Contig 013919:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN012E14Sequence621013919 (4)gb|KDP44349.1|9e-07hypothetical protein JCGZ_19216 [Jatropha curcas]
JMSF008D07Sequence284013296 (6)773013919 (4)ref|XP_004228602.1|4e-06PREDICTED: putative uncharacterized protein FLJ22184 [Solanum lycopersicum] ref
JMSF013P06Sequence439013296 (6)ref|XP_004228602.1|1e-27PREDICTED: putative uncharacterized protein FLJ22184 [Solanum lycopersicum] ref705013919 (4)ref|XP_004228602.1|2e-06PREDICTED: putative uncharacterized protein FLJ22184 [Solanum lycopersicum] ref
JMSF018A18Sequence233013296 (6)774013919 (4)ref|XP_004228602.1|5e-06PREDICTED: putative uncharacterized protein FLJ22184 [Solanum lycopersicum] ref

Alignment

This contig is upended


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JMFN012E14-                  TTCCAAGGCCGGTTAGTCGTTTTGATCCTCCGAATATTCCATTACAAAACCAA
                      ____________________________________________________________
consensus                    TTCCAAGGCCGGTTAGTCGTTTTGATCCTCCGAATATTCCATTACAAAACCAA
 
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JMFN012E14-           TTAATTCAGCCAGGTCATGCACCTCAGACCCCATCTATTAGACCAGAAATGCGCAACTTG
rJMSF008D07+                                                    CCAGAAATGCGCNACTTG
                      ____________________________________________________________
consensus             TTAATTCAGCCAGGTCATGCACCTCAGACCCCATCTATTAGACCAGAAATGCGCAACTTG
 
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JMFN012E14-           AACCCCTCACATGCATTGCCGAGTTTCCCTGAACTCCAAGTAAACAACAGAATGATTCAG
rJMSF008D07+          AACCCCTCACATGCATTGCCGAGTTTCCCTGAACTCCAAGTAAACAACAGAATGATTCAG
rJMSF018A18+                                              CAAGTAAACAACAGAATGATTCAG
                      ____________________________________________________________
consensus             AACCCCTCACATGCATTGCCGAGTTTCCCTGAACTCCAAGTAAACAACAGAATGATTCAG
 
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JMFN012E14-           CGGCAACCTGTACCAGTCAACTTTTCTGGAGGTCCTGCTGGCCCTCCACCTCCAATTAGG
rJMSF008D07+          CGGCAACCTGTACCAGTCAACTTTTCTGGAGGTCCTGCTGGCCCTCCACCTCCAATTAGG
rJMSF018A18+          CGGCAACCTGTACCAGTCAACTTTTCTGGAGGTCCTGCTGGCCCTCCACCTCCAATTAGG
                      ____________________________________________________________
consensus             CGGCAACCTGTACCAGTCAACTTTTCTGGAGGTCCTGCTGGCCCTCCACCTCCAATTAGG
 
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JMFN012E14-           CCCATGCCATTTCCAAATTCAGGTAATCCATCTACAATTTCTTTTGCTCACATGCATCCA
rJMSF008D07+          CCCATGCCATTTCCAAATTCAGGTAATCCATCTACAATTTCTTTTGCTCACATGCATCCA
rJMSF018A18+          CCCATGCCATTTCCAAATTCAGGTAATCCATCTACAATTTCTTTTGCTCACATGCATCCA
rJMSF013P06+                         AATTCAGGTAATCCATCTACAATTTCTTTTGCTCACATGCATCCA
                      ____________________________________________________________
consensus             CCCATGCCATTTCCAAATTCAGGTAATCCATCTACAATTTCTTTTGCTCACATGCATCCA
 
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JMFN012E14-           AGGAACTTCAATCCAGTGGCTCCACCGGTGAACTCTGGTAGTTATCCTCCTAGAACAGGA
rJMSF008D07+          AGGAACTTCAATCCAGTGGCTCCACCGGTGAACTCTGGTAGTTATCCTCCTAGAACAGGA
rJMSF018A18+          AGGAACTTCAATCCAGTGGCTCCACCGGTGAACTCTGGTAGTTATCCTCCTAGAACAGGA
rJMSF013P06+          AGGAACTTCAATCCAGTGGCTCCACCGGTGAACTCTGGTAGTTATCCTCCTAGAACAGGA
                      ____________________________________________________________
consensus             AGGAACTTCAATCCAGTGGCTCCACCGGTGAACTCTGGTAGTTATCCTCCTAGAACAGGA
 
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JMFN012E14-           AACCTGATGTTTCACCAGAATAATCCAGCAATGATGACTCATCCACCAAACTTTCCAACT
rJMSF008D07+          AACCTGATGTTTCACCAGAATAATCCAGCAATGATGACTCATCCACCAAACTTTCCAACT
rJMSF018A18+          AACCTGATGTTTCACCAGAATAATCCAGCAATGATGACTCATCCACCAAACTTTCCAACT
rJMSF013P06+          AACCTGATGTTTCACCAGAATAATCCAGCAATGATGACTCATCCACCAAACTTTCCAACT
                      ____________________________________________________________
consensus             AACCTGATGTTTCACCAGAATAATCCAGCAATGATGACTCATCCACCAAACTTTCCAACT
 
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JMFN012E14-           TCGAACAACGAATTTCGACCCAGTAAGCCAGCCCCTGGCCCTTTTGGAGTGCAGCAAACA
rJMSF008D07+          TCGAACAACGAATTTCGACCCAGTAAGCCAGCCCCTGGCCCTTTTGGAGTGCAGCAAACA
rJMSF018A18+          TCGAACAACGAATTTCGACCCAGTAAGCCAGCCCCTGGCCCTTTTGGAGTGCAGCAAACA
rJMSF013P06+          TCGAACAACGAATTTCGACCCAGTAAGCCAGCCCCTGGCCCTTTTGGAGTGCAGCAAACA
                      ____________________________________________________________
consensus             TCGAACAACGAATTTCGACCCAGTAAGCCAGCCCCTGGCCCTTTTGGAGTGCAGCAAACA
 
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JMFN012E14-           TATGATCCCTTTTCACCAACATCTCTCTCTTAAGCAGCTTCCCAGTGGTAGTGCAAAAGG
rJMSF008D07+          TATGATCCCTTTTCACCAACATCTCTCTCTTAAGCAGCTTCCCAGTGGTAGTGCAAAAGG
rJMSF018A18+          TATGATCCCTTTTCACCAACATCTCTCTCTTAAGCAGCTTCCCAGTGGTAGTGCAAAAGG
rJMSF013P06+          TATGATCCCTTTTCACCAACATCTCTCTCTTAAGCAGCTTCCCAGTGGTAGTGCAAAAGG
                      ____________________________________________________________
consensus             TATGATCCCTTTTCACCAACATCTCTCTCTTAAGCAGCTTCCCAGTGGTAGTGCAAAAGG
 
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JMFN012E14-           CACAAAAAACTTGGAGTTATCTTGAGTGCATGAACTCAGTTGCCCAACCAAGTCAAGTGA
rJMSF008D07+          CACAAAAAACTTGGAGTTATCTTGAGTGCATGAACTCAGTTGCCCAACCAAGTCAAGTGA
rJMSF018A18+          CACAAAAAACTTGGAGTTATCTTGAGTGCATGAACTCAGTTGCCCAACCAAGTCAAGTGA
rJMSF013P06+          CACAAAAAACTTGGAGTTATCTTGAGTGCATGAACTCAGTTGCCCAACCAAGTCAAGTGA
                      ____________________________________________________________
consensus             CACAAAAAACTTGGAGTTATCTTGAGTGCATGAACTCAGTTGCCCAACCAAGTCAAGTGA
 
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JMFN012E14-           GCTTTTCTAGCCAGTTCTAATTTGTTCA                                
rJMSF008D07+          GCTTTTCTAGCCAGTTCTAATTTGTTCAGATGCACTTGGGAACTAATAGGACTAAGCTGA
rJMSF018A18+          GCTTTTCTAGCCAGTTCTAATTTGTTCAGATGCACTTGGGAACTAATAGGACTAAGCTGA
rJMSF013P06+          GCTTTTCTAGCCAGTTCTAATTTGTTCAGATGCACTTGGGAACTAATAGGACTAAGCTGA
                      ____________________________________________________________
consensus             GCTTTTCTAGCCAGTTCTAATTTGTTCAGATGCACTTGGGAACTAATAGGACTAAGCTGA
 
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rJMSF008D07+          AGAAGGCATGACACTGCTGTGTTGGTAATTCACAAATGTTTACAGTTCATGAACTGCTTC
rJMSF018A18+          AGAAGGCATGACACTGCTGTGTTGGTAATTCACAAATGTTTACAGTTCATGAACTGCTTC
rJMSF013P06+          AGAAGGCATGACACTGCTGTGTTGGTAATTCACAAATGTTTACAGTTCATGAACTGCTTC
                      ____________________________________________________________
consensus             AGAAGGCATGACACTGCTGTGTTGGTAATTCACAAATGTTTACAGTTCATGAACTGCTTC
 
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rJMSF008D07+          CTTAACATAGATAAGCAAGTAGGTTCTTTCTGCTCTAATAGTTGATTGTACTATTAATAC
rJMSF018A18+          CTTAACATAGATAAGCAAGTAGGTTCTTTCTGCTCTAATAGTTGATTGTACTATTAATAC
rJMSF013P06+          CTTAACATAGATAAGCAAGTAGGTTTTTTCTGCTCTAATAGTTGATTGTACTATTAATAC
                      ____________________________________________________________
consensus             CTTAACATAGATAAGCAAGTAGGTTCTTTCTGCTCTAATAGTTGATTGTACTATTAATAC
 
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rJMSF008D07+          TTTCTAGGGTTAGAAAACTTGCCCCCCCACCCTCCCTAACAAAGGGGGAAAAAAGGGTGA
rJMSF018A18+          TTTCTAGGGTTAGAAAACTTGCCCCCCCACCCTCCCTAACAAAGGGGGAAAAAAGGGTGA
rJMSF013P06+          TTTCTAGGGTTAGAAAACTTGCCCCCCCACCCTCCCTAACAAAGGGGGAAAAAAGGGTGA
                      ____________________________________________________________
consensus             TTTCTAGGGTTAGAAAACTTGCCCCCCCACCCTCCCTAACAAAGGGGGAAAAAAGGGTGA
 
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rJMSF008D07+          AAAAAGATTCCTTTAGTTTTGTTATT                                  
rJMSF018A18+          AAAAAGATTCCTTTAGTTTTGTTATTTGAATTTGAAGTAGGAGTACATTATACAGTCGAA
rJMSF013P06+          AAAAAGATTCCTTTAGTTTTGTTATTTGAATTTGAAGTAGGAGTACATTATACAGTCGAA
                      ____________________________________________________________
consensus             AAAAAGATTCCTTTAGTTTTGTTATTTGAATTTGAAGTAGGAGTACATTATACAGTCGAA
 
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rJMSF018A18+          ATGGTTGAGCAAAAGTTTAATCAGCTGACC                              
rJMSF013P06+          ATGGTTGAGCAAAAGTTTAATCAGCTGACCAAACTCCAAAGTGTTGTCAAGTTATCAATT
                      ____________________________________________________________
consensus             ATGGTTGAGCAAAAGTTTAATCAGCTGACCAAACTCCAAAGTGTTGTCAAGTTATCAATT