Contig 013973:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN016F05Sequence577013973 (3)
JMSF001P15Sequence149013973 (3)438019207
JMSF024N12Sequence155017837623013973 (3)

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN016F05+ AAACACTAAAAACCTCTTATCTTGAATTCAATTAATTGTAAGTTGGTCAGGTTGTGGAT
                      ____________________________________________________________
consensus AAACACTAAAAACCTCTTATCTTGAATTCAATTAATTGTAAGTTGGTCAGGTTGTGGAT
 
. : . : . : . : . : . :
JMFN016F05+ CCAAAATGGTTTCATGTTGATTCTAGGTTGCTAGGGTAAACATTAATCTCGATCGCAATC
                      ____________________________________________________________
consensus CCAAAATGGTTTCATGTTGATTCTAGGTTGCTAGGGTAAACATTAATCTCGATCGCAATC
 
. : . : . : . : . : . :
JMFN016F05+ ATATGGGTGCGCAGCTTCATCCTCAGCACATCCTCAGGAATCTACTATTGAGTTAATTCC
                      ____________________________________________________________
consensus ATATGGGTGCGCAGCTTCATCCTCAGCACATCCTCAGGAATCTACTATTGAGTTAATTCC
 
. : . : . : . : . : . :
JMFN016F05+ AACATCCTTTTCTTTTGGAACTCGTCCAAAGAAGGTGTTCACTGTATGTATCTCTTCTTT
                      ____________________________________________________________
consensus AACATCCTTTTCTTTTGGAACTCGTCCAAAGAAGGTGTTCACTGTATGTATCTCTTCTTT
 
. : . : . : . : . : . :
JMFN016F05+ GTAACTCTATCCAGACAGCTTAGTTCCAGTCGTCTTACAGATGTTGTAGTCTCGATGCAT
JMSF001P15+ CAGATGTTGTAGTCTCGATGCAT
rJMSF024N12- TCTTTCAGATGTTGTAGTCTCGATGCAT
                      ____________________________________________________________
consensus GTAACTCTATCCAGACAGCTTAGTTCCAGTCGTCTTTCAGATGTTGTAGTCTCGATGCAT
 
. : . : . : . : . : . :
JMFN016F05+ GGTATTGTTTGCTTTGCCGCCCAGATTGTTTCTGCCCGCCGAACACCTACCGCTGGATTG
JMSF001P15+ GGTATTGTTTGCTTTGCCGCCCAGATTGTTTCTGCCCGCCGAACACCTACCGCTGGATCG
rJMSF024N12- GGTATTGTTTGCTTTGCCGCCCAGATTGTTTCTGCCCGCCGAACACCTACCGCTGGATCG
                      ____________________________________________________________
consensus GGTATTGTTTGCTTTGCCGCCCAGATTGTTTCTGCCCGCCGAACACCTACCGCTGGATCG
 
. : . : . : . : . : . :
JMFN016F05+ AGAAGGATTAACCGATTGGTTAGTAGAGTTTCGTCCGGCCGGGTTTCGACTTCGGAAACT
JMSF001P15+ AGGAGGATTAACCGATTGGTTAGTAGAGTTTCGTCCGGCCGGGTTTTGACTTCGGAAACT
rJMSF024N12- AGGAGGATTAACCGATTGGTTAGTAGAGTTTCGTCCGGCCGGGTTTTGACTTCGGAAACT
                      ____________________________________________________________
consensus AGGAGGATTAACCGATTGGTTAGTAGAGTTTCGTCCGGCCGGGTTTTGACTTCGGAAACT
 
. : . : . : . : . : . :
JMFN016F05+ CCAATTAGCTATAATTCAGGCGGTGGTGTGGTAATTTCCGAGTCGCAGCAATTTGTTCTT
JMSF001P15+ CC
rJMSF024N12- CCAATTACCTATAATTCCGGCGGTGGTGTGGTAATTTCCGAGTCGCAGCAATTTGTTCTT
                      ____________________________________________________________
consensus CCAATTAGCTATAATTCCGGCGGTGGTGTGGTAATTTCCGAGTCGCAGCAATTTGTTCTT
 
. : . : . : . : . : . :
JMFN016F05+ TCCAGTGAATTAATCCAGCGTCAACTTCATTTCTTCTTTGCATGCAATCTCAATTTCTGG
rJMSF024N12- TCCCGTGAATTAATCCAGCGTCAGCTTCATTTCTTCTTTGCATGCAATCTCAATTTCTGG
                      ____________________________________________________________
consensus TCCCGTGAATTAATCCAGCGTCAGCTTCATTTCTTCTTTGCATGCAATCTCAATTTCTGG
 
. : . : . : . : . : . :
JMFN016F05+ GCGATGAAATTTGGTCTGGTGCGATG
rJMSF024N12- GCGATGAAATTTGGTCTGGTGCGATGGTAACTCTGGGCAGAACTTATTAATCTGCATAAG
                      ____________________________________________________________
consensus GCGATGAAATTTGGTCTGGTGCGATGGTAACTCTGGGCAGAACTTATTAATCTGCATAAG
 
. : . : . : . : . : . :
rJMSF024N12- AACTCTTTTTTTTTTTTCCCTTTAATTCATTTGCNATGGCNGTTTCNATNGGATTTGCTT
                      ____________________________________________________________
consensus AACTCTTTTTTTTTTTTCCCTTTAATTCATTTGCNATGGCNGTTTCNATNGGATTTGCTT