Contig 013869:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF045A04+                                                         TCAAGACCATGTA
JMFN009N10-                              GAAGAGCCGCAGAGGAGCTTGTCTTTGGTCAAGACCATGTA
                      ____________________________________________________________
consensus                                GAAGAGCCGCAGAGGAGCTTGTCTTTGGTCAAGACCATGTA
 
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rJMSF045A04+          ACAACTGGAGCTAGTAGTGATCTTCACACTGCTACTGAATTGGCCCAATACATGGTATTG
JMFN009N10-           ACAACTGGAGCTAGTAGTGATCTTCACACTGCTACTGAATTGGCCCAATACATGGTATCG
                      ____________________________________________________________
consensus             ACAACTGGAGCTAGTAGTGATCTTCACACTGCTACTGAATTGGCCCAATACATGGTATTG
 
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rJMSF045A04+          AATTGTGGGATGAGTGACACAATTGGNCCAATTCATATCAAAGAACGGCCAAGTGCGGAA
JMFN009N10-           AATTGTGGGATGAGTGACACAATTGGACCAATTCATATCAAAGAGCGGCCAAGTGCGGAA
                      ____________________________________________________________
consensus             AATTGTGGGATGAGTGACACAATTGGACCAATTCATATCAAAGAGCGGCCAAGTGCGGAA
 
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rJMSF045A04+          TTGCAATCACGCATTGATGCCGAAGTGGTTAAACTCCTCAGAGAAGCTTATGATCGAGTA
JMFN009N10-           TTGCAATCACGCATTGATGCCGAAGTGGTTAAACTCCTCAGAGAAGCTTATGATCGAGTA
rJMFF051M05+                              CGAAGTGGTTAAACTCCTCAGAGAAGCTTATGATCGAGTA
                      ____________________________________________________________
consensus             TTGCAATCACGCATTGATGCCGAAGTGGTTAAACTCCTCAGAGAAGCTTATGATCGAGTA
 
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rJMSF045A04+          AAGAACCTGCTAAAGAAGCATGAGTTGGCATTACATACTCTGGCCAATGCACTTATCGAG
JMFN009N10-           AAGAACCTGCTAAAGAAGCATGAGTTGGCATTACATACTCTGGCCAATGCACTTATCGAG
rJMFF051M05+          AAGAACCTGCTAAAGAAGCATGAGTTGGCATTACATACTCTGGCCAATGCACTTATCGAG
                      ____________________________________________________________
consensus             AAGAACCTGCTAAAGAAGCATGAGTTGGCATTACATACTCTGGCCAATGCACTTATCGAG
 
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rJMSF045A04+          TACGAGACATTAAGCGCAGAAGAAATCAAGCGCATTNTTCATCCCTATNGTGAAGGTAGG
JMFN009N10-           TACGAGACATTAAGCGCAGAAGAAATCAAGCGCATTCTTCATCCCTATCGTGAAGGTAGG
rJMFF051M05+          TACGAGACATTAAGCGCAGAAGAAATCAAGCGCATTCTTCATCCCTATCGTGAAGGTAGG
                      ____________________________________________________________
consensus             TACGAGACATTAAGCGCAGAAGAAATCAAGCGCATTCTTCATCCCTATCGTGAAGGTAGG
 
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rJMSF045A04+          CTCTCTGAACAACAGAGGCAGCAACAACAACAGGAGGAACTCGCATTGGTTTAGGTTTGG
JMFN009N10-           CTCTCTGAACAACAGAGGCAGCAACAACAACAGGAGGAACTCGCATTGGTTTAGGTTTGG
rJMFF051M05+          CTCTCTGAACAACAGAGGCAGCAACAACAACAGGAGGAACTCGCATTGGTTTAGGTTTGG
                      ____________________________________________________________
consensus             CTCTCTGAACAACAGAGGCAGCAACAACAACAGGAGGAACTCGCATTGGTTTAGGTTTGG
 
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rJMSF045A04+          CTCCAACTGTCTCAATTTGAATCCACATGATGTTGGATCTTCTCAGCTGCCACGGGGGGC
JMFN009N10-           CTCCAACTGTCTCAATTTGAATCCACATGATGTTGGATCTTCTCAGCTGCCA-GGGGGGC
rJMFF051M05+          CTCCAACTGTCTCAATTTGAATCCACATGATGTTGGATCTTCTCAGCTGCCA-GGGGGGC
                      ____________________________________________________________
consensus             CTCCAACTGTCTCAATTTGAATCCACATGATGTTGGATCTTCTCAGCTGCCA-GGGGGGC
 
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rJMSF045A04+          TCCGCGCAGTGCAAGCGAGGCAAATACANTAATTATTTTCAATTATATAATATATATATA
JMFN009N10-           TCCGCGCAGTGCAA-CGAGGCAAATACACTAATTATTTTCAATTATATAATATATATATA
rJMFF051M05+          TCCGCGCAGTGCAA-CGAGGCAAATACACTAATTATTTTCAATTATATAATATATATATA
                      ____________________________________________________________
consensus             TCCGCGCAGTGCAA-CGAGGCAAATACACTAATTATTTTCAATTATATAATATATATATA
 
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rJMSF045A04+          TTTTCTCAATTAATTTT                                           
JMFN009N10-           TTTTCTCAATTAATTTTATTTTCTTCTTTTGTAACATTATTCATAACAGTGGTAGTCCCT
rJMFF051M05+          TTTTCTCAATTAATTTTATTTTCTTCTTTTGTAACATTATTCATAACAGTGGTAGTCCCT
                      ____________________________________________________________
consensus             TTTTCTCAATTAATTTTATTTTCTTCTTTTGTAACATTATTCATAACAGTGGTAGTCCCT
 
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JMFN009N10-           TGGCAAGCAATATCTTCAAGTAGAAGACAGTACAGATCT                     
rJMFF051M05+          TGGCAAGCAATATCTTCAAGTAGAAGACAGTACAGATCTCTTAGCACTTAGTATTTTGCT
                      ____________________________________________________________
consensus             TGGCAAGCAATATCTTCAAGTAGAAGACAGTACAGATCTCTTAGCACTTAGTATTTTGCT
 
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rJMFF051M05+          CCATTTACAGCACCCTTATGGGTTAAATTTTGGAAAAAAAAAAAAAAAACTCTCCAGGGT
                      ____________________________________________________________
consensus             CCATTTACAGCACCCTTATGGGTTAAATTTTGGAAAAAAAAAAAAAAAACTCTCCAGGGT