Contig 013957:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF020I06+                                          CTCCGGGAACCGAGCCACGCTATTCAAC
                      ____________________________________________________________
consensus                                             CTCCGGGAACCGAGCCACGCTATTCAAC
 
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rJMSF030M02+                                   CAGAATCACCCGTTGTGAGCNTTGCTGCCAGGGAT
rJMSF020I06+          GTCGTGGGGCAGCCACTTAGATTTCCAGAATCACCCGTTGTGAGCTTTGCTGCCAGGGAT
                      ____________________________________________________________
consensus             GTCGTGGGGCAGCCACTTAGATTTCCAGAATCACCCGTTGTGAGCTTTGCTGCCAGGGAT
 
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rJMSF030M02+          CTCATACGCGGGCTGCTCATTAAAGAACCACAGAACCGATTGGCTTATAAAAAGGGAGCC
rJMSF020I06+          CTCATACGCGGGCTGCTCATTAAAGAACCACAGAACCGATTGGCTTATAAAAAGGGAGCC
                      ____________________________________________________________
consensus             CTCATACGCGGGCTGCTCATTAAAGAACCACAGAACCGATTGGCTTATAAAAAGGGAGCC
 
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rJMSF030M02+          ACTGAAATAAAGCAGCACCCTTTCTTCGAAGGAGTGAACTGGGCGTTGATACGCTGCGCT
rJMSF020I06+          ACTGAAATAAAGCAGCACCCTTTCTTCGAAGGAGTGAACTGGGCGTTGATACGCTGCGCT
                      ____________________________________________________________
consensus             ACTGAAATAAAGCAGCACCCTTTCTTCGAAGGAGTGAACTGGGCGTTGATACGCTGCGCT
 
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rJMSF030M02+          ACGCCCCCCGAGGTCCCAAAGCCAGTCGAATTCGAGAAATTGCCTGTTCCAGCAGCATCA
rJMSF020I06+          ACGCCCCCCGAGGTCCCAAAGCCAGTCGAATTCGAGAAATTGCCTGTTCCAGCAGCATCA
                      ____________________________________________________________
consensus             ACGCCCCCCGAGGTCCCAAAGCCAGTCGAATTCGAGAAATTGCCTGTTCCAGCAGCATCA
 
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rJMSF030M02+          ACAAGCGAAAAAGCGACTCCTGTCGCAGTGGCCCCCAATCAGAAAGGCTCTGATAATTAC
rJMSF020I06+          ACAAGCGAAAAAGCGACTCCTGTCGCAGTGGCCCCCAATCAGAAAGGCTCTGATAATTAC
                      ____________________________________________________________
consensus             ACAAGCGAAAAAGCGACTCCTGTCGCAGTGGCCCCCAATCAGAAAGGCTCTGATAATTAC
 
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rJMSF030M02+          CTGGAGTTTGATTTCTTCTAGAAAATATTGCTAGTATAATTGGAATGTGTTTGCTCTATG
rJMSF020I06+          CTGGAGTTTGATTTCTTCTAGAAAATATTGCTAGTATAATTGGAATGTGTTTGCTCTATG
                      ____________________________________________________________
consensus             CTGGAGTTTGATTTCTTCTAGAAAATATTGCTAGTATAATTGGAATGTGTTTGCTCTATG
 
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rJMSF030M02+          GAGAAGATACTTTTAAATTCATTCTGAATATTTGGCATTTTAGTAATCTTGATGGCAGAT
rJMSF020I06+          GAGAAGATACTTTTAAATTCATTCTGAATATTTGGCATTTTAGTAATCTTGATGGCAGAT
                      ____________________________________________________________
consensus             GAGAAGATACTTTTAAATTCATTCTGAATATTTGGCATTTTAGTAATCTTGATGGCAGAT
 
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rJMSF030M02+          TTCTTTCCTCATAATAGCAATCTTTTTCAACCTCTTCCATGACAGCTCTATCTCCCAGGA
rJMSF020I06+          TTCTTTCCTCATAATAGCAATCTTTTTCAACCTCTTCCATGACAGCTCTATCTCCCAGGA
                      ____________________________________________________________
consensus             TTCTTTCCTCATAATAGCAATCTTTTTCAACCTCTTCCATGACAGCTCTATCTCCCAGGA
 
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rJMSF030M02+          AACCCGAGGAATTTTTCCGAGCTGATTTGCAGAAACACACGATTTGGGTCGAAACATGAC
rJMSF020I06+          AACCCGAGGAATTTTTCCGAGCTGATTTGCAGAAACACACGATTTGGGTCGAAACATGAC
                      ____________________________________________________________
consensus             AACCCGAGGAATTTTTCCGAGCTGATTTGCAGAAACACACGATTTGGGTCGAAACATGAC
 
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rJMSF030M02+          AGCAGATCAGCCGCCTTATACAAGATCACTCTGTATATTTCTTTTTTTTTATTTTTTTGA
rJMSF020I06+          AGCAGATCAGCCGCCTTATACAAGATCACTCTGTATATTTCTTTTTTTTTATTTTTTTGA
                      ____________________________________________________________
consensus             AGCAGATCAGCCGCCTTATACAAGATCACTCTGTATATTTCTTTTTTTTTATTTTTTTGA
 
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rJMSF030M02+          TAATTCCTAGGATATGTTCCACATTCGAAGGTACATTAGTAGGACCCAATGTAGATGTGC
rJMSF020I06+          TAATTCCTAGGATATGTTCCACATTCGAAGGTACATTAGTAGGACCCAATGTAGATGTGC
                      ____________________________________________________________
consensus             TAATTCCTAGGATATGTTCCACATTCGAAGGTACATTAGTAGGACCCAATGTAGATGTGC
 
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rJMSF030M02+          TCCCCCACCTTTGAGATCTACCATGCTTTTTGAATGTTGGTGTATTA             
rJMSF020I06+          TCCCCCACCTTTGAGATCT-CCATGCTTTTTGAATGTTGGTGTATTATCTGACACTGAAC
                      ____________________________________________________________
consensus             TCCCCCACCTTTGAGATCTACCATGCTTTTTGAATGTTGGTGTATTATCTGACACTGAAC