Contig 013963:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF003D22Sequence362010555 (7)656013963 (3)ref|XP_009594997.1|160PREDICTED: uncharacterized protein LOC104091376 [Nicotiana tomentosiformis]
JMSF019H16Sequence501010555 (7)ref|XP_006349202.1|66.2PREDICTED: uncharacterized protein LOC102604741 [Solanum tuberosum]768013963 (3)ref|XP_009594997.1|234PREDICTED: uncharacterized protein LOC104091376 [Nicotiana tomentosiformis]
JMSF021J06Sequence660010555 (7)emb|CDP17086.1|2e-15unnamed protein product [Coffea canephora]768013963 (3)ref|XP_009594997.1|159PREDICTED: uncharacterized protein LOC104091376 [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF019H16+ AACCAGATGACAAGTT
                      ____________________________________________________________
consensus AACCAGATGACAAGTT
 
. : . : . : . : . : . :
rJMSF019H16+ TTTTCCAAGCCATCACCTGCTTCCTACGGGTTCAGGTCTGTATCTACTAAGCTGTACAGC
                      ____________________________________________________________
consensus TTTTCCAAGCCATCACCTGCTTCCTACGGGTTCAGGTCTGTATCTACTAAGCTGTACAGC
 
. : . : . : . : . : . :
rJMSF019H16+ GGGTGATGCCAGCAAGGCAGAGAAGCAAATCCGAGCTGCTCAGTCGGTGTTCTTAAACTC
                      ____________________________________________________________
consensus GGGTGATGCCAGCAAGGCAGAGAAGCAAATCCGAGCTGCTCAGTCGGTGTTCTTAAACTC
 
. : . : . : . : . : . :
rJMSF019H16+ CCCACACCCACTCGAGATATTGAGTGACCGTGCTGCATATGGGTCTGGAGGAACGGTTCA
rJMSF003D22+ CGAGATATTGAGTGACCGTGCTGCATATGGGTCTGGAGGAACGGTTCA
rJMSF021J06+ CGAGATATTGAGTGACCGTGCTGCATATGGGTCTGGAGGAACGGTTCA
                      ____________________________________________________________
consensus CCCACACCCACTCGAGATATTGAGTGACCGTGCTGCATATGGGTCTGGAGGAACGGTTCA
 
. : . : . : . : . : . :
rJMSF019H16+ AAGAGACCATGACATGAGCTCATACATGAAATCCATCCGCAATGTTATCCAGAAAGAACT
rJMSF003D22+ AAGAGACCATGACATGAGCTCATACATGAAATCCATCCGCAATGTTATCCAGAAAGAACT
rJMSF021J06+ AAGAGACCATGACATGAGCTCATACATGAAATCCATCCGCAATGTTATCCAGAAAGAACT
                      ____________________________________________________________
consensus AAGAGACCATGACATGAGCTCATACATGAAATCCATCCGCAATGTTATCCAGAAAGAACT
 
. : . : . : . : . : . :
rJMSF019H16+ GAACCGCATTAGGAAAGCCAAGAGAGCACAGCGGCGAAGAGTATGGTGGCCGCTTGTGGC
rJMSF003D22+ GAACCGCATTAGGAAAGCCAAGAGAGCACAGCGGCGAAGAGTATGGTGGCCGCTTGTGGC
rJMSF021J06+ GAACCGCATTAGGAAAGCCAAGAGAGCACAGCGGCGAAGAGTATGGTGGCCGCTTGTGGC
                      ____________________________________________________________
consensus GAACCGCATTAGGAAAGCCAAGAGAGCACAGCGGCGAAGAGTATGGTGGCCGCTTGTGGC
 
. : . : . : . : . : . :
rJMSF019H16+ AGTAGACGGGATCAATGGTGGTATTATTTTCCGGAGGCCTGTTGTGTCTGGTAACATGCG
rJMSF003D22+ AGTAGACGGGATCAATGGTGGTATTATTTTCCGGAGGCCTGTTGTGTCTGGTAACATGCG
rJMSF021J06+ AGTAGACGGGATCAATGGTGGTATTATTTTCCGGAGGCCTGTTGTGTCTGGTAACATGCG
                      ____________________________________________________________
consensus AGTAGACGGGATCAATGGTGGTATTATTTTCCGGAGGCCTGTTGTGTCTGGTAACATGCG
 
. : . : . : . : . : . :
rJMSF019H16+ TAACGGGCAGTTCAACTTTGGTGGAATGATTCGAACTGGAAAAGAGTCATTGAAACGGTT
rJMSF003D22+ TAACGGGCAGTTCAACTTTGGTGGAATGATTCGAACTGGAAAAGAGTCATTGAAACGGTT
rJMSF021J06+ TAACGGGCAGTTCAACTTTGGTGGAATGATTCGAACTGGAAAAGAGTCATTGAAACGGTT
                      ____________________________________________________________
consensus TAACGGGCAGTTCAACTTTGGTGGAATGATTCGAACTGGAAAAGAGTCATTGAAACGGTT
 
. : . : . : . : . : . :
rJMSF019H16+ CAGCACGCTAGTTGCATCCCAGCACATGCATTTGCTTGTGGTGCTTATGCTCCCAGCACG
rJMSF003D22+ CAGCACGCTAGTTGCATCCCAGCACATGCATTTGCTTGTGGTGCTTATGCTCCCAGCACG
rJMSF021J06+ CAGCACGCTAGTTGCATCCCAGCACATGCATTTGCTTGTGGTGCTTATGCTCCCAGCACG
                      ____________________________________________________________
consensus CAGCACGCTAGTTGCATCCCAGCACATGCATTTGCTTGTGGTGCTTATGCTCCCAGCACG
 
. : . : . : . : . : . :
rJMSF019H16+ CTTGTTGGTATTAGGGACATTCTCCGCCACTAATACACTACATTGATTGATTGATTGATT
rJMSF003D22+ CTTGTTGGTATTAGGGACATTCTCCGCCACTAATACACTACATTGGTTGATTGATTGATT
rJMSF021J06+ CTTGTTGGTATTAGGGACATTCTCCGCCACTAATACACTACATTGATTGATTGATTGATT
                      ____________________________________________________________
consensus CTTGTTGGTATTAGGGACATTCTCCGCCACTAATACACTACATTGATTGATTGATTGATT
 
. : . : . : . : . : . :
rJMSF019H16+ GTTGAATGGAATGGAATGGAAGATGAATTAGAGGGAGGATTCGTTATTCATTTAGTTGCT
rJMSF003D22+ GTTGAATGGAATGGAATGGAAGATGAATTAGAGGGAGGATTCGTTATTCATTTAGTTGCT
rJMSF021J06+ GTTGAATGGAATGGAATGGAAGATGAATTAGAGGGAGGATTCGTTATTCATTTAGTTGCT
                      ____________________________________________________________
consensus GTTGAATGGAATGGAATGGAAGATGAATTAGAGGGAGGATTCGTTATTCATTTAGTTGCT
 
. : . : . : . : . : . :
rJMSF019H16+ GAAGCAACAAATGTTCCCTGGTTTTCAGAAGGGGAATATAATGGTTGATTATACATGATG
rJMSF003D22+ GAAGCAACAAATGTTCCCTGGTTTCCAGAAGGGGAATATAATGGTTGATTATACATGATG
rJMSF021J06+ GAAGCAACAAATGTTCCCTGGTTTTCAGAAGGGGAATATAATGGTTGATTATACATGATG
                      ____________________________________________________________
consensus GAAGCAACAAATGTTCCCTGGTTTTCAGAAGGGGAATATAATGGTTGATTATACATGATG
 
. : . : . : . : . : . :
rJMSF019H16+ ATGATTCTTGTCATATGTAAACTAGAATTAGCCTTTGTTCAATTTCATGGAAATCCGACA
rJMSF003D22+ ATGATTCTTGTCATATGTAAACTAGAATTAGCCTTTGTTCAATTTCATGGAAATCCGACA
rJMSF021J06+ ATGATTCTTGTCATATGTAAACTAGAATTAGCCTTTGTTCAATTTCATGGAAATCCGACA
                      ____________________________________________________________
consensus ATGATTCTTGTCATATGTAAACTAGAATTAGCCTTTGTTCAATTTCATGGAAATCCGACA
 
. : . : . : . : . : . :
rJMSF019H16+ ACTATGTATATTAACTGTTACGTTGGATG
rJMSF003D22+ ACTATGTATATTAACTGTTACGTTGGATGGAACCCAGAAGTGTTCCAACCGCATATAAAA
rJMSF021J06+ ACTATGTATATTAACTGTTACGTTGGATGGAACCCAGAAGTGTTCCAACCGCATATAAAA
                      ____________________________________________________________
consensus ACTATGTATATTAACTGTTACGTTGGATGGAACCCAGAAGTGTTCCAACCGCATATAAAA
 
. : . : . : . : . : . :
rJMSF003D22+ T
rJMSF021J06+ TTACCATTACTCTATTTGTTTGGTTCTGTTGGATAGTATGTAATGCTTTTTCCACATTTA
                      ____________________________________________________________
consensus TTACCATTACTCTATTTGTTTGGTTCTGTTGGATAGTATGTAATGCTTTTTCCACATTTA
 
. : . : . : . : . : . :
rJMSF021J06+ GGTTGGTTCCAACTTCCAACTGCCAAATCATCCCTCCTGTGCATGTGGAGATGTAGTATA
                      ____________________________________________________________
consensus GGTTGGTTCCAACTTCCAACTGCCAAATCATCCCTCCTGTGCATGTGGAGATGTAGTATA