| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS028A10 | Sequence | 574 | 013903 (4) | ref|XP_006350593.1| | 4e-27 | PREDICTED: cytochrome c oxidase assembly protein COX16 homolog, mitochondrial-l | |||||
| JMSF007G20 | Sequence | 331 | 013903 (4) | ref|XP_006350593.1| | 1e-31 | PREDICTED: cytochrome c oxidase assembly protein COX16 homolog, mitochondrial-l | 744 | 013903 (4) | ref|XP_006350593.1| | 3e-60 | PREDICTED: cytochrome c oxidase assembly protein COX16 homolog, mitochondrial-l |
| JMSF010B23 | Sequence | 301 | 008834 (4) | 670 | 013903 (4) | ref|NP_001239805.1| | 2e-31 | uncharacterized protein LOC100814113 [Glycine max] gb|ACU17338.1| unknown [Glyci | |||
This contig is upended
. : . : . : . : . : . :
JMSF007G20- TAGATAACCGCCATTTGCTAAGCGCA
rJMSF007G20+ TAGATAACCGCCATTTGCTAAGCGCA
____________________________________________________________
consensus TAGATAACCGCCATTTGCTAAGCGCA
. : . : . : . : . : . :
JMSF007G20- GACAGAGAAACAATGAGCAGTAATACGGTGCCGTTTCGCATCTAAGGACATCCAAAGTTA
rJMSF007G20+ GACAGAGAAACAATGAGCAGTAATACGGTGCCGTTTCGCATCTAAGGACATCCAAAGTTA
____________________________________________________________
consensus GACAGAGAAACAATGAGCAGTAATACGGTGCCGTTTCGCATCTAAGGACATCCAAAGTTA
. : . : . : . : . : . :
JMSF007G20- GACAATGGCTCAAGTAACAATGGATCCTTCTAAAAAAGTTGATGACAATGTTGCTTCCTC
JMFS028A10- TCAAGTCACAATGGATCCTTCTAAACAAGTTGATGACAATGTTGCTTCCTC
rJMSF007G20+ GACAATGGCTCAAGTAACAATGGATCCTTCTAAAAAAGTTGATGACAATGTTGCTTCCTC
____________________________________________________________
consensus GACAATGGCTCAAGTAACAATGGATCCTTCTAAAAAAGTTGATGACAATGTTGCTTCCTC
. : . : . : . : . : . :
JMSF007G20- TACTTACAAATCTCAAAATTCAGCATCATCATTCAAAAGGTTGGGCAGGAAATCACCATT
JMFS028A10- TACTTACAAATATCAAAATTCACCCTTATCATTCAAAAGGTTGGGCAGGAAATCACCATT
rJMSF007G20+ TACTTACAAATCTCAAAATTCAGCATCATCATTCAAAAGGTTGGGCAGGAAATCACCATT
____________________________________________________________
consensus TACTTACAAATCTCAAAATTCAGCATCATCATTCAAAAGGTTGGGCAGGAAATCACCATT
. : . : . : . : . : . :
JMSF007G20- CACTAGATATGGACTTCCTATGATCTCACTAATGGTGCTTGGGT-CTTTTGGCCTTGGCC
JMFS028A10- CACTAAATATGGACTTCCTATGATCTCACTAATGGTGCTTGGGTACTTTTGGCCTTGGCC
rJMSF007G20+ CACTAGATATGGACTTCCTATGATCTCACTAATGGTGCTTGGGT-CTTTTGGCCTTGGCC
____________________________________________________________
consensus CACTAGATATGGACTTCCTATGATCTCACTAATGGTGCTTGGGT-CTTTTGGCCTTGGCC
. : . : . : . : . : . :
JMSF007G20- ATCTTCTGCAAGGCAGCAAGGATATTGCTAAAGTGA
JMFS028A10- ATCTTCTGCAAAGCAACACGGATATTGCTAAAGTGATATGATGATCGACAGTGGGATATC
rJMSF007G20+ ATCTTCTGCAAGGCAGCAAGGATATTGCTAAAGTGA-AGGATGATCGTGAGTGGGAGATC
rJMSF010B23+ GATGATCGTGAGTGGGAGATC
____________________________________________________________
consensus ATCTTCTGCAAGGCAGCAAGGATATTGCTAAAGTGATATGATGATCGTGAGTGGGAGATC
. : . : . : . : . : . :
JMFS028A10- ATTGAGACATGAAAAGCACTTTCTAACGAATGCCCTGTCAATGCATATAACCCCAAAAAG
rJMSF007G20+ ATTGAGACAAGAAAAGCACTTTCGAAAGAAGGGCCTGTCAATGCATATAACCCCAAAAAG
rJMSF010B23+ ATTGAGACAAGAAAAGCACTTTCGAAGGAAGGGCCTGTCAATGCATATAACCCCAAAAAG
____________________________________________________________
consensus ATTGAGACAAGAAAAGCACTTTCGAAGGAAGGGCCTGTCAATGCATATAACCCCAAAAAG
. : . : . : . : . : . :
JMFS028A10- ATAAGTTTGCAAGATGAGTTGAATGCTCTGCTACAAAAGGTTGATCTAAACACTTACGAA
rJMSF007G20+ ATAAGTTTGGAGGATGAGTTGAAGGCTCTGCAAGAAAAGGTTGATATAAACACTTACGAA
rJMSF010B23+ ATAAATTTGGAGGATGAGTTGAAGGCTCTGCAAGAGAAGGTTGATATAAACACTTACGAA
____________________________________________________________
consensus ATAAGTTTGGAGGATGAGTTGAAGGCTCTGCAAGAAAAGGTTGATATAAACACTTACGAA
. : . : . : . : . : . :
JMFS028A10- TACAAGAGAATTCCTAAGCCCAATGACGGCAAATGAAAAGGCAGCATTTTCCTGA
rJMSF007G20+ TACAAGAGAATTCCTAAGCCCAATGAGGGCAAATGAAAAGGCAGCATTTTTCTGAGGCC
rJMSF010B23+ TACAAGAGAATTCCTAAGCCCAATGAGGGCAAATGAAAAGGCAGCATTTTTCTGAGGCCT
____________________________________________________________
consensus TACAAGAGAATTCCTAAGCCCAATGAGGGCAAATGAAAAGGCAGCATTTTTCTGAGGCCT
. : . : . : . : . : . :
rJMSF010B23+ TGACCATCAGGTAACAATATTATACTTGCAACTGGGTTCTTTTCCCTTGGGTCTTCCATT
____________________________________________________________
consensus TGACCATCAGGTAACAATATTATACTTGCAACTGGGTTCTTTTCCCTTGGGTCTTCCATT
. : . : . : . : . : . :
rJMSF010B23+ ATCTTGGCACCCTTTCTCAAGCCTTTGTTCCACCATTTGCAACCAAAGAGTTGATAGCTT
____________________________________________________________
consensus ATCTTGGCACCCTTTCTCAAGCCTTTGTTCCACCATTTGCAACCAAAGAGTTGATAGCTT
. : . : . : . : . : . :
rJMSF010B23+ GGAGTGCCTCATGCCGTCCGGTTTCAGACATCCTTCGAAGGGGGAAAAGACGGCGTGCTG
____________________________________________________________
consensus GGAGTGCCTCATGCCGTCCGGTTTCAGACATCCTTCGAAGGGGGAAAAGACGGCGTGCTG
. : . : . : . : . : . :
rJMSF010B23+ GTGAAGAAAAGGCAATGACTGCGAGCCCAAACATATTGAGCACATCTTCTGAAATTTGAA
____________________________________________________________
consensus GTGAAGAAAAGGCAATGACTGCGAGCCCAAACATATTGAGCACATCTTCTGAAATTTGAA
. : . : . : . : . : . :
rJMSF010B23+ CCCAAACAAATCAATTTACAAAGTGCCAAAAATTCTACATTCTATTTCTAGATGTGCTAT
____________________________________________________________
consensus CCCAAACAAATCAATTTACAAAGTGCCAAAAATTCTACATTCTATTTCTAGATGTGCTAT