| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF009E10 | Sequence | 465 | 013283 (7) | emb|CDP22009.1| | 1e-66 | unnamed protein product, partial [Coffea canephora] | 781 | 013909 (4) | ref|XP_006483058.1| | 3e-80 | PREDICTED: probable inactive purple acid phosphatase 2-like [Citrus sinensis] |
| JMSF011P15 | Sequence | 197 | 013283 (7) | 761 | 013909 (4) | ref|XP_006483058.1| | 1e-55 | PREDICTED: probable inactive purple acid phosphatase 2-like [Citrus sinensis] | |||
| JMSF015N16 | Sequence | 438 | 013283 (7) | emb|CDP22009.1| | 2e-60 | unnamed protein product, partial [Coffea canephora] | 814 | 013909 (4) | ref|XP_006483058.1| | 5e-84 | PREDICTED: probable inactive purple acid phosphatase 2-like [Citrus sinensis] |
| JMSF028N10 | Sequence | 686 | 013283 (7) | emb|CDP22009.1| | 6e-117 | unnamed protein product, partial [Coffea canephora] | 763 | 013909 (4) | ref|XP_006483058.1| | 6e-58 | PREDICTED: probable inactive purple acid phosphatase 2-like [Citrus sinensis] |
This contig is upended
. : . : . : . : . : . :
rJMSF009E10+ CAGAAAATGGTTGAGCACCTAGAACCTCT
rJMSF015N16+ AGAGATGCCCCTACTAGGCAGAAAATGGTTGAGCACCTAGAACCTCT
____________________________________________________________
consensus AGAGATGCCCCTACTAGGCAGAAAATGGTTGAGCACCTAGAACCTCT
. : . : . : . : . : . :
rJMSF009E10+ TCTTGTCAATAACAATGTAACTCTTGCATTGTGGGGTCATGTACACAGGTACGAGAGGTT
rJMSF028N10+ TCTTGTCAATAACAATGTAACTCTTGCATTGT-GGGTCATGTACACAGGTACGAGAGGTT
rJMSF015N16+ TCTTGTCAATAACAATGTAACTCTTGCATTGTGGGGTCATGTACACAGGTACGAGAGGTT
rJMSF011P15+ GGGTCATGTACACAGGTACGAGAGGTT
____________________________________________________________
consensus TCTTGTCAATAACAATGTAACTCTTGCATTGTGGGGTCATGTACACAGGTACGAGAGGTT
. : . : . : . : . : . :
rJMSF009E10+ CTGCCCGATGAACAACTTCGCTTGTGGAAGCCTAGGGTTGAATGGGGGGCAGGC-TTTCC
rJMSF028N10+ CTGCCCGATGAACAACTTCGCTTGTGGAAGCCTAGGGTTGAATGGGGGGCAGGC-TTTCC
rJMSF015N16+ CTGCCCGATGAACAACTTCGCTTGTGGAAGCCTAGGGTTGAATGGGGGGCAGGC-TTTCC
rJMSF011P15+ CTGCCCGATGAACAACTTCGCTTGTGGAAGCCTAGGGTTGAATGGGGGGCAGGCTTTTCC
____________________________________________________________
consensus CTGCCCGATGAACAACTTCGCTTGTGGAAGCCTAGGGTTGAATGGGGGGCAGGC-TTTCC
. : . : . : . : . : . :
rJMSF009E10+ CTGTACACGTCGTGATTGGGATGGCAGGACAGGAATGGCAGCCCATCTGGGAACCTAGAC
rJMSF028N10+ CTGTACACGTCGTGATTGGGATGGCAGGACAGGAATGGCAGCCCATCTGGGAACCTAGAC
rJMSF015N16+ CTGTACACGTCGTGATTGGGATGGCAGGACAGGAATGGCAGCCCATCTGGGAACCTAGAC
rJMSF011P15+ CTGTACACGTCGTGATTGGGATGGCAGGACAGGAATGGCAGCCCATCTGGGAACCTAGAC
____________________________________________________________
consensus CTGTACACGTCGTGATTGGGATGGCAGGACAGGAATGGCAGCCCATCTGGGAACCTAGAC
. : . : . : . : . : . :
rJMSF009E10+ CAACCCACCCCGACCTCCCCATTTTCCCACAGCCCGCTCGGTCCCTGTACCGTGGGGGTG
rJMSF028N10+ CAACCCACCCCGACCTCCCCATTTTCCCACAGCCCGCTCGGTCCCTGTACCGTGGGGGTG
rJMSF015N16+ CAACCCACCCCGACCTCCCCATTTTCCCACAGCCCGCTCGGTCCCTGTACCGTGGGGGTG
rJMSF011P15+ CAACCCACCCCCACCTCCCCATTTTCCCACAGCCCGCTCGGTCCCTGTACCGTGGGGGTG
____________________________________________________________
consensus CAACCCACCCCGACCTCCCCATTTTCCCACAGCCCGCTCGGTCCCTGTACCGTGGGGGTG
. : . : . : . : . : . :
rJMSF009E10+ AATTCGGTTACACAAAACTCGTTGCAACAAAGGAGAAACTAGTATTTTCTTATATTGGAA
rJMSF028N10+ AATTCGGTTACACAAAACTCGTTGCAACAAAGGAGAAACTAGTATTTTCTTATATTGGAA
rJMSF015N16+ AATTCGGTTACACAAAACTCGTTGCAACAAAGGAGAAACTAGTATTTTCTTATATTGGAA
rJMSF011P15+ AATTCGGTTACACAAAACTCGTTGCAACAAAGGAGAAACTAGTATTTTCTTATATTGGAA
____________________________________________________________
consensus AATTCGGTTACACAAAACTCGTTGCAACAAAGGAGAAACTAGTATTTTCTTATATTGGAA
. : . : . : . : . : . :
rJMSF009E10+ ATCACGACGGTGAGGTGCATGATGTAGTAGAAATCCTGGCTTCAGGTCAAGTTCTTAATG
rJMSF028N10+ ATCACGACGGTGAGGTGCATGATGTAGTAGAAATCCTGGCTTCAGGTCAAGTTCTTAATG
rJMSF015N16+ ATCACGACGGTGAGGTGCATGATGTAGTAGAAATCCTGGCTTCAGGTCAAGTTCTTAATG
rJMSF011P15+ ATCACGACGGTGAGGTGCATGATGTAGCAGAAATCCTGGCTTCAGGTCAAGTTCTTAATG
____________________________________________________________
consensus ATCACGACGGTGAGGTGCATGATGTAGTAGAAATCCTGGCTTCAGGTCAAGTTCTTAATG
. : . : . : . : . : . :
rJMSF009E10+ GTGAGGGTGGCGGAGAAAATAACAAAGTCAAAGAACAAGAGGAGCTTAAGGCAAGAGGTG
rJMSF028N10+ GTGAGGGTGGCGGAGAAAATAACAAAGTCAAAGAACAAGA-GAGCTTAAGGCAAGAGGTG
rJMSF015N16+ GTGAGGGTGGCGGAGAAAATAACAAAGTCAAAGAACAAGAGGAGCTTAAGGCAAGAGGTG
rJMSF011P15+ GTGAGGGTGGCGGAGAAAATAACAAAGTCAAAGAACAAGAGGAGCTTAAGGCAAGAGGTG
____________________________________________________________
consensus GTGAGGGTGGCGGAGAAAATAACAAAGTCAAAGAACAAGAGGAGCTTAAGGCAAGAGGTG
. : . : . : . : . : . :
rJMSF009E10+ AGCCCGAGCCTGAGCCTGAGGCGAGAAAACAGACTGATCCGACATTAACATGGCTTGCAA
rJMSF028N10+ AGCCCGAGCCTGAGCCTGAGGCGAGAAAACAGACTGATCCGACATTAACATGGCTTGCAA
rJMSF015N16+ AGCCCGAGCCTGAGCCTGAGGCGAGAAAACAGACTGATCCGACATTAACATGGCTTGCAA
rJMSF011P15+ AGCCCGAGCCTGAGCCTGAGGCGAGAAAACAGACTGATCCGACATTAACATGGCTTGCAA
____________________________________________________________
consensus AGCCCGAGCCTGAGCCTGAGGCGAGAAAACAGACTGATCCGACATTAACATGGCTTGCAA
. : . : . : . : . : . :
rJMSF009E10+ AAGATGCCGGTTTACTAGTGCTTGGAATTGTGATTGGTTATGTTATCGGGTACAAATCGC
rJMSF028N10+ AAGATGCCGGTTTACTAGTGCTTGGAATTGTGATTGGTTATGTTATCGGGTACAAATCGC
rJMSF015N16+ AAGATGCCGGTTTACTAGTGCTTGGAATTGTGATTGGTTATGTTATCGGGTACAAATCGC
rJMSF011P15+ AAGATGCCGGTTTACTAGTGCTTGGAATTGTGATTGGTTATGTTATCGGGTACAAATCGC
____________________________________________________________
consensus AAGATGCCGGTTTACTAGTGCTTGGAATTGTGATTGGTTATGTTATCGGGTACAAATCGC
. : . : . : . : . : . :
rJMSF009E10+ ATGCTAGGAAAGATGCCACACTGGGTAATAATTGGACTCCTATAAAGAATGAGGATTTGT
rJMSF028N10+ ATGCTAGGAAAGATGCCACACTGGGTAATAATTGGACTCCTATAAAGAATGAGGATTTGT
rJMSF015N16+ ATGCTAGGAAAGATGCCACACTGGGTAATAATTGGACTCCTATAAAGAATGAGGATTTGT
rJMSF011P15+ ATGCTAGGAAAGATGCCACACTGGGTAATAATTGGACTCCTATAAAGAATGAGGATTTGT
____________________________________________________________
consensus ATGCTAGGAAAGATGCCACACTGGGTAATAATTGGACTCCTATAAAGAATGAGGATTTGT
. : . : . : . : . : . :
rJMSF009E10+ GATTTATGAGTTTTGGATTCTGTTCTGGCATGGGACAAATCTGGCAATTGTGTTCACTCA
rJMSF028N10+ GATTTATGAGTTTTGGATTCTGTTCTGGCATGGGACAAATCTGGCAATTGTGTTCACTCA
rJMSF015N16+ GATTTATGAGTTTTGGATTCTGTTCTGGCATGGGACAAATCTGGCAATTGTGTTCACTCA
rJMSF011P15+ GATTTATGAGTTTTGGATTCTGTTCTGGCATGGGACAAATCTGGCAATTGTGTTCACTCA
____________________________________________________________
consensus GATTTATGAGTTTTGGATTCTGTTCTGGCATGGGACAAATCTGGCAATTGTGTTCACTCA
. : . : . : . : . : . :
rJMSF009E10+ GCGCAGTACTATATTGCTATGTAGAGTTGTAAATATACACATCACATTGTAATTTTCTTG
rJMSF028N10+ GCGCCGTACTATATTGCTATGTAGAGTTGTAAATATACACATCACATTGTAATTTTCTTG
rJMSF015N16+ GCGCAGTACTATATTGCTATGTAGAGTTGTAAATATACACATCACATTGTAATTTTCTTG
rJMSF011P15+ GCGCAGTACTATATTGCTATGTAGAGTTGTAAATATACACATCACATTGTAATTTTCTTG
____________________________________________________________
consensus GCGCAGTACTATATTGCTATGTAGAGTTGTAAATATACACATCACATTGTAATTTTCTTG
. : . : . : . : . : . :
rJMSF009E10+ TAGCAGTTGAGGTGAAAGCTGAAGCTCATC
rJMSF028N10+ TAGCAGTTGAGGTGAAAGCTGAAGCTCATC
rJMSF015N16+ TAGCAGTTGAGGTGAAAGCTGAAGCTCATC
rJMSF011P15+ TAGCAGTTGAGGTGAAAGCTGAAGCTCATCATGTGTACCAAACCATTACTTTCTTATACT
____________________________________________________________
consensus TAGCAGTTGAGGTGAAAGCTGAAGCTCATCATGTGTACCAAACCATTACTTTCTTATACT