Contig 013991:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF027O24Sequence626013991 (4)ref|XP_006361860.1|251PREDICTED: uncharacterized protein LOC102583028 [Solanum tuberosum]724013991 (4)ref|XP_006361860.1|270PREDICTED: uncharacterized protein LOC102583028 [Solanum tuberosum]
JMSF035P17Sequence644013991 (4)ref|XP_006361860.1|262PREDICTED: uncharacterized protein LOC102583028 [Solanum tuberosum]724013991 (4)ref|XP_006361860.1|272PREDICTED: uncharacterized protein LOC102583028 [Solanum tuberosum]

Alignment

This contig is upended


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JMSF027O24-                                       GGTACGTTGTGAAGGCATATATTATGGCGGAA
JMSF035P17-                                               GTGAAGGCATATATTATGGCGGAA
rJMSF035P17+                                              GTGAAGGCATATATTATGGCGGAA
                      ____________________________________________________________
consensus                                         GGTACGTTGTGAAGGCATATATTATGGCGGAA
 
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JMSF027O24-           GGGGAAAGAAGCGCAAACGAGCCAGTACCCGACCCGAATCCGTGCCCTATCTGCCTCGGA
JMSF035P17-           GGGGAAAGAAGCGCAAACGAGCCAGTACCCGACCCGAATCCGTGCCCTATCTGCCTCGGA
rJMSF035P17+          GGGGAAAGAAGCGCAAACGAGCCAGTACCCGACCCGAATCCGTGCCCTATCTGCCTCGGA
rJMSF027O24+                                                                  CGGA
                      ____________________________________________________________
consensus             GGGGAAAGAAGCGCAAACGAGCCAGTACCCGACCCGAATCCGTGCCCTATCTGCCTCGGA
 
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JMSF027O24-           CCCGTGACTCAAGATTCATACTTGGAGCAATGCTTTCATAGAAAGCTTTTCAATCGTACA
JMSF035P17-           CCCGTGACTCAAGATTCATACTTGGAGCAATGCTTTCATAGAAAGCTTTTCAATCGTACA
rJMSF035P17+          CCCGTGACTCAAGATTCATACTTGGAGCAATGCTTTCATAGAAAGCTTTTCAATCGTACA
rJMSF027O24+          CCCGNGACTCAAGATTCATACTGGGAGCAATGCTTTCATAGAAAGCTTTTCCATCGTACA
                      ____________________________________________________________
consensus             CCCGTGACTCAAGATTCATACTTGGAGCAATGCTTTCATAGAAAGCTTTTCAATCGTACA
 
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JMSF027O24-           TGGATATGATGGAAGTTCTTTTCAAAGACATTATGTTGGTCAGGATCTGGGAAGTAGTGC
JMSF035P17-           TGGATATGATGGAAGTTCTTTTCAAAGACATTATGTTGGTCAGGATCTGGGAAGTAGTGC
rJMSF035P17+          TGGATATGATGGAAGTTCTTTTCAAAGACATTATGTTGGTCAGGATCTGGGAAGTAGTGC
rJMSF027O24+          TGGATATGATGGAAGTTCTTTTCAAAGACATTATGTTGGTCAGGATCTGGGAAGTAGTGC
                      ____________________________________________________________
consensus             TGGATATGATGGAAGTTCTTTTCAAAGACATTATGTTGGTCAGGATCTGGGAAGTAGTGC
 
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JMSF027O24-           ATTTTTCACGAAACTTCACAAGTATAGATTACAGTGCTATTACACCGAAGCAGGTACTCT
JMSF035P17-           ATTTTTCACGAAACTTCACAAGTATAGATTACAGTGCTATTACACCGAAGCAGGTACTCT
rJMSF035P17+          ATTTTTCACGAAACTTCACAAGTATAGATTACAGTGCTATTACACCGAAGCAGGTACTCT
rJMSF027O24+          ATTTTTCACGAAACTTCACAAGTATAGATTACAGTGCTATTACACCGAAGCAGGTACTCT
                      ____________________________________________________________
consensus             ATTTTTCACGAAACTTCACAAGTATAGATTACAGTGCTATTACACCGAAGCAGGTACTCT
 
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JMSF027O24-           GGCTGACAAATTGAAGGTAATGCGATACTGGAAGTTGCACAAGTATCGTCAGCCTGCTCA
JMSF035P17-           GGCTGACAAATTGAAGGTAATGCGATACTGGAAGTTGCACAAGTATCGTCAGCCTGCTCA
rJMSF035P17+          GGCTGACAAATTGAAGGTAATGCGATACTGGAAGTTGCACAAGTATCGTCAGCCTGCTCA
rJMSF027O24+          GGCTGACAAATTGAAGGTAATGCGATACTGGAAGTTGCACAAGTATCGTCAGCCTGCTCA
                      ____________________________________________________________
consensus             GGCTGACAAATTGAAGGTAATGCGATACTGGAAGTTGCACAAGTATCGTCAGCCTGCTCA
 
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JMSF027O24-           TCAACTTTACAGTTGGCTGACAAGGGAAATCCAAGCATTAACACAGGAAGAAGATGTTGA
JMSF035P17-           TCAACTTTACAGTTGGCTGACAAGGGAAATCCAAGCATTAACACAGGAAGAAGATGTTGA
rJMSF035P17+          TCAACTTTACAGTTGGCTGACAAGGGAAATCCAAGCATTAACACAGGAAGAAGATGTTGA
rJMSF027O24+          TCAACTTTACAGTTGGCTGACAAGGGAAATCCAAGCATTAACACAGGAAGAAGATGTTGA
                      ____________________________________________________________
consensus             TCAACTTTACAGTTGGCTGACAAGGGAAATCCAAGCATTAACACAGGAAGAAGATGTTGA
 
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JMSF027O24-           TATCATTGTGCATCATGTATTCGGAGTAATTGAATCCTTCAAGAGAAATGAGCAAAGCCA
JMSF035P17-           TATCATTGTGCATCATGTATTCGGAGTAATTGAATCCTTCAAGAGAAATGAGCAAAGCCA
rJMSF035P17+          TATCATTGTGCATCATGTATTCGGAGTAATTGAATCCTTCAAGAGAAATGAGCAAAGCCA
rJMSF027O24+          TATCATTGTGCATCATGTATTCGGAGTAATTGAATCCTTCAAGAGAAATGAGCAAAGCCA
                      ____________________________________________________________
consensus             TATCATTGTGCATCATGTATTCGGAGTAATTGAATCCTTCAAGAGAAATGAGCAAAGCCA
 
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JMSF027O24-           TATACAAATGACTCCAGAGGCAAATCAAGAGGAATTCCGAGTCTTGGTCTCTCAAGCAGC
JMSF035P17-           TATACAAGTGACTCCAGAGGCAAATCAAGAGGAATTCCGAGTCTTGGTCTCTCAAGCAGC
rJMSF035P17+          TATACAAGTGACTCCAGAGGCAAATCAAGAGGAATTCCGAGTCTTGGTCTCTCAAGCAGC
rJMSF027O24+          TATACAAATGACTCCAGAGGCAAATCAAGAGGAATTCCGAGTCTTGGTCTCTCAAGCAGC
                      ____________________________________________________________
consensus             TATACAAGTGACTCCAGAGGCAAATCAAGAGGAATTCCGAGTCTTGGTCTCTCAAGCAGC
 
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JMSF027O24-           AAGGCCTTTTTTGACAGGTAGAACGGATCGTTTTGTGAATGAGGTACAACTGTTTTTAGC
JMSF035P17-           AAGGCCTTTTTTGACAGGTAGAACGGATCGTTTTGTGAATGAGGTACAACTGTTTTTAGC
rJMSF035P17+          AAGGCCTTTTTTGACAGGTAGAACGGATCGTTTTGTGAATGAGGTACAACTGTTTTTAGC
rJMSF027O24+          AAGGCCTTTTTTGACAGGTAGAACGGATCGTTTTGTGAATGAGGTACAACTGTTTTTAGC
                      ____________________________________________________________
consensus             AAGGCCTTTTTTGACAGGTAGAACGGATCGTTTTGTGAATGAGGTACAACTGTTTTTAGC
 
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JMSF027O24-           TTCGGAGTTGACAATGGATGCCTTTGACAAAGTTTATGTCCAGCATCTAGGCTG      
JMSF035P17-           TTCGGAGTTGACAATGGATGCCTTTGACAAAGTTTATGTCCAGCATCTAGGCTGGAAATT
rJMSF035P17+          TTCGGAGTTGACAATGGATGCCTTTGACAAAGTTTATGTCCAGCATCTAGGCTGGAAATT
rJMSF027O24+          TTCGGAGTTGACAATGGATGCCTTTGACAAAGTTTATGTCCAGCATCTAGGCTGGAAATT
                      ____________________________________________________________
consensus             TTCGGAGTTGACAATGGATGCCTTTGACAAAGTTTATGTCCAGCATCTAGGCTGGAAATT
 
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JMSF035P17-           CCCTGAAATAACTAAG                                            
rJMSF035P17+          CCCTGAAATAACTAAGGATGAGGAGGAAAGAGAAGTTGAAAGTTACTCAACTCCATACTT
rJMSF027O24+          CCCTGAAATAACTAAGGATGAGGAGGAAAGAGAAGTTGAAAGTTACTCAACTCCATACTT
                      ____________________________________________________________
consensus             CCCTGAAATAACTAAGGATGAGGAGGAAAGAGAAGTTGAAAGTTACTCAACTCCATACTT
 
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rJMSF035P17+          GTATTTCTTTGATGAAGACTGATGAAAATGAGTGAATTTT                    
rJMSF027O24+          GTATTTCTTTGATGAAGACTGATGAAAATGAGTGAATTTTTTAAAATGAATTGTAAGGTT
                      ____________________________________________________________
consensus             GTATTTCTTTGATGAAGACTGATGAAAATGAGTGAATTTTTTAAAATGAATTGTAAGGTT
 
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rJMSF027O24+          CACTTGCCTTGCGAACTAGCCATCAAACTCAGATCCTCTCAATTTCATATTGTTCTCGTT
                      ____________________________________________________________
consensus             CACTTGCCTTGCGAACTAGCCATCAAACTCAGATCCTCTCAATTTCATATTGTTCTCGTT