Contig 013951:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF013C05Sequence375000667 (2)ref|XP_009762727.1|1e-31PREDICTED: tyrosine decarboxylase 1-like isoform X2 [Nicotiana sylvestris]771013951 (2)ref|XP_009762727.1|1e-112PREDICTED: tyrosine decarboxylase 1-like isoform X2 [Nicotiana sylvestris]
JMSF019K08Sequence540000667 (2)ref|XP_009762727.1|5e-86PREDICTED: tyrosine decarboxylase 1-like isoform X2 [Nicotiana sylvestris]756013951 (2)ref|XP_009762727.1|5e-78PREDICTED: tyrosine decarboxylase 1-like isoform X2 [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF013C05+ AGTTC
                      ____________________________________________________________
consensus AGTTC
 
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rJMSF013C05+ CGCCACTATTTGGATGGCGTAGAAGAAAGCTGACTCATTCAACATGAATGCACATAAATG
                      ____________________________________________________________
consensus CGCCACTATTTGGATGGCGTAGAAGAAAGCTGACTCATTCAACATGAATGCACATAAATG
 
. : . : . : . : . : . :
rJMSF013C05+ GTTTCTTACAAACTTCGACTGTTCTGCACTTTGGGTAAAGGACCGGAGTGCTCTCATTCA
                      ____________________________________________________________
consensus GTTTCTTACAAACTTCGACTGTTCTGCACTTTGGGTAAAGGACCGGAGTGCTCTCATTCA
 
. : . : . : . : . : . :
rJMSF013C05+ GGCGCTGTCAACTAATCCTGAATTTCTCAGAAACAAAGCTTCTCAAGCAAATATGGTTGT
rJMSF019K08+ GCTTCTCAAGCAAATATGGTTGT
                      ____________________________________________________________
consensus GGCGCTGTCAACTAATCCTGAATTTCTCAGAAACAAAGCTTCTCAAGCAAATATGGTTGT
 
. : . : . : . : . : . :
rJMSF013C05+ AGATTACAAAGATTGGCAAATTCCCCTTGGACGCAGGTTCAGATCACTGAAACTATGGAT
rJMSF019K08+ AGATTACAAAGATTGGCAAATTCCCCTTGGACGCAGGTTCAGATCACTGAAACTATGGAT
                      ____________________________________________________________
consensus AGATTACAAAGATTGGCAAATTCCCCTTGGACGCAGGTTCAGATCACTGAAACTATGGAT
 
. : . : . : . : . : . :
rJMSF013C05+ GGTATTAAGACTCTATGGCTTGGAGAACCTTCAAGCGTATGTGAAGAACCATATAGAATT
rJMSF019K08+ GGTATTAAGACTCTATGGCTTGGAGAACCTTCAAGCGTATGTGAAGAACCATATAGAATT
                      ____________________________________________________________
consensus GGTATTAAGACTCTATGGCTTGGAGAACCTTCAAGCGTATGTGAAGAACCATATAGAATT
 
. : . : . : . : . : . :
rJMSF013C05+ GGCTAAACGCTTCGAAGAGTTTGTTTCCGAGGACTCGAGGTTTGAGGTTGTGGCGCATCG
rJMSF019K08+ GGCTAAACGCTTCGAAGAGTTTGTTTCCGAGGACTCGAGGTTTGAGGTTGTGGCGCATCG
                      ____________________________________________________________
consensus GGCTAAACGCTTCGAAGAGTTTGTTTCCGAGGACTCGAGGTTTGAGGTTGTGGCGCATCG
 
. : . : . : . : . : . :
rJMSF013C05+ AAAGTTTTCTCTAGTGTGCTTCCGTCTTCGGCCACCTCAGAACGACGAAGATCTTGCAAA
rJMSF019K08+ AAAGTTTTCTCTAGTGTGCTTCCGTCTTCGGCCACCTCAGAACGACGAAGATCTTGCAAA
                      ____________________________________________________________
consensus AAAGTTTTCTCTAGTGTGCTTCCGTCTTCGGCCACCTCAGAACGACGAAGATCTTGCAAA
 
. : . : . : . : . : . :
rJMSF013C05+ CAAACTCAACCGCAATCTGCTGGACGCTGTCAACTCATCTGGAAAAATATTTATCTCACA
rJMSF019K08+ CAAACTCAACCGCAATCTGCTGGACGCTGTCAACTCATCTGGAAAAATATTTATCTCACA
                      ____________________________________________________________
consensus CAAACTCAACCGCAATCTGCTGGACGCTGTCAACTCATCTGGAAAAATATTTATCTCACA
 
. : . : . : . : . : . :
rJMSF013C05+ CACCGTTCTATCCGGCAAATACGTTCTGCGCCTTGCGGTCGGGGCTCCGCTGACGGAAGA
rJMSF019K08+ CACCGTTCTATCCGGCAAATACGTTCTGCGCCTTGCGGTCGGGGCTCCGCTGACGGAAGA
                      ____________________________________________________________
consensus CACCGTTCTATCCGGCAAATACGTTCTGCGCCTTGCGGTCGGGGCTCCGCTGACGGAAGA
 
. : . : . : . : . : . :
rJMSF013C05+ GAGGCATGTGATTGCAGCCTGGAAAGTTTTGCAAGATGAGGGTGCTGCTGCTTTGTTGAG
rJMSF019K08+ GAGGCATGTGATTGCAGCCTGGAAAGTTTTGCAAGATGAGGGTGCTGCTGCTTTGTTGAG
                      ____________________________________________________________
consensus GAGGCATGTGATTGCAGCCTGGAAAGTTTTGCAAGATGAGGGTGCTGCTGCTTTGTTGAG
 
. : . : . : . : . : . :
rJMSF013C05+ AAACTCTTCAAAGATGACCAATTCTTTTGCATAGAGGATTGATTCTCTGCTCCAACCAGT
rJMSF019K08+ AAACTCTTCAAAGATGACCAATTCTTTTGCATAGAGGATTGATTCTCTGCTCCAACCAGT
                      ____________________________________________________________
consensus AAACTCTTCAAAGATGACCAATTCTTTTGCATAGAGGATTGATTCTCTGCTCCAACCAGT
 
. : . : . : . : . : . :
rJMSF013C05+ TTATCCATTCAGATTGTCTGCAAATTTTACTCTTCATTCACAGATTTGCTGTTGAAGTAC
rJMSF019K08+ TTATCCATTCAGATTGTCTGCAAATTTTACTCTTCATTCACAGATTTGCTGTTGAAGTAC
                      ____________________________________________________________
consensus TTATCCATTCAGATTGTCTGCAAATTTTACTCTTCATTCACAGATTTGCTGTTGAAGTAC
 
. : . : . : . : . : . :
rJMSF013C05+ TGAAATTCTTGTGTAATTCTTTGGCAATGGATGAATACTATTGCAC
rJMSF019K08+ TGAAATTCTTGTGTAATTCTTTGGCAATGGATGAATACTATTGCACATTGTATTAAGATG
                      ____________________________________________________________
consensus TGAAATTCTTGTGTAATTCTTTGGCAATGGATGAATACTATTGCACATTGTATTAAGATG