Contig 013983:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF023L23Sequence621013983 (4)ref|XP_006350516.1|1e-93PREDICTED: thylakoid lumenal 17.4 kDa protein, chloroplastic-like [Solanum tube589007207 (19)ref|XP_009605928.1|4e-57PREDICTED: mitochondrial amidoxime reducing component 2-like isoform X2 [Nicoti
JMSF026F16Sequence638013983 (4)ref|XP_006350516.1|4e-95PREDICTED: thylakoid lumenal 17.4 kDa protein, chloroplastic-like [Solanum tube808013983 (4)ref|XP_011084531.1|1e-111PREDICTED: thylakoid lumenal 17.4 kDa protein, chloroplastic [Sesamum indicum]
JMSF043K15Sequence678013983 (4)ref|XP_006350516.1|5e-91PREDICTED: thylakoid lumenal 17.4 kDa protein, chloroplastic-like [Solanum tube

Alignment

This contig is upended


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JMSF023L23-                                       AGAAAATGGCGTTTCTCTCTCCTTCCCCGACG
JMSF026F16-                               GATGGCCAAGAAAATGGCGTTTCTCTCTCCTTCCCCGACG
                      ____________________________________________________________
consensus                                 GATGGCCAAGAAAATGGCGTTTCTCTCTCCTTCCCCGACG
 
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JMSF023L23-           CANAAACCACAGTCTCAGTATCTTCGCAACTACCCAAAGAAATTTTCTCACTATACTCCT
JMSF026F16-           CAGAAACCACAGTCTCAGTATCTTCGCAACTACCCAAAGAAATTTTCTCACTATACTCCT
                      ____________________________________________________________
consensus             CAGAAACCACAGTCTCAGTATCTTCGCAACTACCCAAAGAAATTTTCTCACTATACTCCT
 
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JMSF023L23-           CTGCTACACCGGCCGCCGCCGCAGATCANATGTTCAGCTTTCAGTGACAGCTCGAATGCC
JMSF026F16-           CTGCTACACCGGCCGCCGCCGCAGATCAGATGTTCAGCTTTCAGTGACAGCTCGAATGCC
rJMSF026F16+                                          TTCAGCTTTCAGTGACAGCTCGNATGCC
                      ____________________________________________________________
consensus             CTGCTACACCGGCCGCCGCCGCAGATCAGATGTTCAGCTTTCAGTGACAGCTCGAATGCC
 
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JMSF023L23-           AAGGAAAGCACATCTGAATTCAAGGAAATAAGAAATGTAGCTTGTGGGATTCTTGCTGCT
JMSF026F16-           AAGGAAAGCACATCTGAATTCAAGGAAATAAGAAATGTAGCTTGTGGGATTCTTGCTGCT
rJMSF026F16+          AAGGAAAGCACATCTGAATTCAAGGAAATAAGAAATGTAGCTTGTGGGATTCTTGCTGCT
                      ____________________________________________________________
consensus             AAGGAAAGCACATCTGAATTCAAGGAAATAAGAAATGTAGCTTGTGGGATTCTTGCTGCT
 
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JMSF023L23-           TGGGCAATCANTGCTGTTTCACCTGTTATTGCTGCCAGTCAAAGGTTGCCTCCTTTATCG
JMSF026F16-           TGGGCAATCAGTGCTGTTTCACCTGTTATTGCTGCCAGTCAAAGGTTGCCTCCTTTATCG
rJMSF043K15+                                            CCAGTCAAAGGTTGCCTCCTTTATCG
rJMSF026F16+          TGGGCAATCAGTGCTGTTTCACCTGTTATTGCTGCCAGTCAAAGGTTGCCTCCTTTATCG
                      ____________________________________________________________
consensus             TGGGCAATCAGTGCTGTTTCACCTGTTATTGCTGCCAGTCAAAGGTTGCCTCCTTTATCG
 
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JMSF023L23-           ACAGAGCCAAACAGGTGTGAGCGTGCTTTTATTGGCAACACGATAGGTCAAGCTAACGGT
JMSF026F16-           ACAGAGCCAAACAGGTGTGAGCGTGCTTTTATTGGCAACACGATAGGTCAAGCTAACGGT
rJMSF043K15+          ACAGAGCCAAACAGGTGTGAGCGTGCTNTTATTGGCAACACGATAGGTCAAGCTAACGGT
rJMSF026F16+          ACAGAGCCAAACAGGTGTGAGCGTGCTTTTATTGGCAACACGATAGGTCAAGCTAACGGT
                      ____________________________________________________________
consensus             ACAGAGCCAAACAGGTGTGAGCGTGCTTTTATTGGCAACACGATAGGTCAAGCTAACGGT
 
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JMSF023L23-           GTTTATGACAAACCACTCGATCTGCGCTTTTGTGATTACACGAACGAGAAAACCAACCTC
JMSF026F16-           GTTTATGACAAACCACTCGATCTGCGCTTTTGTGATTACACGAACGAGAAAACCAACCTC
rJMSF043K15+          GNTTATGACAAACCACTCGATCTGCGCTTTTGTGATTACACGAACGAGAAAACCAACCTC
rJMSF026F16+          GTTTATGACAAACCACTCGATCTGCGCTTTTGTGATTACACGAACGAGAAAACCAACCTC
                      ____________________________________________________________
consensus             GTTTATGACAAACCACTCGATCTGCGCTTTTGTGATTACACGAACGAGAAAACCAACCTC
 
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JMSF023L23-           AAGGGGAAGTCTCTCTCAGCAGCACTTATGTCAGACGCCAAGTTTGATGGTGCAGACATG
JMSF026F16-           AAGGGGAAGTCTCTCTCAGCAGCACTTATGTCAGACGCCAAGTTTGATGGTGCAGACATG
rJMSF043K15+          AAGGGGAAGTCTCTCTCAGCAGCACTTATGTCAGACGCCAAGTTTGATGGTGCAGACATG
rJMSF026F16+          AAGGGGAAGTCTCTCTCAGCAGCACTTATGTCAGACGCCAAGTTTGATGGTGCAGACATG
                      ____________________________________________________________
consensus             AAGGGGAAGTCTCTCTCAGCAGCACTTATGTCAGACGCCAAGTTTGATGGTGCAGACATG
 
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JMSF023L23-           TCTGAAGTTATAATGTCAAAAGCTTATGCAGTTGGAGCTAGCTTTAAGGGCACAGACTTT
JMSF026F16-           TCTGAAGTTATAATGTCAAAAGCTTATGCAGTTGGAGCTAGCTTTAAGGGCACAGACTTT
rJMSF043K15+          TCTGAAGTTATAATGTCAAAAGCTTATGCAGTTGGAGCTAGCNTTAAGGGCACAGACTTT
rJMSF026F16+          TCTGAAGTTATAATGTCAAAAGCTTATGCAGTTGGAGCTAGCTTTAAGGGCACAGACTTT
                      ____________________________________________________________
consensus             TCTGAAGTTATAATGTCAAAAGCTTATGCAGTTGGAGCTAGCTTTAAGGGCACAGACTTT
 
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JMSF023L23-           TCCAATGCTGTTCTTGATCGCGTTAACTTTGAGAAGGCCGACCTGCAAGGAGCTTCGTTT
JMSF026F16-           TCCAATGCTGTTCTTGATCGCGTTAACTTTGAGAAGGCCGACCTGCAAGGAGCTTCGTTT
rJMSF043K15+          TCCAATGCTGNTCTTGATCGCGTTAACTTTGNGAAGGCCGACCTGCAAGGAGCTTCGTTT
rJMSF026F16+          TCCAATGCTGTTCTTGATCGCGTTAACTTTGAGAAGGCCGACCTGCAAGGAGCTTCGTTT
                      ____________________________________________________________
consensus             TCCAATGCTGTTCTTGATCGCGTTAACTTTGAGAAGGCCGACCTGCAAGGAGCTTCGTTT
 
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JMSF023L23-           AAGAACACAGTGCTATCTGGATCCACTTTCAACGATGCTCATCTTGA             
JMSF026F16-           AAGAACACAGTGCTATCTGGATCCACTTTCAACGATGCTCATCTTGAAAACGTAGTCT  
rJMSF043K15+          AAGAACACAGTGCTATCTGGATCCACTTTCAACGATGCTCATCTTGAAAACGTAGTCTTT
rJMSF026F16+          AAGAACACAGTGCTATCTGGATCCACTTTCAACGATGCTCATCTTGAAAACGTAGTCTTT
                      ____________________________________________________________
consensus             AAGAACACAGTGCTATCTGGATCCACTTTCAACGATGCTCATCTTGAAAACGTAGTCTTT
 
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rJMSF043K15+          GAGGACACCATCATCGGCTACANTGATCTTCAGAAGCTCCGCACAAACAAAACANTCGAC
rJMSF026F16+          GAGGACACCATCATCGGCTACATTGATCTTCAGAAGCTCTGCACAAACAAAACAATCGAC
                      ____________________________________________________________
consensus             GAGGACACCATCATCGGCTACATTGATCTTCAGAAGCTCTGCACAAACAAAACAATCGAC
 
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rJMSF043K15+          GAAGAAGGAAGGGCTAACTTNGGANGTCGATAGCCTCGTGTNATGACCTCAATGGGAGGG
rJMSF026F16+          GAAGAAGGAAGGGCTAACTTAGGATGTCGATAGCCTCGTGTTATGACCTCAATGGGAGGG
                      ____________________________________________________________
consensus             GAAGAAGGAAGGGCTAACTTAGGATGTCGATAGCCTCGTGTTATGACCTCAATGGGAGGG
 
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rJMSF043K15+          AGAGACATATATATCATCTGAAGTTTTGCTACAGTGAGTATAANTAAATGATGAATGTGA
rJMSF026F16+          AGAGACATATATATCATCTGAAGTTTTGCTACAGTGAGTATAACTAAATGATGAATGTGA
                      ____________________________________________________________
consensus             AGAGACATATATATCATCTGAAGTTTTGCTACAGTGAGTATAACTAAATGATGAATGTGA
 
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rJMSF043K15+          AGGAAAATTNGAATTGAATTGAATTGCTTCAGTTCTTTGTGTCTACTGTAAAACCTTGCT
rJMSF026F16+          AGGAAAATTTGAATTGAATTGAATTGCTTCAGTTCTTTGTGTTTACTGTAAAACCTTGCT
                      ____________________________________________________________
consensus             AGGAAAATTTGAATTGAATTGAATTGCTTCAGTTCTTTGTGTTTACTGTAAAACCTTGCT
 
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rJMSF043K15+          TCAGATTCAATTTGTTCTTCTATATG                                  
rJMSF026F16+          TCAGATTCAATTTGTTCTTCTATATGTAATTCATTCTATACATTTGCTCCCCTGAGGAGA
                      ____________________________________________________________
consensus             TCAGATTCAATTTGTTCTTCTATATGTAATTCATTCTATACATTTGCTCCCCTGAGGAGA