                      ____________________________________________________________
consensus GGTGTTTGATGGATGTGCAAACCCATTTCTGGGTCTGGCTTCCATCATTGCTGCTGGGAT
 
. : . : . : . : . : . :
JMSF048G23- TGACG
rJMSF029B24+ TGACGGTCTTCGCAGACGCTTAACTCTCCCCGAACCAGTTGATGAGAATCCCGAAAACCT
                      ____________________________________________________________
consensus TGACGGTCTTCGCAGACGCTTAACTCTCCCCGAACCAGTTGATGAGAATCCCGAAAACCT
 
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rJMSF029B24+ TAAAGCAAGTATTCGACGACTACCAACATCTCTTGCAGAGTCAGTGGAAGCCCTGGAGAG
                      ____________________________________________________________
consensus TAAAGCAAGTATTCGACGACTACCAACATCTCTTGCAGAGTCAGTGGAAGCCCTGGAGAG
 
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rJMSF029B24+ AAACGCAACATTCAAAGGTTTGATCAACGAGAAGCTCTTGATTGCCATACAAGCAGTTCG
                      ____________________________________________________________
consensus AAACGCAACATTCAAAGGTTTGATCAACGAGAAGCTCTTGATTGCCATACAAGCAGTTCG
 
. : . : . : . : . : . :
rJMSF029B24+ AAAGGCTGAGATAAAGTATTACTCCGAAAATAATGACGCTTACAAGGAACTTATACACAA
                      ____________________________________________________________
consensus AAAGGCTGAGATAAAGTATTACTCCGAAAATAATGACGCTTACAAGGAACTTATACACAA
 
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rJMSF029B24+ ATATTAACCCTCCTTGGTATTGCGAGAATTGTTTCAAGAAATAAAAGAGTATTTAGGTAG
                      ____________________________________________________________
consensus ATATTAACCCTCCTTGGTATTGCGAGAATTGTTTCAAGAAATAAAAGAGTATTTAGGTAG
 
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rJMSF029B24+ GATGTTATGCGATACAATAGTACTACCATAACTAACTCTTGTCCAAGAAGCTACTGGGTA
                      ____________________________________________________________
consensus GATGTTATGCGATACAATAGTACTACCATAACTAACTCTTGTCCAAGAAGCTACTGGGTA
 
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rJMSF029B24+ GGACTGGACAGCTAGTACTACCAACAAAAACAGTACGTACAACGTTTTCATGATCCAATG
                      ____________________________________________________________
consensus GGACTGGACAGCTAGTACTACCAACAAAAACAGTACGTACAACGTTTTCATGATCCAATG