Contig 013931:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF015P14-                                                                     GG
                      ____________________________________________________________
consensus                                                                       GG
 
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JMSF015P14-           CTTTTCGCATCTCCCATCCAACGTTGTACTTTTATACCCCTTCTCTTATTCTTCTGTTCA
                      ____________________________________________________________
consensus             CTTTTCGCATCTCCCATCCAACGTTGTACTTTTATACCCCTTCTCTTATTCTTCTGTTCA
 
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JMSF015P14-           CACATTTTTTGAGAATATTTCTGTCCCGGCGAGGGATAAGCTATTCTCGTTTCTCTGCCC
                      ____________________________________________________________
consensus             CACATTTTTTGAGAATATTTCTGTCCCGGCGAGGGATAAGCTATTCTCGTTTCTCTGCCC
 
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JMSF015P14-           CCAAACGAAATCTGGTGTTTGTTTCTCATGGAAGGGTGCAATAAGCGAGTCCGGGATGAG
JMFF025I16-                                                 CAATAAGCGAGTCCGGGATGAG
                      ____________________________________________________________
consensus             CCAAACGAAATCTGGTGTTTGTTTCTCATGGAAGGGTGCAATAAGCGAGTCCGGGATGAG
 
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JMSF015P14-           TCGGAATTGGACTCGGTCTCGCCCGAGCCCAAGCGAGTTGACACGAAGGCTGACTCGCGG
JMFF025I16-           TCGGAATTGGACTCGGTCTCGCCCGAGCCCAAGCGAGTTGACACGAAGGCTGACTCGCGG
rJMFF025I16+                            TCGCCCGAGCCCAAGCGAGTTGACACGAAGGCTGACTCGCGG
                      ____________________________________________________________
consensus             TCGGAATTGGACTCGGTCTCGCCCGAGCCCAAGCGAGTTGACACGAAGGCTGACTCGCGG
 
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JMSF015P14-           GTCAACTCATCTGGCTCGGAGCGAGTCAACTCGGAGGGGCTACACTCCGGTGAGTCGGAA
JMFF025I16-           GTCAACTCATCTGGCTCGGAGCGAGTCAACTCGGAGGGGCTACACTCCGGTGAGTCGGAA
rJMFF025I16+          GTCAACTCATCTGGCTCGGAGCGAGTCAACTCGGAGGGGCTACACTCCGGTGAGTCGGAA
                      ____________________________________________________________
consensus             GTCAACTCATCTGGCTCGGAGCGAGTCAACTCGGAGGGGCTACACTCCGGTGAGTCGGAA
 
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JMSF015P14-           CGGGTCGAGGTGGAATCGGCGGCTAACTCGGACGAGTTCAATTTGGACTCACCGGTGGTC
JMFF025I16-           CGGGTCGAGGTGGAATCGGCGGCTAACTCGGACGAGTTCAATTTGGACTCACCGGTGGTC
rJMFF025I16+          CGGGTCGAGGTGGAATCGGCGGCTAACTCGGACGAGTTCAATTTGGACTCACCGGTGGTC
                      ____________________________________________________________
consensus             CGGGTCGAGGTGGAATCGGCGGCTAACTCGGACGAGTTCAATTTGGACTCACCGGTGGTC
 
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JMSF015P14-           TTGCAATTCGGAGATGATATTCTGGATATCTTAGATGAGCCGGACGCGCTGACGGAGCGT
JMFF025I16-           TTGCAATTCGGAGATGATATTCTGGATATCTTAGATGAGCCGGACGCGCTGACGGAGCGT
rJMFF025I16+          TTGCAATTCGGAGATGATATTCTGGATATCTTAGATGAGCCGGACGCGCTGACGGAGCGT
                      ____________________________________________________________
consensus             TTGCAATTCGGAGATGATATTCTGGATATCTTAGATGAGCCGGACGCGCTGACGGAGCGT
 
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JMSF015P14-           GACCCGGTTATTCAGGATCTCGACTCGGTTATCAG                         
JMFF025I16-           GACCCGGTTATTCAGGATCTCGACTCGGTTATCAGAAGTTTCGAAGAAGAAATTCTCCAT
rJMFF025I16+          GACCCGGTTATTCAGGATCTCGACTCGGTTATCAGAAGTTTCGAAGAAGAAATTCTCCAT
                      ____________________________________________________________
consensus             GACCCGGTTATTCAGGATCTCGACTCGGTTATCAGAAGTTTCGAAGAAGAAATTCTCCAT
 
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JMFF025I16-           CCCGCGCCGGCGGAGCAGGCCGTCGTCGACCTGGCGTCATCACATTCCGGCGAGTCCCAA
rJMFF025I16+          CCCGCGCCGGCGGAGCAGGCCGTCGTCGACCTGGCGTCATCACATTCCGGCGAGTCCCAA
                      ____________________________________________________________
consensus             CCCGCGCCGGCGGAGCAGGCCGTCGTCGACCTGGCGTCATCACATTCCGGCGAGTCCCAA
 
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JMFF025I16-           CCGGATCTCGGCTTCCTTCTGGAGGCCTCAGACGACGAACTTGGCCTCCCTCCCACCGTA
rJMFF025I16+          CCGGATCTCGGCTTCCTTCTGGAGGCCTCAGACGACGAACTTGGCCTCCCTCCCACCGTA
rJMSF015P14+                                             CGAACTTGGCCTCCCTCCCNCCGTA
                      ____________________________________________________________
consensus             CCGGATCTCGGCTTCCTTCTGGAGGCCTCAGACGACGAACTTGGCCTCCCTCCCACCGTA
 
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JMFF025I16-           CCTTCCCCGGAAAAACAAGGCACTAACGATGATGCGGCCGATTTGCCGGCCGGCGGGCGC
rJMFF025I16+          CCTTCCCCGGAAAAACAAGGCACTAACGATGATGCGGCCGATTTGCCGGCCGGC-GGCGC
rJMSF015P14+          CCTTCCCCGGAAAAACAAGGCACTAACGATGATGCGGCCGATTTGCCGGCCGGC-GGCNC
                      ____________________________________________________________
consensus             CCTTCCCCGGAAAAACAAGGCACTAACGATGATGCGGCCGATTTGCCGGCCGGC-GGCGC
 
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JMFF025I16-           CTCGGTGTTGGATAACCTGATGGGGTATGAGGGCGAGTTGACGAGTTACGACTCGT    
rJMFF025I16+          CTCGGTGTTGGATAACCTGATGGGGTATGAGGGCGAGTTGACGAGTTACGACTCGTTCCA
rJMSF015P14+          CTCGGNGTTGGATAACCTGATGGGGTATGAGGGCGAGTTGACGAGTTACGACTCGTTCCC
                      ____________________________________________________________
consensus             CTCGGTGTTGGATAACCTGATGGGGTATGAGGGCGAGTTGACGAGTTACGACTCGTTCCC
 
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rJMFF025I16+          CCTCGGTATCGACGGGATAACAGAAGGAGACAATTACGGTGGTAACAATGGCGGTGAATT
rJMSF015P14+          CCTCGGTATNGNCGGGATAACNGAAGGNGNCNATTNCGGNGGTAACNANGGCGGNGAATT
                      ____________________________________________________________
consensus             CCTCGGTATCGACGGGATAACAGAAGGAGACAATTACGGTGGTAACAATGGCGGTGAATT
 
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rJMFF025I16+          TGTGACCGTCGATGGCCTCTTTGATTTCTCGGAACCGTCAGATTTTGCGGAGTTCTCGTG
rJMSF015P14+          TGNGACCGTCGATGGCCTCTTTGATTTNTNGGAACCGTCNGATTTTGCGGNGTTNTCGNG
                      ____________________________________________________________
consensus             TGTGACCGTCGATGGCCTCTTTGATTTCTCGGAACCGTCAGATTTTGCGGAGTTCTCGTG
 
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rJMFF025I16+          GAGGCCCGAGTCTTTACCCGCTGTATAGCACGGGTCAACCCGGATTTAGAACCGGGTTAT
rJMSF015P14+          GNGGCCCGNGTCTTTACCCNCNGTATAGCCCGGGTCNACCCGGATTTAGAACCGGGNTAT
                      ____________________________________________________________
consensus             GAGGCCCGAGTCTTTACCCGCTGTATAGCCCGGGTCAACCCGGATTTAGAACCGGGTTAT
 
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rJMFF025I16+          TGTGTTATCGTGACTCGTGAGAATAGCGGCGGCGACGTCCTAGCGTAGGATATGTAAATC
rJMSF015P14+          TGNGTTATCGNGACTCGNGNGAANAGCGGCGGNGACGTCCTAGCGTNGGATATGTAAATC
                      ____________________________________________________________
consensus             TGTGTTATCGTGACTCGTGAGAATAGCGGCGGCGACGTCCTAGCGTAGGATATGTAAATC
 
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rJMFF025I16+          ATTATAAATTATAAAA                                            
rJMSF015P14+          CTTNTAAATTATAAAATGAAACNCNAGAAATGGAAAAAGAAAATTGTCNGAAAAATGGCC
                      ____________________________________________________________
consensus             CTTATAAATTATAAAATGAAACNCNAGAAATGGAAAAAGAAAATTGTCNGAAAAATGGCC
 
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rJMSF015P14+          TGACCCCTTAGGTTTTTTTTTTTATTTTTTATTTTTTTTATTTTATATTTTTTACTGATT
                      ____________________________________________________________
consensus             TGACCCCTTAGGTTTTTTTTTTTATTTTTTATTTTTTTTATTTTATATTTTTTACTGATT
 
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rJMSF015P14+          TGTTTAATATTTATTTTTTCACTAAAATAAGTTGTTACAACGAAAGAAAATTTGACGTAA
                      ____________________________________________________________
consensus             TGTTTAATATTTATTTTTTCACTAAAATAAGTTGTTACAACGAAAGAAAATTTGACGTAA
 
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rJMSF015P14+          CTAATTCAGAAAAAAAAAGATTTTATTTACAATTATTTATTTTGAGATGATGTTAAATAG
                      ____________________________________________________________
consensus             CTAATTCAGAAAAAAAAAGATTTTATTTACAATTATTTATTTTGAGATGATGTTAAATAG
 
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rJMSF015P14+          GTTTGTTGGTTTTTGGGTTTTCGGGCCCAAGGAGGTCCAACACAACCTTTGGCTGGAGGA
                      ____________________________________________________________
consensus             GTTTGTTGGTTTTTGGGTTTTCGGGCCCAAGGAGGTCCAACACAACCTTTGGCTGGAGGA