| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF007M18 | Sequence | 278 | 002099 (5) | 731 | 013976 (5) | gb|KHG25437.1| | 1e-144 | hypothetical protein F383_06753 [Gossypium arboreum] | |||
| JMSF011I16 | Sequence | 281 | 002099 (5) | 751 | 013976 (5) | gb|ADI87417.1| | 6e-140 | fructokinase-like protein 1 [Gossypium hirsutum] | |||
| JMSF014D08 | Sequence | 484 | 002099 (5) | ref|XP_009629251.1| | 4e-10 | PREDICTED: fructokinase-1 [Nicotiana tomentosiformis] | 752 | 013976 (5) | gb|ADI87417.1| | 1e-153 | fructokinase-like protein 1 [Gossypium hirsutum] |
| JMSF025I10 | Sequence | 657 | 002099 (5) | emb|CDP06530.1| | 2e-50 | unnamed protein product [Coffea canephora] | 745 | 013976 (5) | gb|ADI87421.1| | 4e-120 | fructokinase-like protein 1 [Nicotiana tabacum] |
| JMSF029A06 | Sequence | 641 | 002099 (5) | ref|XP_009629251.1| | 1e-53 | PREDICTED: fructokinase-1 [Nicotiana tomentosiformis] | 703 | 013976 (5) | gb|KHG25437.1| | 6e-109 | hypothetical protein F383_06753 [Gossypium arboreum] |
This contig is upended
. : . : . : . : . : . :
rJMSF007M18+ TGCTGTGCTCAAAGAGGCTAGAATTTTTCCATT
rJMSF029A06+ TGCTGTGCTCAAAGAGGCTAGAA-TTTTCCATT
rJMSF014D08+ TCTGAATTGAATCTTGCTGTGCTCAAAGAGGCTAGAA-TTTTCCATT
____________________________________________________________
consensus TCTGAATTGAATCTTGCTGTGCTCAAAGAGGCTAGAA-TTTTCCATT
. : . : . : . : . : . :
rJMSF007M18+ TTAATTCAGAAGTCCTAACATCTCCCACTATGCATTCCACCCTTTTCAAAGCAATTTCAT
rJMSF029A06+ TTAATTCAGAAGTCCTAACATCTCCCACTATGCATTCCACCCTTTTCAAAGCAATTTCAT
rJMSF014D08+ TTAATTCAGAAGTCCTAACATCTCCCACTATGCATTCCACCCTTTTCAAAGCAATTTCAT
rJMSF011I16+ TCAGAAGTCCTAACATCTCCCACTATGCATTCCACCCTTTTCAAAGCAATTTCAT
____________________________________________________________
consensus TTAATTCAGAAGTCCTAACATCTCCCACTATGCATTCCACCCTTTTCAAAGCAATTTCAT
. : . : . : . : . : . :
rJMSF007M18+ GGTCAAAAAAGTTTGGTGGCCTTATATTCTTTGATTTGAATCTGCCACTGCCTTTGTGGA
rJMSF029A06+ GGTCAAAAAAGTTTGGTGGCCTTATATTCTTTGATTTGAATCTGCCACTGCCTTTGTGGA
rJMSF014D08+ GGTCAAAAAAGTTTGGTGGCCTTATATTCTTTGATTTGAATCTGCCACTGCCTTTGTGGA
rJMSF011I16+ GGTCAAAAAAGTTTGGTGGCCTTATATTCTTTGATTTGAATCTGCCACTGCCTTTGTGGA
rJMSF025I10+ TTGAATCTGCCACTGCCTTTGTGGA
____________________________________________________________
consensus GGTCAAAAAAGTTTGGTGGCCTTATATTCTTTGATTTGAATCTGCCACTGCCTTTGTGGA
. : . : . : . : . : . :
rJMSF007M18+ AATCGCGGGATGAGACTTGGGAAGTGATCAAGGGAGCCTGGGAGCAAGCAGATATCATTG
rJMSF029A06+ AATCGCGGGATGAGACTTGGGAAGTGATCAAGGGAGCCTGGGAGCAAGCAGATATCATTG
rJMSF014D08+ AATCGCGGGATGAGACTTGGGAAGTGATCAAGGGAGCCTGGGAGCAAGCAGATATCATTG
rJMSF011I16+ AATCGCGGGATGAGACTTGGGAAGTGATCAAGGGAGCCTGGGAGCAAGCAGATATCATTG
rJMSF025I10+ AATCGCGGGATGAGACTTGGGAAGTGATCAAGGGAGCCTGGGAGCAAGCAGATATCATTG
____________________________________________________________
consensus AATCGCGGGATGAGACTTGGGAAGTGATCAAGGGAGCCTGGGAGCAAGCAGATATCATTG
. : . : . : . : . : . :
rJMSF007M18+ AAGTTTCAAGGAGCGAGCTAGAATTTCTTCTTGACGAAGATCATTATGAACATAAAAGAA
rJMSF029A06+ AAGTTTCAAGGAGCGAGCTAGAATTTCTTCTTGACGAAGATCATTATGAACATAAAAGAA
rJMSF014D08+ AAGTTTCAAGGAGCGAGCTAGAATTTCTTCTTGACGAAGATCATTATGAACATAAAAGAA
rJMSF011I16+ AAGTTTCAAGGAGCGAGCTAGAATTTCTTCTTGACGAAGATCATTATGAACATAAAAGAA
rJMSF025I10+ AAGTTTCAAGGAGCGAGCTAGAATTTCTTCTTGACGAAGATCATTATGAACATAAAAGAA
____________________________________________________________
consensus AAGTTTCAAGGAGCGAGCTAGAATTTCTTCTTGACGAAGATCATTATGAACATAAAAGAA
. : . : . : . : . : . :
rJMSF007M18+ ACTATAAACCTCAATACTTTGCTGAGGATTTTCAGCAAACCAGGAAGATAAGAAACTATT
rJMSF029A06+ ACTATAAACCTCAATACTTTGCTGAGGATTTTCAGCAAACCAGGAAGATAAGAAACTATT
rJMSF014D08+ ACTATAAACCTCAATACTTTGCTGAGGATTTTCAGCAAACCAGGAAGATAAGAAACTATT
rJMSF011I16+ ACTATAAACCTCAATACTTTGCTGAGGATTTTCAGCAAACCAGGAAGATAAGAAACTATT
rJMSF025I10+ ACTATAAACCTCAATACTTTGCTGAGGATTTTCAGCAAACCAGGAAGATAAGAAACTATT
____________________________________________________________
consensus ACTATAAACCTCAATACTTTGCTGAGGATTTTCAGCAAACCAGGAAGATAAGAAACTATT
. : . : . : . : . : . :
rJMSF007M18+ ACCACTATAGCCGGGAAGAAGTAGCTCCATTATGGCATGATCGTTTGAAGTTTTTGTTCG
rJMSF029A06+ ACCAC--TAGCCGGGAAGAAGTAGCTCCATTATGGCATGATCGTTTGAAGTTTTTGTTCG
rJMSF014D08+ ACCACTATAGCCGGGAAGAAGTAGCTCCATTATGGCATGATCGTTTGAAGTTTTTGTTCG
rJMSF011I16+ ACCACTATAGCCGGGAAGAAGTAGCTCCATTATGGCATGATCGTTTGAAGTTTTTGTTCG
rJMSF025I10+ ACCACTATAGCCGGGAAGAAGTAGCTCCATTATGGCATGATCGTTTGAAGTTTTTGTTCG
____________________________________________________________
consensus ACCACTATAGCCGGGAAGAAGTAGCTCCATTATGGCATGATCGTTTGAAGTTTTTGTTCG
. : . : . : . : . : . :
rJMSF007M18+ TGACGGATGGAACCCTTCGGCTTCATTATTACACCCCGTCTTTTGAGGGGGTTGTAGTCG
rJMSF029A06+ TGACGGATGGAACCCTTCGGCTTCATTATTACACCCCGTCTTTTGAGGGGGTTGTAGTCG
rJMSF014D08+ TGACGGATGGAACCCTTCGGCTTCATTATTACACCCCGTCTTTTGAGGGGGTTGTAGTCG
rJMSF011I16+ TGACGGATGGAACCCTTCGGCTTCATTATTACACCCCGTCTTTTGAGGGGGTTGTAGTCG
rJMSF025I10+ TGACGGATGGAACCCTTCGGCTTCATTATTACACCCCGTCTTTTGAGGGGGTTGTAGTCG
____________________________________________________________
consensus TGACGGATGGAACCCTTCGGCTTCATTATTACACCCCGTCTTTTGAGGGGGTTGTAGTCG
. : . : . : . : . : . :
rJMSF007M18+ GGACTGAAGATGTACTTATAACGCCATTCACGTGTGACAGAACCGGTTCTGGGGATGCTG
rJMSF029A06+ GGACTGAAGATGTACTTATAACGCCATTCACGTGTGACAGAACCGGTTCTGGGGATGCTG
rJMSF014D08+ GGACTGAAGATGTACTTATAACGCCATTCACGTGTGACAGAACCGGTTCTGGGGATGCTG
rJMSF011I16+ GGACTGAAGATGTACTTATAACGCCATTCACGTGTGACAGAACCGGTTCTGGGGATGCTG
rJMSF025I10+ GGACTGAAGATGTACTTATAACGCCATTCACGTGTGACAGAACCGGTTCTGGGGATGCTG
____________________________________________________________
consensus GGACTGAAGATGTACTTATAACGCCATTCACGTGTGACAGAACCGGTTCTGGGGATGCTG
. : . : . : . : . : . :
rJMSF007M18+ TTGTTGCGGGAATCATGAGAAAACTCACGACTCAGCCAGAGATGTTCGAGAACCAAGATG
rJMSF029A06+ TTGTTGCGGGAATCATGAGAAAACTCACGACTCAGCCAGAGATGTTCGAGAACCAAGATG
rJMSF014D08+ TTGTTGCGGGAATCATGAGAAAACTCACGACTCAGCCAGAGATGTTCGAGAACCAAGATG
rJMSF011I16+ TTGTTGCGGGAATCATGAGAAAACTCACGACTCAGCCAGAGATGTTCGAGAACCAAGATG
rJMSF025I10+ TTGTTGCGGGAATCATGAGAAAACTCACGACTCAGCCAGAGATGTTCGAGAACCAAGATG
____________________________________________________________
consensus TTGTTGCGGGAATCATGAGAAAACTCACGACTCAGCCAGAGATGTTCGAGAACCAAGATG
. : . : . : . : . : . :
rJMSF007M18+ TTTTGGAGAGGCAACTTCGATTTGCTATTTCTGCAGGGATAATATCCCAGTGGACGATTG
rJMSF029A06+ TTTTGGAGAGGCAACTTCGATTTGCTATTTCTGCAGGGATAATATCCCAGTGGACGATTG
rJMSF014D08+ TTTTGGAGAGGCAACTTCGATTTGCTATTTCTGCAGGGATAATATCCCAGTGGACGATTG
rJMSF011I16+ TTTTGGAGAGGCAACTTCGATTTGCTATTTCTGCAGGGATAATATCCCAGTGGACGATTG
rJMSF025I10+ TTTTGGAGAGGCAACTTCGATTTGCTATTTCTGCAGGGATAATATCCCAGTGGACGATTG
____________________________________________________________
consensus TTTTGGAGAGGCAACTTCGATTTGCTATTTCTGCAGGGATAATATCCCAGTGGACGATTG
. : . : . : . : . : . :
rJMSF007M18+ GCGCTGTAAGGGGTTTTCCCACTGAAAGTGCCACACAGAACCTGAAAGAACAAGTCTATG
rJMSF029A06+ GCGCTGTAAGGGGTTTTCCCACTGAAAGTGCCACACAGAACCTGAAAGAAC
rJMSF014D08+ GCGCTGTAAGGGGTTTTCCCACTGAAAGTGCCACACAGAACCTGAAAGAACAAGTCTATG
rJMSF011I16+ GCGCTGTAAGGGGTTTTCCCACTGAAAGTGCCACACAGAACCTGAAAGAACAAGTCTATG
rJMSF025I10+ GCGCTGTAAGGGGTTTTCCCACTGAAAGTGCCACACAGAACCTGAAAGAACAAGTCTATG
____________________________________________________________
consensus GCGCTGTAAGGGGTTTTCCCACTGAAAGTGCCACACAGAACCTGAAAGAACAAGTCTATG
. : . : . : . : . : . :
rJMSF007M18+ TGCCATCAATGTGGTAAAATTTCAGTTACAT
rJMSF014D08+ TGCCATCAATGTGGTAAAATTTCAGTTACAT
rJMSF011I16+ TGCCATCAATGTGGTAAAATTTCAGTTACATTGAATAGAAATTGTTGTTTGGTAGCCTTA
rJMSF025I10+ TGCCATCAATGTGGTAAAATTTCAGTTACATTGAATAGAAATTGTTGTTTGGTAGCCTTA
____________________________________________________________
consensus TGCCATCAATGTGGTAAAATTTCAGTTACATTGAATAGAAATTGTTGTTTGGTAGCCTTA
. : . : . : . : . : . :
rJMSF011I16+ TTATTTATGAATCCTTCCTCCAAGGTGCTTCTTCTT
rJMSF025I10+ TTATTTATGAATCCTTCCTCCAAGGTGCTTCTTCTTTACTTTAATCACAACTAAAGAAAA
____________________________________________________________
consensus TTATTTATGAATCCTTCCTCCAAGGTGCTTCTTCTTTACTTTAATCACAACTAAAGAAAA
. : . : . : . : . : . :
rJMSF025I10+ TAGATGACAAAAAGATGCTGCAATAGTATAATTATTTTTGTTAAGATTTTCAGCAATTTT
____________________________________________________________
consensus TAGATGACAAAAAGATGCTGCAATAGTATAATTATTTTTGTTAAGATTTTCAGCAATTTT