Contig 013937:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF035F06+                                                                 GTATCA
                      ____________________________________________________________
consensus                                                                   GTATCA
 
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JMSF035F06+           GATGTTGAAACACTAGAGACCAGTCTATTGTTTAATACCAGATGCTGACCAACTAATATG
                      ____________________________________________________________
consensus             GATGTTGAAACACTAGAGACCAGTCTATTGTTTAATACCAGATGCTGACCAACTAATATG
 
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JMSF035F06+           GTGTCTGTGGGAAGATCAAAACTTTGCCAGATGACACCAGTTTTGTCGTAGATGACAAAG
rJMSF016L24+                       GATCAAAACTTTGCCAGATGACACCAGTTTTGTCGTAGATGACAAAG
                      ____________________________________________________________
consensus             GTGTCTGTGGGAAGATCAAAACTTTGCCAGATGACACCAGTTTTGTCGTAGATGACAAAG
 
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JMSF035F06+           TTACCAGAATCAAGCATGCGGGCTGTTGGAGTAGCAGTCTCTGGGGGATCTGCAATCTCT
rJMSF016L24+          TTACCAGAATCAAGCATGCGGGCTGTTGGAGTAGCAGTCTCTGGGGGATCTGCAATCTCT
                      ____________________________________________________________
consensus             TTACCAGAATCAAGCATGCGGGCTGTTGGAGTAGCAGTCTCTGGGGGATCTGCAATCTCT
 
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JMSF035F06+           TTCCTGCTCCCCTTAGTCCAAAGAATTAGCTTGCCTGTTGCAAACTGCAGATAGGAATCC
rJMSF016L24+          TTCCTGCTCCCCTTAGTCCAAAGAATTAGCTTGCCTGTTGCAAACTGCAGATAGGAATCC
                      ____________________________________________________________
consensus             TTCCTGCTCCCCTTAGTCCAAAGAATTAGCTTGCCTGTTGCAAACTGCAGATAGGAATCC
 
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JMSF035F06+           GAAGGGACCGGAGGGGCATCCCTATCAGCAGTCCAAACAACAGTT-TTTGAGGCGTTCCT
rJMSF016L24+          GAAGGGACCGGAGGGGCATCCCTATCAGCAGTCCAAACAACAGTTCTTTGAGGCGTTCCT
                      ____________________________________________________________
consensus             GAAGGGACCGGAGGGGCATCCCTATCAGCAGTCCAAACAACAGTTCTTTGAGGCGTTCCT
 
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JMSF035F06+           TGCAGCCATATCCCAACTTGAAAACCACCCCCTTGCTGGTAGAAACCAAATGCAAATAGG
rJMSF016L24+          TGCAGCCATATCCCAACTTGAAAACCACCCCCTTGCTGGTAGAAACCAAATGCAAATAGG
                      ____________________________________________________________
consensus             TGCAGCCATATCCCAACTTGAAAACCACCCCCTTGCTGGTAGAAACCAAATGCAAATAGG
 
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JMSF035F06+           CCTGAAGGCGACAACCATGAAGTGGGATGCCGGTCAGGATAAAGCATGGAACCGGAGGTT
rJMSF016L24+          CCTGAAGGCGACAACCATGAAGTGGGATGCCGGTCAGGATAAAGCATGGAACCGGAGGTT
                      ____________________________________________________________
consensus             CCTGAAGGCGACAACCATGAAGTGGGATGCCGGTCAGGATAAAGCATGGAACCGGAGGTT
 
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JMSF035F06+           ATATTGGTGGCAGGCTGCGGTTGAGCAGCAACTCCAGTAGCTACAGCAAATATAATTGGG
rJMSF016L24+          ATATTGGTGGCAGGCTGCGGTTGAGCAGCAACTCCAGTAGCTACAGCAAATATAATTGGG
                      ____________________________________________________________
consensus             ATATTGGTGGCAGGCTGCGGTTGAGCAGCAACTCCAGTAGCTACAGCAAATATAATTGGG
 
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JMSF035F06+           ATGAACAGAAACTTGAAAAGTAAATTAGCCATGATCTGAGGGAGTAAGAAATTGGGAAGG
rJMSF016L24+          ATGAACAGAAACTTGAAAAGTAAATTAGCCATGATCTGAGGGAGTAAGAAATTGGGAAGG
                      ____________________________________________________________
consensus             ATGAACAGAAACTTGAAAAGTAAATTAGCCATGATCTGAGGGAGTAAGAAATTGGGAAGG
 
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JMSF035F06+           AGATCAGAGGTAATTTGCATGAGTAAACAACTGATGACATGAAGATGCAGATGGCCATTG
rJMSF016L24+          AGATCAGAGGTAATTTGCATGAGTAAACAACTGATGACATGAAGATGCAGATGGCCATTG
                      ____________________________________________________________
consensus             AGATCAGAGGTAATTTGCATGAGTAAACAACTGATGACATGAAGATGCAGATGGCCATTG
 
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JMSF035F06+           GATACTAGTTTTCCAGTGGTGGTCATGTTACTCATGTTGAC                   
rJMSF016L24+          GATACTAGTTTTCCAGTGGTGGTCATGTTACTCATGTTGACGGTTAAATATTCCAAGTTT
                      ____________________________________________________________
consensus             GATACTAGTTTTCCAGTGGTGGTCATGTTACTCATGTTGACGGTTAAATATTCCAAGTTT
 
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rJMSF016L24+          TTTCTCTGAAGAAGAGATAAGAAATCATTTAATATCACAGGAATTGGTAGAAGAAAATTA
                      ____________________________________________________________
consensus             TTTCTCTGAAGAAGAGATAAGAAATCATTTAATATCACAGGAATTGGTAGAAGAAAATTA
 
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rJMSF016L24+          AATGTACGTGTGGAAATAATTCCCCCATGTCATCTCCAGGAAAGTGAGTGGGAAAACGAC
                      ____________________________________________________________
consensus             AATGTACGTGTGGAAATAATTCCCCCATGTCATCTCCAGGAAAGTGAGTGGGAAAACGAC
 
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rJMSF016L24+          ATTACAACAAAATGAAAGATCAAATTTAATTCTTTCAACATTTTCTAATGTACAAATAGA
                      ____________________________________________________________
consensus             ATTACAACAAAATGAAAGATCAAATTTAATTCTTTCAACATTTTCTAATGTACAAATAGA