Contig 013939:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF022M21Sequence596012936 (36)ref|XP_009769268.1|6e-57PREDICTED: pectinesterase-like [Nicotiana sylvestris]720013939 (2)ref|XP_009602351.1|3e-54PREDICTED: uncharacterized protein LOC104097489 isoform X4 [Nicotiana tomentosi
JMSF017C01Sequence384001956 (3)gb|KJB54383.1|3e-29hypothetical protein B456_009G031800 [Gossypium raimondii]785013939 (2)ref|XP_009602351.1|1e-55PREDICTED: uncharacterized protein LOC104097489 isoform X4 [Nicotiana tomentosi

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF022M21+ TCGTGGGTTAGCGCTAGCGATAGGCGGCTTCTGGAAGCTTCGGCGAACGCCGTG
                      ____________________________________________________________
consensus TCGTGGGTTAGCGCTAGCGATAGGCGGCTTCTGGAAGCTTCGGCGAACGCCGTG
 
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rJMFF022M21+ GCTGCCATTCTTGGACATAGTAAAGGAGGGAGTGTTGTGCTCCTGTATGCTTCAATGTAT
rJMSF017C01+ TGGACATAGTAAAGGAGGGAGTGTTGTGCTCCTGTATGCTTCAATGTAT
                      ____________________________________________________________
consensus GCTGCCATTCTTGGACATAGTAAAGGAGGGAGTGTTGTGCTCCTGTATGCTTCAATGTAT
 
. : . : . : . : . : . :
rJMFF022M21+ CATGATGTTCATACACTGGTCAATGTTTCTGGTTGTTTTGATTTCCTTGGAGGCCTTACA
rJMSF017C01+ CATGATGTTCATACACTGGTCAATGTTTCTGGTCGGTTTGATTTGCTTAGAAACGTTAGA
                      ____________________________________________________________
consensus CATGATGTTCATACACTGGTCAATGTTTCTGGTTGTTTTGATTTGCTTGGAGGCGTTAGA
 
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rJMFF022M21+ GAG---------------GAATTCATGGAAAGAATCAAGAAGGATGGATTCGTAGATGTC
rJMSF017C01+ GAGGAATTGGATGATGATGAATTCATGGAAAGAATGAAGAAGGATGGATTCATAGATGTC
                      ____________________________________________________________
consensus GAGGAATTGGATGATGATGAATTCATGGAAAGAATGAAGAAGGATGGATTCGTAGATGTC
 
. : . : . : . : . : . :
rJMFF022M21+ AGAAACGCACAAGGAAAAGTTGTGTACCGTTTTCTTGAGTTATGCCTAACGAATGCGCTG
rJMSF017C01+ AAAAACGCAGAAGGAGAAGTTGTGTACCGTTTTATGGAGTTATGCCTAACGAATCTGCTG
                      ____________________________________________________________
consensus AGAAACGCAGAAGGAGAAGTTGTGTACCGTTTTCTTGAGTTATGCCTAACGAATGTGCTG
 
. : . : . : . : . : . :
rJMFF022M21+ CTAAATCCTAACATGCACGACGCATGTTGTGAGATCGACAAAGCCTGCAGGGTATTGACC
rJMSF017C01+ CTAAATCCTAACATGCACGACGCATGTTGTGAGATCGACAAAGCCTGCAGGGTATTGAGC
                      ____________________________________________________________
consensus CTAAATCCTAACATGCACGACGCATGTTGTGAGATCGACAAAGCCTGCAGGGTATTGAGC
 
. : . : . : . : . : . :
rJMFF022M21+ ATTCATGGATCCAATGATGAGGTGAATCCCATTGGAGGTGCATTTGAGTTCGACCAGGCT
rJMSF017C01+ ATTTATGGATCCAATGATGAGGTGAATCCCATTGAAGATGCATTAGAGTTTGAGAAGGCT
                      ____________________________________________________________
consensus ATTTATGGATCCAATGATGAGGTGAATCCCATTGGAGGTGCATTTGAGTTTGAGCAGGCT
 
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rJMFF022M21+ ATACCAAACCACAAATTGCATATAGTGGAAGGAGCTGACCACTTCTACACGTCGCAGTGG
rJMSF017C01+ ATACCAAACCACAAATTGCATATAGTGGAAGGAGCTGACCACTTCTACACGTCGCACTCG
                      ____________________________________________________________
consensus ATACCAAACCACAAATTGCATATAGTGGAAGGAGCTGACCACTTCTACACGTCGCAGTGG
 
. : . : . : . : . : . :
rJMFF022M21+ AATCTGAGTGAATTAGTTTCCACTGCAATCTCCTTCATAAAACAAGATTTGCAGCAGAAC
rJMSF017C01+ AATCTCAGTGAATTAGTTTCCATTGCAATCTCCTTCATAAAACAAGATTTACACCACAAC
                      ____________________________________________________________
consensus AATCTGAGTGAATTAGTTTCCATTGCAATCTCCTTCATAAAACAAGATTTGCAGCAGAAC
 
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rJMFF022M21+ TAAAAT
rJMSF017C01+ TAAAATATAATGCTGATTTAATTGCAGTTTACAAGCTAAGCCTAAGCTCCCATGGCCGGC
                      ____________________________________________________________
consensus TAAAATATAATGCTGATTTAATTGCAGTTTACAAGCTAAGCCTAAGCTCCCATGGCCGGC
 
. : . : . : . : . : . :
rJMSF017C01+ TTCCTCACTCCATCTGTTCACAATAACTCATTAACTTGTGCCTGCAGGTTCTTTAATTTG
                      ____________________________________________________________
consensus TTCCTCACTCCATCTGTTCACAATAACTCATTAACTTGTGCCTGCAGGTTCTTTAATTTG
 
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rJMSF017C01+ TTCAACTCATCAATCATATTATTCATATACATACCTACCCTACCTTCATTCCCATTTTGC
                      ____________________________________________________________
consensus TTCAACTCATCAATCATATTATTCATATACATACCTACCCTACCTTCATTCCCATTTTGC
 
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rJMSF017C01+ AACAACTCCATGTGGAGGAGTACACGTGCCCAGATGAGTGCGCCTCGTGCGCACCAGAGA
                      ____________________________________________________________
consensus AACAACTCCATGTGGAGGAGTACACGTGCCCAGATGAGTGCGCCTCGTGCGCACCAGAGA
 
. : . : . : . : . : . :
rJMSF017C01+ GCTTCTTTGCTTTTTTGGTGGGCTTCACTTTTTTTGCAAAAATCAAGCTTTTCCTGCAAT
                      ____________________________________________________________
consensus GCTTCTTTGCTTTTTTGGTGGGCTTCACTTTTTTTGCAAAAATCAAGCTTTTCCTGCAAT