| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF018D03 | Sequence | 321 | 000708 (3) | 791 | 013944 (2) | ref|XP_006351887.1| | 9e-69 | PREDICTED: ALBINO3-like protein 3, mitochondrial-like isoform X4 [Solanum tuber | |||
| JMSF035C06 | Sequence | 634 | 000708 (3) | ref|XP_010312846.1| | 2e-21 | PREDICTED: ALBINO3-like protein 2, chloroplastic [Solanum lycopersicum] ref|XP_0 | 661 | 013944 (2) | ref|XP_006351887.1| | 1e-58 | PREDICTED: ALBINO3-like protein 3, mitochondrial-like isoform X4 [Solanum tuber |
This contig is upended
. : . : . : . : . : . :
rJMSF018D03+ AGTGAGCTGCG
____________________________________________________________
consensus AGTGAGCTGCG
. : . : . : . : . : . :
rJMSF018D03+ TGAGATAGTTGCCCAGAATATATCATCTTCAGAAATGGTTAAAATTTCAACCAAACTNTT
____________________________________________________________
consensus TGAGATAGTTGCCCAGAATATATCATCTTCAGAAATGGTTAAAATTTCAACCAAACTNTT
. : . : . : . : . : . :
rJMSF035C06+ GCGACTTACTATTCATAAGGATCC
rJMSF018D03+ AGCAGAGGGTGAGAAAGATGTGGCTCTTCCACTACTGCGACTTACTATTCATAAGGATCC
____________________________________________________________
consensus AGCAGAGGGTGAGAAAGATGTGGCTCTTCCACTACTGCGACTTACTATTCATAAGGATCC
. : . : . : . : . : . :
rJMSF035C06+ CGAGAACATTAGAGCACTGGCTGTTTTGGGGCAGGCACTGTTGCATTATGGTTACTTAGT
rJMSF018D03+ CGAGAACATTAGAGCACTGGCTGTTTTGGGGCAGGCACTGTTGCATTATGGTTACTTAGT
____________________________________________________________
consensus CGAGAACATTAGAGCACTGGCTGTTTTGGGGCAGGCACTGTTGCATTATGGTTACTTAGT
. : . : . : . : . : . :
rJMSF035C06+ GGAAGCAACTGAATATTTAGAGCATGCTATATCCAAGCTGCTTCGAAATGGTAATCCAAC
rJMSF018D03+ GGAAGCAACTGAATATTTAGAGCATGCTATATCCAAGCTGCTTCGAAATGGTAATCCAAC
____________________________________________________________
consensus GGAAGCAACTGAATATTTAGAGCATGCTATATCCAAGCTGCTTCGAAATGGTAATCCAAC
. : . : . : . : . : . :
rJMSF035C06+ GGGAGGTGACGACGTTGACCTTTTGATCCTATCATCTGAATGGGCAGGTGTAGCTTATAT
rJMSF018D03+ GGGAGGTGACGACGTTGACCTTTTGATCCTATCATCTGAATGGGCAGGTGTAGCTTATAT
____________________________________________________________
consensus GGGAGGTGACGACGTTGACCTTTTGATCCTATCATCTGAATGGGCAGGTGTAGCTTATAT
. : . : . : . : . : . :
rJMSF035C06+ GCGGCAGGGGAAATTTGACGAGGGTATGACACACCTTAAAAGAATAGCTACGATGAAGGA
rJMSF018D03+ GCGGCAGGGGAAATTTGACGAGGGTATGACACACCTTAAAAGAATAGCTACGATGAAGGA
____________________________________________________________
consensus GCGGCAGGGGAAATTTGACGAGGGTATGACACACCTTAAAAGAATAGCTACGATGAAGGA
. : . : . : . : . : . :
rJMSF035C06+ GCCCGAGGATCCAAATTCGAAAGCCAATTACTACGAGGGTTTGGTAGTATTCTCGAGTGG
rJMSF018D03+ GCCCGAGGATCCAAATTCGAAAGCCAATTACTACGAGGGTTTGGTAGTATTCTCGAGTGG
____________________________________________________________
consensus GCCCGAGGATCCAAATTCGAAAGCCAATTACTACGAGGGTTTGGTAGTATTCTCGAGTGG
. : . : . : . : . : . :
rJMSF035C06+ TTTGTGCAATGTGGGGCGTAAAGCTGAAGCTGCCAATTATTTGCGCATGGCAGCCGCTTA
rJMSF018D03+ TTTGTGCAATGTGGGGCGTAAAGCTGAAGCTGCCAATTATTTGCGCATGGCAGCCGCTTA
____________________________________________________________
consensus TTTGTGCAATGTGGGGCGTAAAGCTGAAGCTGCCAATTATTTGCGCATGGCAGCCGCTTA
. : . : . : . : . : . :
rJMSF035C06+ TGATGATTCGTATAAAAGATTCCTAGAAGAATGCGAAGAGGATCTGTGTACAAAAGAAGA
rJMSF018D03+ TGATGATTCGTATAAAAGATTCCTAGAAGAATGCGAAGAGGATCTGTGTACAAAAGAAGA
____________________________________________________________
consensus TGATGATTCGTATAAAAGATTCCTAGAAGAATGCGAAGAGGATCTGTGTACAAAAGAAGA
. : . : . : . : . : . :
rJMSF035C06+ TGAATTTGTCGACGACCTTGTCAATAGCCGGAGAGTTCATTATTGAGTTACCGTGATTTA
rJMSF018D03+ TGAATTTGTCGACGACCTTGTCAATAGCCGGAGAGTTCATTATTGAGTTACCGTGATTTA
____________________________________________________________
consensus TGAATTTGTCGACGACCTTGTCAATAGCCGGAGAGTTCATTATTGAGTTACCGTGATTTA
. : . : . : . : . : . :
rJMSF035C06+ TATCCCCTCCCAAATGTTCTGTCGACTGGGAGTGACGGTTCTTGGGATTGAGGATTCAAC
rJMSF018D03+ TATCCCCTCCCAAATGTTCTGTCGACTGGGAGTGACGGTTCTTGGGATTGAGGATTCAAC
____________________________________________________________
consensus TATCCCCTCCCAAATGTTCTGTCGACTGGGAGTGACGGTTCTTGGGATTGAGGATTCAAC
. : . : . : . : . : . :
rJMSF035C06+ ATTTAGGGAGAAAGAAAGATTTTTTAATACCGTTTTTACGTGTATAATAGTAGCATAGGG
rJMSF018D03+ ATTTAGGGAGAAAGAAAGATTTTTTAATACCGTTTTTACGTGTATAATAGTAGCATAGGG
____________________________________________________________
consensus ATTTAGGGAGAAAGAAAGATTTTTTAATACCGTTTTTACGTGTATAATAGTAGCATAGGG
. : . : . : . : . : . :
rJMSF035C06+ AAACGTTACAATGCCAAAAAAGTGGTACATAAAAATG
rJMSF018D03+ AAACGTTACAATGCCAAAAAAGTGGTACATAAAAATGTCTTATTCAAAAAATAGAAAGTA
____________________________________________________________
consensus AAACGTTACAATGCCAAAAAAGTGGTACATAAAAATGTCTTATTCAAAAAATAGAAAGTA