Contig 013888:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN028P14Sequence622013888 (5)ref|XP_009628960.1|1e-83PREDICTED: scarecrow-like protein 22 [Nicotiana tomentosiformis]
JMSF007L04Sequence341001621 (4)767013888 (5)ref|XP_009343062.1|6e-74PREDICTED: scarecrow-like protein 6 [Pyrus x bretschneideri]
JMSF024L21Sequence346006036 (4)649013888 (5)ref|XP_009628960.1|7e-67PREDICTED: scarecrow-like protein 22 [Nicotiana tomentosiformis]
JMSF036K16Sequence410006036 (4)111013888 (5)ref|XP_010941132.1|2e-09PREDICTED: scarecrow-like protein 27 [Elaeis guineensis]
JMSF047C02Sequence171006036 (4)638013888 (5)ref|XP_009343062.1|1e-59PREDICTED: scarecrow-like protein 6 [Pyrus x bretschneideri]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN028P14- GAGGTCGTAAACTTGGATACATTTGATCCCAGTTCTTATCAGTTGTC
                      ____________________________________________________________
consensus GAGGTCGTAAACTTGGATACATTTGATCCCAGTTCTTATCAGTTGTC
 
. : . : . : . : . : . :
JMFN028P14- CTCTTTCCGACCATCCGGGAGCGAGGTAGTCGCTGTGAATTTCCCCATTTAGTCCCTTTC
rJMSF047C02+ TCCGACCATCCGGGAGCGAGGTAGTCGCTGTGAATTTCCCCATTTGGTCCCTTTC
rJMSF024L21+ TC
rJMSF007L04+ TCCGGGAGCGAGGTAGTCGCTGTGAATTTCCCCATTTGGTCCNTTTC
                      ____________________________________________________________
consensus CTCTTTCCGACCATCCGGGAGCGAGGTAGTCGCTGTGAATTTCCCCATTTGGTCCCTTTC
 
. : . : . : . : . : . :
JMFN028P14- AAACCATCTCTCCGCTCTTCCTTCACTGCTTCATTACATAAAGCAGCTCTCGCCAAAAAT
rJMSF047C02+ AAACCATCTCTCCGNTCTTCCTTCACTGCTTCATTACATAAAGCAGCTCTCGCCAAAAAT
rJMSF024L21+ AAACCATCTCTCCGCTCTTCCTTCACTGCTTCATTACATAAAGCAGCTCTCGCCAAAAAT
rJMSF007L04+ AAACCATCTCTCCGCTCTTCCTTCACTGCTTCATTACATAAAGCAGCTCTCGCCAAAAAT
                      ____________________________________________________________
consensus AAACCATCTCTCCGCTCTTCCTTCACTGCTTCATTACATAAAGCAGCTCTCGCCAAAAAT
 
. : . : . : . : . : . :
JMFN028P14- CGTAGTTTCACTGGAACGAGGATGCGAACGAACTGAACTTCCTTTCGCTCACCACATTCT
rJMSF047C02+ CGTAGTTTCACTGGAACGAGGATGCGAACGAACTGAACTTCCTTTCGCTCACCACATTCT
rJMSF024L21+ CGTAGTTTCACTGGAACGAGGATGCGAACGAACTGAACTTCCTTTCGCTCACCACATTCT
rJMSF007L04+ CGTAGTTTCACTGGAACGAGGATGCGAACGAACTGAACTTCCTTTCGCTCACCACATTCT
                      ____________________________________________________________
consensus CGTAGTTTCACTGGAACGAGGATGCGAACGAACTGAACTTCCTTTCGCTCACCACATTCT
 
. : . : . : . : . : . :
JMFN028P14- CAATGCCCTAAAATACTACGAGGTCCTCTTCGAGAGTATGGGTGCTGCAAAGGTGACTCC
rJMSF047C02+ CAATGCCCTAAAATANTACGAGGTCCTCTTCGAGAGTATGGGTGCTGCAAAGGTGACTCC
rJMSF024L21+ CAATGCCCTAAAATACTACGAGGTCCTCTTCGAGAGTATGGGTGCTGCAAAGGTGACTCC
rJMSF007L04+ CAATGCCCTAAAATACTACGAGGTCCTCTTCGAGAGTATGGGTGCTGCAAAGGTGACTCC
                      ____________________________________________________________
consensus CAATGCCCTAAAATACTACGAGGTCCTCTTCGAGAGTATGGGTGCTGCAAAGGTGACTCC
 
. : . : . : . : . : . :
JMFN028P14- CGACATGGCAAACAAGATGGAGAGGTTCCTCTTCCAGCCTAGCATCGAGAGCATCGTGCA
rJMSF047C02+ CGACATGGCAAACAAGATGGAGAGGTTCCTCTTCCAGCCTAGCATCGAGAGCATCGTGCA
rJMSF024L21+ CGACATGGCAAACAAGATGGAGAGGTTCCTCTTCCAGCCTAGCATCGAGAGCATCGTGCA
rJMSF007L04+ CGACATGGCAAACAAGATGGAGAGGTTCCTCTTCCAGCCTAGCATCGAGAGCATCGTGCA
                      ____________________________________________________________
consensus CGACATGGCAAACAAGATGGAGAGGTTCCTCTTCCAGCCTAGCATCGAGAGCATCGTGCA
 
. : . : . : . : . : . :
rJMSF036K16+ TCAGCTGG
JMFN028P14- AGGGCGCCTCTGTTTCCCCGATCAAATGCCCCCATGGAGAACCCTGTTTACTTCAGCTGG
rJMSF047C02+ AGGGCGCCTCTGTTTCCCCGATCAAATGCCCCCATGGAGAACCCTGTTTACTTCAGCTGG
rJMSF024L21+ AGGGCGCCTCTGTTTCCCCGATCAAATGCCCCCATGGAGAACCCTGTTTACTTCAGCTGG
rJMSF007L04+ AGGGCGCCTCTGTTTCCCCGATCAAATGCCCCCATGGAGAACCCTGTTTACTTCAGCTGG
                      ____________________________________________________________
consensus AGGGCGCCTCTGTTTCCCCGATCAAATGCCCCCATGGAGAACCCTGTTTACTTCAGCTGG
 
. : . : . : . : . : . :
rJMSF036K16+ CTTTCTACCCGNGGCNTTCAGTAATTTCACCGANACTCNAGCCGAGTGCNTCANGAAGCG
JMFN028P14- CTTTCTACCCGTGGCATTCAGTAATTTCACCGAAACTCAAGCCGAGTGCATCATGAAGCG
rJMSF047C02+ CTTTCTACCNGTGGCATTCNGTAATTTCACNGAAACTCAAGCCGANTGCATCATGAAGCG
rJMSF024L21+ CTTTCTACCCGTGGCATTCAGTAATTTCACCGAAACTCAAGCCGAGTGCATCATGAAGCG
rJMSF007L04+ CTTTCTACCCGTGGCATTCAGTAATTTCACCGAAACTCAAGCCGAGTGCATCATGAAGCG
                      ____________________________________________________________
consensus CTTTCTACCCGTGGCATTCAGTAATTTCACCGAAACTCAAGCCGAGTGCATCATGAAGCG
 
. : . : . : . : . : . :
rJMSF036K16+ AAATCAAGTTCGAGGGTTTCACGTGGAGAAGAGGCAGGCATCG
JMFN028P14- AAATCAAGTTCGAGGGTTTCACGTGGAGAAGAGGCAGGCATCGCTCGTGCTGTGCTGGCA
rJMSF047C02+ AAATCAAGTTCGAGGGTTTCACGTGGAGAAGAGGCAGGCNTCGCTCGNGCTNTGNNGGCA
rJMSF024L21+ AAATCAAGTTCGAGGGTTTCACGTGGAGAAGAGGCAGGCATCGCTCGTGCTGTGCTGGCA
rJMSF007L04+ AAATCAAGTTCGAGGGTTTCACGTGGAGAAGAGGCAGGCATCGCTCGTGCTGTGCTGGCA
                      ____________________________________________________________
consensus AAATCAAGTTCGAGGGTTTCACGTGGAGAAGAGGCAGGCATCGCTCGTGCTGTGCTGGCA
 
. : . : . : . : . : . :
JMFN028P14- ACGCCGAGAGTTGTTGACCGCCATGGCTTGGAGGTGTTGATCGATGTAGCTTCGTTTCGT
rJMSF047C02+ ACGCCGAGAGTTGTNGACCNCCATGGCTNGGAGGTGTNGATCGATGTAGCTTCGTTTNGT
rJMSF024L21+ ACGCCGAGAGTTGTTGACCGCCATGGCTTGGAGGTGTTNATCGATGTAGNTTCGTTTCGT
rJMSF007L04+ ACGCCGAGAGTTGTTGACCGCCATGGCTTGGAGGTGTTGATCGATGTAGCTTCGTTTCGT
                      ____________________________________________________________
consensus ACGCCGAGAGTTGTTGACCGCCATGGCTTGGAGGTGTTGATCGATGTAGCTTCGTTTCGT
 
. : . : . : . : . : . :
JMFN028P14- CAAAGCTGGAAACAGCGGTTTAACTAAATATGTTG
rJMSF047C02+ CAAAGCNGGAAACAGCGGTTTAACTAAATATGTTGTTTCATAGCAATTAATAAAATCTNA
rJMSF024L21+ CAAAGCTGGAAACAGCGGTTTAACTAAATATGTTGTTTCATAGCAATTAATAAAATCTTA
rJMSF007L04+ CAAAGCTGGAAACAGCGGTTTAACTAAATATGTTGTTTCATAGCAATTAATAAAATCTTA
                      ____________________________________________________________
consensus CAAAGCTGGAAACAGCGGTTTAACTAAATATGTTGTTTCATAGCAATTAATAAAATCTTA
 
. : . : . : . : . : . :
rJMSF047C02+ AAACTCGTTGCATCTCTGAGTGCTGCTGNGATGTTTCTAGTTT
rJMSF024L21+ AAACTCGTTGCATCTCTGAGTGCTGCTGTGATGTNTCTAGTTTGNTACTATCTAAGTAGT
rJMSF007L04+ AAACTCGTTGCATCTCTGAGTGCTGCTGTGATGTTTCTAGTTTGCTACTATCTAAGTAGT
                      ____________________________________________________________
consensus AAACTCGTTGCATCTCTGAGTGCTGCTGTGATGTTTCTAGTTTGCTACTATCTAAGTAGT
 
. : . : . : . : . : . :
rJMSF024L21+ ATTTTGACCGTAGACAGATANTCTTGTCGAAAACNGAATGTTTTCCT
rJMSF007L04+ ATTTTGACCGTAGACAGATATTCTTGTCGAAAACTGAATGTTTTCCTTGTGGCATGAGCT
                      ____________________________________________________________
consensus ATTTTGACCGTAGACAGATATTCTTGTCGAAAACTGAATGTTTTCCTTGTGGCATGAGCT
 
. : . : . : . : . : . :
rJMSF007L04+ ATTTGGACATCTTTGTTATGTACTATTATTGCCTAGTATTAGTTGTAACCAAGTTGCTGC
                      ____________________________________________________________
consensus ATTTGGACATCTTTGTTATGTACTATTATTGCCTAGTATTAGTTGTAACCAAGTTGCTGC