Contig 013993:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF032N02+                      CGGGAAGACTTGTATGCAGCAGTAGAAATATGACTGGAGCATTTCATG
                      ____________________________________________________________
consensus                         CGGGAAGACTTGTATGCAGCAGTAGAAATATGACTGGAGCATTTCATG
 
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rJMSF032N02+          TATACCACACTTCTTGCCTCATCCACTGGATACTTCTTTGTGAGTTGGAAATGTATGGGA
                      ____________________________________________________________
consensus             TATACCACACTTCTTGCCTCATCCACTGGATACTTCTTTGTGAGTTGGAAATGTATGGGA
 
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rJMSF032N02+          AACAATCTGATGAACCTAAAACAAAACGAAGGTCTCGGAGAAAGGCCGGGTCAAATCACA
                      ____________________________________________________________
consensus             AACAATCTGATGAACCTAAAACAAAACGAAGGTCTCGGAGAAAGGCCGGGTCAAATCACA
 
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rJMSF032N02+          AGGGAGAGAAAAAGAATGGGGCCATTAGAAAACAAATTTCTTCAATCTTCTGTCCAGAAT
rJMSF028A24+                                                          TCTGTCCAGAAT
                      ____________________________________________________________
consensus             AGGGAGAGAAAAAGAATGGGGCCATTAGAAAACAAATTTCTTCAATCTTCTGTCCAGAAT
 
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rJMSF032N02+          GCCAGGGTACAGGGATGAAGATTGATGAAGATGACTTAGAGAAACCAACTATCCCTCTGT
rJMSF028A24+          GCCAGGGTACAGGGATGAAGATTGATGAAGATGACTTAGAGAAACCAACTATCCCTCTGT
                      ____________________________________________________________
consensus             GCCAGGGTACAGGGATGAAGATTGATGAAGATGACTTAGAGAAACCAACTATCCCTCTGT
 
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rJMSF032N02+          CTGAGATATATAAATTCAAAATCAAACTTAGTGATGCACGCAAGGCGTGGATAAGAAGTC
rJMSF028A24+          CTGAGATATATAAATTCAAAATCAAACTTAGTGATGCACGCAAGGCGTGGATAAGAAGTC
                      ____________________________________________________________
consensus             CTGAGATATATAAATTCAAAATCAAACTTAGTGATGCACGCAAGGCGTGGATAAGAAGTC
 
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rJMSF032N02+          CAGAGACACTGAAGAACTGCTCAACAGGCTTCCATTTCCCTCCCTCATCTGAAGATTCGT
rJMSF028A24+          CAGAGACACTGAAGAACTGCTCAACAGGCTTCCATTTCCCTCCCTCATCTGAAGATTCGT
                      ____________________________________________________________
consensus             CAGAGACACTGAAGAACTGCTCAACAGGCTTCCATTTCCCTCCCTCATCTGAAGATTCGT
 
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rJMSF032N02+          GTCAGGAATTTGTAACACCATTGAAGCTGCTGCAGTTTTATCGGGTGAATGATTAAAGCT
rJMSF028A24+          GTCAGGAATTTGTAACACCATTGAAGCTGCTGCAGTTTTATCGGGTGAATGATTAAAGCT
                      ____________________________________________________________
consensus             GTCAGGAATTTGTAACACCATTGAAGCTGCTGCAGTTTTATCGGGTGAATGATTAAAGCT
 
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rJMSF032N02+          GAGGCCAGGCTGTCTAAGATAGATGTTTGTGTTACTGAAAGGAACCAGAATGTTGATATG
rJMSF028A24+          GAGGCCAGGCTGTCTAAGATAGATGTTTGTGTTACTGAAAGGAACCAGAATGTTGATATG
                      ____________________________________________________________
consensus             GAGGCCAGGCTGTCTAAGATAGATGTTTGTGTTACTGAAAGGAACCAGAATGTTGATATG
 
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rJMSF032N02+          TGGAACGTTCAAGTAAAATTGCTGTAAATACTCAGTATTTCAAAGAATTGATGCGTAGAA
rJMSF028A24+          TGGAACGTTCAAGTAAAATTGCTGTAAATACTCAGTATTTCAAAGAATTGATGCGTAGAA
                      ____________________________________________________________
consensus             TGGAACGTTCAAGTAAAATTGCTGTAAATACTCAGTATTTCAAAGAATTGATGCGTAGAA
 
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rJMSF032N02+          ACCATTTAAAGCATGTAGTAGTGACACATTGACAAGAAGCTTGCTTTTGTACATTTCTGG
rJMSF028A24+          ACCATTTAAAGCATGTAGTAGTGACACATTGACAAGAAGCTTGCTTTTGTACATTTCTGG
                      ____________________________________________________________
consensus             ACCATTTAAAGCATGTAGTAGTGACACATTGACAAGAAGCTTGCTTTTGTACATTTCTGG
 
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rJMSF032N02+          CGTT                                                        
rJMSF028A24+          CGTTTCTTGTTTTAAGAGAGAAGGATTAATTAGGAGTTGGTTGGTCTATGCTGCAAAACT
                      ____________________________________________________________
consensus             CGTTTCTTGTTTTAAGAGAGAAGGATTAATTAGGAGTTGGTTGGTCTATGCTGCAAAACT
 
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rJMSF028A24+          TTGTTATTATTATTATTATTTTTGGTTAAATATATAGATATCTATGTATGCCTGATTTGG
                      ____________________________________________________________
consensus             TTGTTATTATTATTATTATTTTTGGTTAAATATATAGATATCTATGTATGCCTGATTTGG
 
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rJMSF028A24+          ACATGTTTCTAAGTACCCATCCAATTGCAGGACAGTATCTGCTATCTGACCTGAAATGTA
                      ____________________________________________________________
consensus             ACATGTTTCTAAGTACCCATCCAATTGCAGGACAGTATCTGCTATCTGACCTGAAATGTA
 
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rJMSF028A24+          GAGAAATTTTTACTACTAGCATGCGTAGCAATTTGATAATGTTTACATGCTCTGTAATGA
                      ____________________________________________________________
consensus             GAGAAATTTTTACTACTAGCATGCGTAGCAATTTGATAATGTTTACATGCTCTGTAATGA