Contig 013915:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMCP002D02Sequence244013915 (4)
JMFN005O05Sequence627013915 (4)gb|KHN13973.1|5e-51Homeobox protein knotted-1-like 4 [Glycine soja]
JMSF013E11Sequence510017787ref|XP_009622162.1|3e-23PREDICTED: homeobox protein knotted-1-like LET12 isoform X1 [Nicotiana tomentos729013915 (4)gb|KHN13973.1|2e-44Homeobox protein knotted-1-like 4 [Glycine soja]
JMSF024K16Sequence662006532 (3)emb|CDO98221.1|5e-75unnamed protein product [Coffea canephora]410013915 (4)

Alignment

This contig is upended


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JMFN005O05-                                 AAGAATTGAAGCATGAGCTCAAACATGGTTACAAGGAA
rJMSF013E11+                                                             TACAAGGAA
                      ____________________________________________________________
consensus                                   AAGAATTGAAGCATGAGCTCAAACATGGTTACAAGGAA
 
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JMFN005O05-           AAGATCGTGGACATCAGAGAGGAAATTTTACGCAAGCGAAGAGCCGGAAAGCTGCCTGGT
rJMSF013E11+          AAGATCGTGGACATCAGAGAGGAAATTTTACGCAAGCGAAGAGCCGGAAAGCTGCCTGGT
                      ____________________________________________________________
consensus             AAGATCGTGGACATCAGAGAGGAAATTTTACGCAAGCGAAGAGCCGGAAAGCTGCCTGGT
 
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JMFN005O05-           GATACTACATCTGTCTTGAAAGCATGGTGGCAGTCACACTCAAAATGGCCATATCCAACG
rJMSF013E11+          GATACTACATCTGTCTTGAAAGCATGGTGGCAGTCACACTCAAAATGGCCATATCCAACG
                      ____________________________________________________________
consensus             GATACTACATCTGTCTTGAAAGCATGGTGGCAGTCACACTCAAAATGGCCATATCCAACG
 
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JMFN005O05-           GAGGAAGACAAAGCAAGATTAGTACAGGAAACAGGCTTGCAACTAAAACAGATAAACAAT
rJMSF013E11+          GAGGAAGACAAAGCAAGATTAGTACAGGAAACAGGCTTGCAACTAAAACAGATAAACAAT
                      ____________________________________________________________
consensus             GAGGAAGACAAAGCAAGATTAGTACAGGAAACAGGCTTGCAACTAAAACAGATAAACAAT
 
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JMFN005O05-           TGGTTCATCAACCAAAGGAAAAGAAACTGGCACAGCAATCCTTCATCATCGACATCCCAG
rJMSF013E11+          TGGTTCATCAACCAAAGGAAAAGAAACTGGCACAGCAATCCTTCATCATCGACATCCCAG
                      ____________________________________________________________
consensus             TGGTTCATCAACCAAAGGAAAAGAAACTGGCACAGCAATCCTTCATCATCGACATCCCAG
 
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rJMSF024K16+                         AGCGGTAGTGCAGGAGAAAAGATGAGCAGTGAGCACTTCATCTGA
JMFN005O05-           AAAAGCAAACGCAAGAGCGGTAGTGCAGGAGAAAAGATGAGCAGTGAGCACTTCATCTGA
rJMSF013E11+          AAAAGCAAACGCAAGAGCGGTAGTGCAGGAGAAAAGATGAGCAGTGAGCACTTCATCTGA
                      ____________________________________________________________
consensus             AAAAGCAAACGCAAGAGCGGTAGTGCAGGAGAAAAGATGAGCAGTGAGCACTTCATCTGA
 
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rJMSF024K16+          GGAGCAGAAGTTGTATAGTGGCAATCCCATCATTATTCCCAGCATCACAGTACACACATA
JMFN005O05-           GGAGCAGAAGTTGTATAGTGGCAATCCCATCATTATTCCCAGCATCACAGTACACACATA
rJMSF013E11+          GGAGCAGAAGTTGTATAGTGGCAATCCCATCATTATTCCCAGCATCACAGTACACACATA
                      ____________________________________________________________
consensus             GGAGCAGAAGTTGTATAGTGGCAATCCCATCATTATTCCCAGCATCACAGTACACACATA
 
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rJMSF024K16+          GTTAGCACGTGAAACGAGAATGGAGCTCTCTGGCGCACACAGAAGTTTTGGCCACTAGAC
JMFN005O05-           GTTAGCACGTGAAACGAGAATGGAGCTCTCTGGCGCACACAGAAGTTTTGGCCACTAGAC
rJMCP002D02-                                                                CTAGAC
rJMSF013E11+          GTTAGCACGTGAAACGAGAATGGAGCTCTCTGGCGCACACAGAAGTTTTGGCCACTAGAC
                      ____________________________________________________________
consensus             GTTAGCACGTGAAACGAGAATGGAGCTCTCTGGCGCACACAGAAGTTTTGGCCACTAGAC
 
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rJMSF024K16+          TGCCGGTGTGGGAGACTTATCAGATCCACTTAGACTAGTTAGAATATGCTTTTGAATATA
JMFN005O05-           TGCCGGTGTGGGAGACTTATCAGATCCACTTAGACTAGTTAGAATATGCTTTTGAATATA
rJMCP002D02-          TGCCGGTGTGGGAGACTTATCAGATCCACTTAGACTAGTTAGAATACGCTTTTGAATATA
rJMSF013E11+          TGCCGGTGTGGGAGACTTATCAGATCCACTTAGACTAGTTAGAATATGCTTTTGAATATA
                      ____________________________________________________________
consensus             TGCCGGTGTGGGAGACTTATCAGATCCACTTAGACTAGTTAGAATATGCTTTTGAATATA
 
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rJMSF024K16+          ATGTGGCTTACATATTTAAGCAGCAGTGCATATTTTGTTACTTGTTTTTTATTTTTTTTG
JMFN005O05-           ATGTGGCTTACATATTTAAGCAGCAGTGCATATTTTGTTACTTGTTTTTTATTTTTTTTG
rJMCP002D02-          ATGTGGCTTACATATTTAAGCAGCAGTGCATATTTTGTTACTTGTTTTTTATTTTTTTTG
rJMSF013E11+          ATGTGGCTTACATATTTAAGCAGCAGTGCATATTTTGTTACTTGTTTTTTATTTTTTTTG
                      ____________________________________________________________
consensus             ATGTGGCTTACATATTTAAGCAGCAGTGCATATTTTGTTACTTGTTTTTTATTTTTTTTG
 
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rJMSF024K16+          GCGAGNTTCATCAATGTTTAGCATCTAT                                
JMFN005O05-           GCGAGGTTCATCAATGTTTAGCATCTATATATAATGTCTATACTTCGAT           
rJMCP002D02-          GCGAGGTTCATCAATGTTTAGCATCTATATATAATGTCTATACTTCGATCTTACCAACGT
rJMSF013E11+          GCGAGGTTCATCAATGTTTAGCATCTATATATAATGTCTATACTTCGATCTTACCAACGT
                      ____________________________________________________________
consensus             GCGAGGTTCATCAATGTTTAGCATCTATATATAATGTCTATACTTCGATCTTACCAACGT
 
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rJMCP002D02-          ATCAATGCTTTGTAAGTTTCACCTTTTAAATTTTTGTGAATATAAGTGGCTGTTGATT  
rJMSF013E11+          ATCAATGCTTTGTAAGTTTCACCTTTTAAATTTTTGTGAATATAAGTGGCTGTTGATTAT
                      ____________________________________________________________
consensus             ATCAATGCTTTGTAAGTTTCACCTTTTAAATTTTTGTGAATATAAGTGGCTGTTGATTAT
 
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rJMSF013E11+          GGTTAGGATTTAGAATAGAAGTCAGAAGATGATATTTCTAGATGGCAACGTCAAGGTTGT
                      ____________________________________________________________
consensus             GGTTAGGATTTAGAATAGAAGTCAGAAGATGATATTTCTAGATGGCAACGTCAAGGTTGT