Contig 013997:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF049D19Sequence634013271 (5)599013997 (6)dbj|BAP19108.1|7e-102elongation factor 1 gamma-like protein, partial [Ipomoea nil]
JMSF027F23Sequence647010736 (5)ref|XP_011074970.1|9e-114PREDICTED: elongation factor 1-gamma-like [Sesamum indicum]735013997 (6)dbj|BAP19108.1|4e-101elongation factor 1 gamma-like protein, partial [Ipomoea nil]
JMSF028K23Sequence655010736 (5)ref|XP_011074970.1|3e-117PREDICTED: elongation factor 1-gamma-like [Sesamum indicum]665013997 (6)dbj|BAP19108.1|7e-101elongation factor 1 gamma-like protein, partial [Ipomoea nil]
JMSF029A08Sequence648010736 (5)ref|XP_011074970.1|2e-116PREDICTED: elongation factor 1-gamma-like [Sesamum indicum]750013997 (6)dbj|BAP19108.1|1e-101elongation factor 1 gamma-like protein, partial [Ipomoea nil]
JMSF043G11Sequence771010736 (5)ref|XP_011074970.1|2e-127PREDICTED: elongation factor 1-gamma-like [Sesamum indicum]826013997 (6)gb|KDO42760.1|2e-103hypothetical protein CISIN_1g014592mg [Citrus sinensis]
JMSF046O09Sequence683010736 (5)ref|XP_011074970.1|3e-116PREDICTED: elongation factor 1-gamma-like [Sesamum indicum]574013997 (6)dbj|BAP19108.1|5e-94elongation factor 1 gamma-like protein, partial [Ipomoea nil]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF028K23+ GGAACC
                      ____________________________________________________________
consensus GGAACC
 
. : . : . : . : . : . :
rJMSF029A08+ GAAGAAGCACCAAAGCCCAA
rJMSF043G11+ GAAGAAGCACCAAAGCCCAA
rJMFF049D19+ TAGGAGAAGAGGAAGAAGCACCAAAGCCCAA
rJMSF027F23+ AAGAAAGAAGAGCCAAAATCTGAGGTAGGAGAAGAGGAAGAAGCACCAAAGCCCAA
rJMSF028K23+ ACCAAAGAAAGAAGAGCCAAAATCTGAGGTAGGAGAAGAGGAAGAAGCACCAAAGCCCAA
                      ____________________________________________________________
consensus ACCAAAGAAAGAAGAGCCAAAATCTGAGGTAGGAGAAGAGGAAGAAGCACCAAAGCCCAA
 
. : . : . : . : . : . :
rJMSF029A08+ GCCAAAGAATCCTCTTGATCTTTTGCCTCCCAGTAAGATGATTCTAGATGAATGG-AAGA
rJMSF043G11+ GCCAAAGAATCCTCTTGATCTTTTGCCTCCCAGTAAGATGATTCTAGATGAATGG-AAGA
rJMFF049D19+ GCCAAAGAATCCTCTTGATCTTTTGCCTCCCAGTAAGATGATTCTAGATGAATGG-AAGA
rJMSF046O09+ CCTCCCAGTAAGATGATTCTAGATGAATGGAAAGA
rJMSF027F23+ GCCAAAGAATCCTCTTGATCTTTTGCCTCCCAGTAAGATGATTCTAGATGAATGG-AAGA
rJMSF028K23+ GCCAAAGAATCCTCTTGATCTTTTGCCTCCCAGTAAGATGATTCTAGATGAATGG-AAGA
                      ____________________________________________________________
consensus GCCAAAGAATCCTCTTGATCTTTTGCCTCCCAGTAAGATGATTCTAGATGAATGG-AAGA
 
. : . : . : . : . : . :
rJMSF029A08+ GGCTCTACTCAAACACTAAGACCAACTTCCAGGAATTTGCCATCAAAGGTTTTTGGGATA
rJMSF043G11+ GGCTCTACTCAAACACTAAGACCAACTTCCAGGAATTTGCCATCAAAGGTTTTTGGGATA
rJMFF049D19+ GGCTCTACTCAAACACTAAGACCAACTTCCAGGAATTTGCCATCAAAGGTTTTTGGGATA
rJMSF046O09+ GGCTCTACTCAAACACTAAGACCAACTTCCAGGAATTTGCCATCAAAGGTTTTTGGGATA
rJMSF027F23+ GGCTCTACTCAAACACTAAGACCAACTTCCAGGAATTTGCCATCAAAGGTTTTTGGGATA
rJMSF028K23+ GGCTCTACTCAAACACTAAGACCAACTTCCAGGAATTTGCCATCAAAGGTTTTTGGGATA
                      ____________________________________________________________
consensus GGCTCTACTCAAACACTAAGACCAACTTCCAGGAATTTGCCATCAAAGGTTTTTGGGATA
 
. : . : . : . : . : . :
rJMSF029A08+ TGTATGATCCCGAGGGGTACTCACTCTGGTTCTGTGATTACAAGTACAATGATGAGAACA
rJMSF043G11+ TGTATGATCCCGAGGGGTACTCACTCTGGTTCTGTGATTACAAGTACAATGATGAGAACA
rJMFF049D19+ TGTATGATCCCGAGGGGTACTCACTCTGGTTCTGTGATTACAAGTACAATGATGAGAACA
rJMSF046O09+ TGTATGATCCCGAGGGGTACTCACTCTGGTTCTGTGATTACAAGTACAATGATGAGAACA
rJMSF027F23+ TGTATGATCCCGAGGGGTACTCACTCTGGTTCTGTGATTACAAGTACAATGATGAGAACA
rJMSF028K23+ TGTATGATCCCGAGGGGTACTCACTCTGGTTCTGTGATTACAAGTACAATGATGAGAACA
                      ____________________________________________________________
consensus TGTATGATCCCGAGGGGTACTCACTCTGGTTCTGTGATTACAAGTACAATGATGAGAACA
 
. : . : . : . : . : . :
rJMSF029A08+ CTGTTTCTTTTGTAACATCGAACAAGGTGAGCGGTTTTCTTCAGAGAATGGATCTGGCAC
rJMSF043G11+ CTGTTTCTTTTGTAACATCGAACAAGGTGAGCGGTTTTCTTCAGAGAATGGATCTGGCAC
rJMFF049D19+ CTGTTTCTTTTGTAACATCGAACAAGGTGAGCGGTTTTCTTCAGAGAATGGATCTGGCAC
rJMSF046O09+ CTGTTTCTTTTGTAACATCGAACAAGGTGAGCGGTTTTCTTCAGAGAATGGATCTGGCAC
rJMSF027F23+ CTGTTTCTTTTGTAACATCGAACAAGGTGAGCGGTTTTCTTCAGAGAATGGATCTGGCAC
rJMSF028K23+ CTGTTTCTTTTGTAACATCGAACAAGGTGAGCGGTTTTCTTCAGAGAATGGATCTGGCAC
                      ____________________________________________________________
consensus CTGTTTCTTTTGTAACATCGAACAAGGTGAGCGGTTTTCTTCAGAGAATGGATCTGGCAC
 
. : . : . : . : . : . :
rJMSF029A08+ GCAAGTATGCATTTGGCAAAATGTTGGTGATTGGTTCACAGCCTCCCTTCAAGGTGAAGG
rJMSF043G11+ GCAAGTATGCATTTGGCAAAATGTTGGTGATTGGTTCACAGCCTCCCTTCAAGGTGAAGG
rJMFF049D19+ GCAAGTATGCATTTGGCAAAATGTTGGTGATTGGTTCACAGCCTCCCTTCAAGGTGAAGG
rJMSF046O09+ GCAAGTATGCATTTGGCAAAATGTTGGTGATTGGTTCACAGCCTCCCTTCAAGGTGAAGG
rJMSF027F23+ GCAAGTATGCATTTGGCAAAATGTTGGTGATTGGTTCACAGCCTCCCTTCAAGGTGAAGG
rJMSF028K23+ GCAAGTATGCATTTGGCAAAATGTTGGTGATTGGTTCACAGCCTCCCTTCAAGGTGAATG
                      ____________________________________________________________
consensus GCAAGTATGCATTTGGCAAAATGTTGGTGATTGGTTCACAGCCTCCCTTCAAGGTGAAGG
 
. : . : . : . : . : . :
rJMSF029A08+ GGTTGTGGCTCTTCCGTGGCAAAGAAATTCCAAAGTTCATTATGGATGAAGTCTATGACA
rJMSF043G11+ GGTTGTGGCTCTTCCGTGGCAAAGAAATTCCAAAGTTCATTATGGATGAAGTCTATGACA
rJMFF049D19+ GGTTGTGGCTCTTCCGTGGCAAAGAAATTCCAAAGTTCATTATGGATGAAGTCTATGACA
rJMSF046O09+ GGTTGTGGCTCTTCCGTGGCAAAGAAATTCCAAAGTTCATTATGGATGAAGTCTATGACA
rJMSF027F23+ GGTTGTGGCTCTTCCGTGGCAAAGAAATTCCAAAGTTCATTATGGATGAAGTCTATGACA
rJMSF028K23+ GGTTGTGGCTCTTCCGTGGCAAAGAAATTCCAAAGTTCATTATGGATGAAGTCTATGACA
                      ____________________________________________________________
consensus GGTTGTGGCTCTTCCGTGGCAAAGAAATTCCAAAGTTCATTATGGATGAAGTCTATGACA
 
. : . : . : . : . : . :
rJMSF029A08+ TGGAGCTGTATGAGTGGAGGGAAGCAGACATCAACGATGAAGCTCAGAAAGAGCGTGTCA
rJMSF043G11+ TGGAGCTGTATGAGTGGAGGGAAGCAGACATCAACGATGAAGCTCAGAAAGAGCGTGTCA
rJMFF049D19+ TGGAGCTGTATGAGTGGAGGGAAGCAGACATCAACGATGAAGCTCAGAAAGAGCGTGTCA
rJMSF046O09+ TGGAGCTGTATGAGTAGAGGGAAGCAGACATCAACGATGAAGCTCAGAAAGAGCGTGTCA
rJMSF027F23+ TGGAGCTGTATGAGTGGAGGGAAGCAGACATCAACGATGAAGCTCAGAAAGAGCGTGTCA
rJMSF028K23+ TGGAGCTGTATGAGTGGAGGGAAGCAGACATCAACGATGAAGCTCAGAAAGAGCGTGTCA
                      ____________________________________________________________
consensus TGGAGCTGTATGAGTGGAGGGAAGCAGACATCAACGATGAAGCTCAGAAAGAGCGTGTCA
 
. : . : . : . : . : . :
rJMSF029A08+ ACCAGATGATTGTGGACCACGAGCCTTTTGAAGGTGAGGATCTTTTGGATGCTAAGTGTT
rJMSF043G11+ ACCAGATGATTGTGGACCACGAGCCTTTTGAAGGTGAGGATCTTTTGGATGCTAAGTGTT
rJMFF049D19+ ACCAGATGATTGTGGACCACGAGCCTTTTGAAGGTGAGGATCTTTTGGATGCTAAGTGTT
rJMSF046O09+ ACCAGATGATTGTGGACCACGAGCCTTTTGAAGGTGAGGATCTTTTGGATGCTAAGTGTT
rJMSF027F23+ ACCAGATGATTGTGGACCACGAGCCTTTTGAAGGTGAGGATCTTTTGGATGCTAAGTGTT
rJMSF028K23+ ACCAGATGATTGTGGACCACGAGCCTTTTGAAGGTGAGGATCTTTTGGATGCTAAGTGTT
                      ____________________________________________________________
consensus ACCAGATGATTGTGGACCACGAGCCTTTTGAAGGTGAGGATCTTTTGGATGCTAAGTGTT
 
. : . : . : . : . : . :
rJMSF029A08+ TC
rJMSF043G11+ TC
rJMFF049D19+ TCCCCTTATCTCTAGTTTCTAGTGCTACTTAATTTTGTCCTGCAAGTTACTATTTCCTTC
rJMSF046O09+ TCCCCTTATCTCTAGTTTCTAGTGCTACTTAATTTTGTCCTGCAAGTTACTATTTCCTTC
rJMSF027F23+ TC
rJMSF028K23+ TCCCCTTATCTCTAGTTTCTAGTGCTACTTAATTTTGTCCTGCAAGTTACTATTTCCTTC
                      ____________________________________________________________
consensus TCCCCTTATCTCTAGTTTCTAGTGCTACTTAATTTTGTCCTGCAAGTTACTATTTCCTTC
 
. : . : . : . : . : . :
rJMFF049D19+ TTCATTTATAATGTGATTTCTTTCACCCC
rJMSF046O09+ TTCATTTATAATGTGATTTCTTTCACCCCAAACAATTACTGCTCTGTGATTCAAATTTA
rJMSF028K23+ TTCATTTATAATGTGATTTCTTTCACCCCAAACAATTACTGCTCTGTGATTCAAATTTAT
                      ____________________________________________________________
consensus TTCATTTATAATGTGATTTCTTTCACCCCAAACAATTACTGCTCTGTGATTCAAATTTAT