| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF015D16 | Sequence | 510 | 003732 (2) | 752 | 013923 (3) | ref|XP_002529368.1| | 7e-107 | serine-threonine kinase receptor-associated protein, putative [Ricinus communis | |||
| JMSF030L11 | Sequence | 625 | 003732 (2) | ref|XP_010688097.1| | 1e-11 | PREDICTED: serine-threonine kinase receptor-associated protein-like [Beta vulga | 751 | 013923 (3) | ref|XP_002529368.1| | 7e-107 | serine-threonine kinase receptor-associated protein, putative [Ricinus communis |
| JMSF031L11 | Sequence | 698 | 013923 (3) | ref|XP_002529368.1| | 2e-94 | serine-threonine kinase receptor-associated protein, putative [Ricinus communis | |||||
This contig is upended
. : . : . : . : . : . :
rJMSF030L11+ TTCTGGTACAGTTAGGACAGTTGCTTGGCTACA
rJMSF015D16+ GTTAGGACAGTTGCTTGGCTACA
____________________________________________________________
consensus TTCTGGTACAGTTAGGACAGTTGCTTGGCTACA
. : . : . : . : . : . :
rJMSF030L11+ CAGTGATCAAACCATATTAAGTTCCTGCAGTGATATGGGTGGAATTAGAATCTGGGATTT
rJMSF031L11+ TTCCTGCAGTGATATGGGTGGAATTAGAATCTGGGATTT
rJMSF015D16+ CAGTGATCAAACCATATTAAGTTCCTGCAGTGATATGGGTGGAATTAGAATCTGGGATTT
____________________________________________________________
consensus CAGTGATCAAACCATATTAAGTTCCTGCAGTGATATGGGTGGAATTAGAATCTGGGATTT
. : . : . : . : . : . :
rJMSF030L11+ AAGAAGCAGTGAAGTTGTTCAAACCCTTGAGACCAAATCTTCTGTAACAAGTGCTGAAGT
rJMSF031L11+ AAGAAGCAGTGAAGTTGTTCAAACCCTTGAGACCAAATCTTCTGTAACAAGTGCTGAAGT
rJMSF015D16+ AAGAAGCAGTGAAGTTGTTCAAACCCTTGAGACCAAATCTTCTGTAACAAGTGCTGAAGT
____________________________________________________________
consensus AAGAAGCAGTGAAGTTGTTCAAACCCTTGAGACCAAATCTTCTGTAACAAGTGCTGAAGT
. : . : . : . : . : . :
rJMSF030L11+ ATCTCAGGACGGCCGTTATATTACGACTGCTGATGGTTGCTCTGTCAAGTTTTGGGATGC
rJMSF031L11+ ATCTCAGGACGGCCGTTATATTACGACTGCTGATGGTTGCTCTGTCAAGTTTTGGGATGC
rJMSF015D16+ ATCTCAGGACGGCCGTTATATTACGACTGCTGATGGTTGCTCTGTCAAGTTTTGGGATGC
____________________________________________________________
consensus ATCTCAGGACGGCCGTTATATTACGACTGCTGATGGTTGCTCTGTCAAGTTTTGGGATGC
. : . : . : . : . : . :
rJMSF030L11+ TAATCACTTTGGATTGGTAAAGAGCTATGACATGCCCTGCAATGTTGAATCTGCTTCCTT
rJMSF031L11+ TAATCACTTTGGATTGGTAAAGAGCTATGACATGCCCTGCAATGTTGAATCTGCTTCCTT
rJMSF015D16+ TAATCACTTTGGATTGGTAAAGAGCTATGACATGCCCTGCAATGTTGAATCTGCTTCCTT
____________________________________________________________
consensus TAATCACTTTGGATTGGTAAAGAGCTATGACATGCCCTGCAATGTTGAATCTGCTTCCTT
. : . : . : . : . : . :
rJMSF030L11+ GGAACCAAAGTTTGGTAACAAGTTCATTGCTGGAGGGGAAGATATGTGGGTTCGTCTCTT
rJMSF031L11+ GGAACCAAAGTTTGGTAACAAGTTCATTGCTGGAGGGGAAGATATGTGGGTTCGTCTCTT
rJMSF015D16+ GGAACCAAAGTTTGGTAACAAGTTCATTGCTGGAGGGGAAGATATGTGGGTTCGTCTCTT
____________________________________________________________
consensus GGAACCAAAGTTTGGTAACAAGTTCATTGCTGGAGGGGAAGATATGTGGGTTCGTCTCTT
. : . : . : . : . : . :
rJMSF030L11+ CAATTTTCAAACTGGAGAAATGATTGGATGCAACAAAGGGCACCATGGCCCTGTACACTG
rJMSF031L11+ CAATTTTCAAACTGGAGAAATGATTGGATGCAACAAAGGGCACCATGGCCCTGTACACTG
rJMSF015D16+ CAATTTTCAAACTGGAGAAATGATTGGATGCAACAAAGGGCACCATGGCCCTGTACACTG
____________________________________________________________
consensus CAATTTTCAAACTGGAGAAATGATTGGATGCAACAAAGGGCACCATGGCCCTGTACACTG
. : . : . : . : . : . :
rJMSF030L11+ TGTACGATTCTCTCCAGGAGGAGAATCTTTTGCATCGGGATCAGAAGATGGAACAATTAG
rJMSF031L11+ TGTACGATTCTCTCCAGGAGGAGAATCTTTTGCATCGGGATCAGAAGATGGAACAATTAG
rJMSF015D16+ TGTACGATTCTCTCCAGGAGGAGAATCTTTTGCATCGGGATCAGAAGATGGAACAATTAG
____________________________________________________________
consensus TGTACGATTCTCTCCAGGAGGAGAATCTTTTGCATCGGGATCAGAAGATGGAACAATTAG
. : . : . : . : . : . :
rJMSF030L11+ AATATGGCAGACTGGTCCTCGGGATCAAAATCAAGCAGAGACTTGGGCTGTTAATGGACC
rJMSF031L11+ AATATGGCAGACTGGTCCTCGGGATCAAAATCAAGCAGAGACTTGGGCTGTTAATGGACC
rJMSF015D16+ AATATGGCAGACTGGTCCTCGGGATCAAAATCAAGCAGAGACTTGGGCTGTTAATGGACC
____________________________________________________________
consensus AATATGGCAGACTGGTCCTCGGGATCAAAATCAAGCAGAGACTTGGGCTGTTAATGGACC
. : . : . : . : . : . :
rJMSF030L11+ GATTGCAAACACAAGAGATGGCAATGAGGAGGTGGCCAATAGGATTGAACAGTTACACAT
rJMSF031L11+ GATTGCAAACACAAGAGATGGCAATGAGGAGGTGGCCAATAGGATTGAACAGTTACACAT
rJMSF015D16+ GATTGCAAACACAAGAGATGGCAATGAGGAGGTGGCCAATAGGATTGAACAGTTACACAT
____________________________________________________________
consensus GATTGCAAACACAAGAGATGGCAATGAGGAGGTGGCCAATAGGATTGAACAGTTACACAT
. : . : . : . : . : . :
rJMSF030L11+ TGCCGAAGGAGGGAAGATTGATGAGAATAAGGGACAGTTACAGGCAAATGATGTCTGAAG
rJMSF031L11+ TGCCGAAGGAGGGAAGATTGATGAGAATAAGGGACAGTTACAGGCAAATGATGTCTGAAG
rJMSF015D16+ TGCCGAAGGAGGGAAGATTGATGAGAATAAGGGACAGTTACAGGCAAATGATGTCTGAAG
____________________________________________________________
consensus TGCCGAAGGAGGGAAGATTGATGAGAATAAGGGACAGTTACAGGCAAATGATGTCTGAAG
. : . : . : . : . : . :
rJMSF030L11+ AGGGTAGAATAGCTAGCGCTTTTTGTTCCATCTATGTATGTTCTGCACTGGTTTGGAAGC
rJMSF031L11+ AGGGTAGAATAGCTAGCGCTTTTTGTTCCATCTATGTATGTTCTGCACTGGTTTGGAAGC
rJMSF015D16+ AGGGTAGAATAGCTAGCGCTTTTTGTTCCATCTATGTATGTTCTGCACTGGTTTGGAAGC
____________________________________________________________
consensus AGGGTAGAATAGCTAGCGCTTTTTGTTCCATCTATGTATGTTCTGCACTGGTTTGGAAGC
. : . : . : . : . : . :
rJMSF030L11+ TGTAAGTTGATAGTAATTTCTGAGGATAGTATATGGTATGGTT
rJMSF031L11+ TGTAAGTTGATAGTAATTTCTGAGGATAGTATATGGTATGGTT
rJMSF015D16+ TGTAAGTTGATAGTAATTTCTGAGGATAGTATATGGTATGGTTTGAATAAGACCGATCTT
____________________________________________________________
consensus TGTAAGTTGATAGTAATTTCTGAGGATAGTATATGGTATGGTTTGAATAAGACCGATCTT