Contig 013856:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF032J01Sequence548011652 (6)709013856 (3)ref|XP_009799464.1|1e-20PREDICTED: zinc finger CCCH domain-containing protein 31 [Nicotiana sylvestris]
JMFF050B13Sequence631011652 (6)640013856 (3)ref|XP_010259560.1|2e-11PREDICTED: zinc finger CCCH domain-containing protein 31 isoform X1 [Nelumbo nu
JMSF034A15Sequence684011652 (6)ref|XP_004243818.1|2e-77PREDICTED: putative pentatricopeptide repeat-containing protein At3g08820 [Sola708013856 (3)ref|XP_006348971.1|5e-94PREDICTED: putative pentatricopeptide repeat-containing protein At3g08820-like

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF034A15+ AGAACGCGATGAGACTTTTTGCCACGATGCTAGAGCTCAACCTGCAACC
                      ____________________________________________________________
consensus AGAACGCGATGAGACTTTTTGCCACGATGCTAGAGCTCAACCTGCAACC
 
. : . : . : . : . : . :
rJMSF034A15+ AAATGCAGGCACATTCCTCGGCATCCTATGTGCTTGCAGCCACTCAGGACTATTGCAGAA
                      ____________________________________________________________
consensus AAATGCAGGCACATTCCTCGGCATCCTATGTGCTTGCAGCCACTCAGGACTATTGCAGAA
 
. : . : . : . : . : . :
rJMSF034A15+ AGGCCGGGAGATGTTCAAGGAGATGAGCCAGCGCTTCTCCATTGCCCCGAAACTAGACCA
                      ____________________________________________________________
consensus AGGCCGGGAGATGTTCAAGGAGATGAGCCAGCGCTTCTCCATTGCCCCGAAACTAGACCA
 
. : . : . : . : . : . :
rJMSF034A15+ CTATGCTTGCTACATTGACCTCCTTGCTCGAACGGGTTGCATTGAAGAAGCGCTTGAAGT
                      ____________________________________________________________
consensus CTATGCTTGCTACATTGACCTCCTTGCTCGAACGGGTTGCATTGAAGAAGCGCTTGAAGT
 
. : . : . : . : . : . :
rJMSF034A15+ AGTTACCTCAATGCCTTTCGAACCAAACAATTTCGTGTGGGGGGCTCTGCTCGCTGGCTG
                      ____________________________________________________________
consensus AGTTACCTCAATGCCTTTCGAACCAAACAATTTCGTGTGGGGGGCTCTGCTCGCTGGCTG
 
. : . : . : . : . : . :
rJMSF034A15+ CCTGCTTCATAACAAACTAGAACTCGCCAATTTCATCTCTTCCATGCTTGTTCAGGTGGA
                      ____________________________________________________________
consensus CCTGCTTCATAACAAACTAGAACTCGCCAATTTCATCTCTTCCATGCTTGTTCAGGTGGA
 
. : . : . : . : . : . :
rJMSF034A15+ TCCACATAGCTCTGCTGGCTATGTGATGCTGTCCAATGCATTTGCCATAGATCATCATTG
                      ____________________________________________________________
consensus TCCACATAGCTCTGCTGGCTATGTGATGCTGTCCAATGCATTTGCCATAGATCATCATTG
 
. : . : . : . : . : . :
rJMSF034A15+ GAACAATGTTTCAGGGCTGAGATCTTCCATGAAGGAAAGCGGGGTAACTAAGCAGCCCGG
                      ____________________________________________________________
consensus GAACAATGTTTCAGGGCTGAGATCTTCCATGAAGGAAAGCGGGGTAACTAAGCAGCCCGG
 
. : . : . : . : . : . :
rJMSF034A15+ TTGTAGCTGGATCAACATTGAAGGAAATGTGCATGAATTCCTTGCAGGATCTGCAACAAA
rJMFF032J01+ TCTGCAACAAA
                      ____________________________________________________________
consensus TTGTAGCTGGATCAACATTGAAGGAAATGTGCATGAATTCCTTGCAGGATCTGCAACAAA
 
. : . : . : . : . : . :
rJMSF034A15+ TTTTCAAGATGGAAGAATACATGATGCACTTGAGGGATTACTGAAGGAGATGAAATTACC
rJMFF032J01+ TTTTCAAGATGGAATAATACATGATGCACTTGAGGGATTACTGAAGGAGATGAAATTACC
                      ____________________________________________________________
consensus TTTTCAAGATGGAATAATACATGATGCACTTGAGGGATTACTGAAGGAGATGAAATTACC
 
. : . : . : . : . : . :
rJMSF034A15+ AAGTGCATAGA
rJMFF032J01+ AAGTGCATAGAGAATTTGATAGATTTGGTTTTCCTTTATATGGAACACAGTTTTCTTGCA
                      ____________________________________________________________
consensus AAGTGCATAGAGAATTTGATAGATTTGGTTTTCCTTTATATGGAACACAGTTTTCTTGCA
 
. : . : . : . : . : . :
rJMFF032J01+ GATGATGAAATCCTAGGTTCTCTTCATCGGTATCGACCCGAGTTTCTGGTTAATTCAGAT
                      ____________________________________________________________
consensus GATGATGAAATCCTAGGTTCTCTTCATCGGTATCGACCCGAGTTTCTGGTTAATTCAGAT
 
. : . : . : . : . : . :
rJMFF032J01+ GGCCTGCCATCTTATTATTATGCAAACAATTTTCAGCATACATGTGATCTAATGTCTGAT
rJMFF050B13+ TGCAAACAATTTTCAGCATACATGTGATCTAATGTCTGAT
                      ____________________________________________________________
consensus GGCCTGCCATCTTATTATTATGCAAACAATTTTCAGCATACATGTGATCTAATGTCTGAT
 
. : . : . : . : . : . :
rJMFF032J01+ CAGTATGAGGATGCTGCTGGTGCATTAATTATTAACAAACTCCTTGAACAAGACCATGAA
rJMFF050B13+ CAGTATGAGGATGCTGCTGGTGCATTAATTATTAACAAACTCCTTGAACAAGACCATGAA
                      ____________________________________________________________
consensus CAGTATGAGGATGCTGCTGGTGCATTAATTATTAACAAACTCCTTGAACAAGACCATGAA
 
. : . : . : . : . : . :
rJMFF032J01+ ATATGGAAGTGCACTGCTGTGCCTTTTTTGGGTCAAAATGATTTTTTGGACAGTGAAGTG
rJMFF050B13+ ATATGGAAGTGCACTGCTGTGCCTTTTTTGGGTCAAAATGATTTTTTGGACAGTGAAGTG
                      ____________________________________________________________
consensus ATATGGAAGTGCACTGCTGTGCCTTTTTTGGGTCAAAATGATTTTTTGGACAGTGAAGTG
 
. : . : . : . : . : . :
rJMFF032J01+ GCTAAAAGTTTGGCAGCTGTGGTCAAAGAGGTTGAAAAGTTGGCTAGGGAGTGTTTCTTC
rJMFF050B13+ GCTAAAAGTTTGGCAGCTGTGGTCAAAGAGGTTGAAAAGTTGGCTAGGGAGTGTTTCTTC
                      ____________________________________________________________
consensus GCTAAAAGTTTGGCAGCTGTGGTCAAAGAGGTTGAAAAGTTGGCTAGGGAGTGTTTCTTC
 
. : . : . : . : . : . :
rJMFF032J01+ TTTCTCCGGGAGTCATTCCCTTTTGATGAAGAAAGTCTAGGGCAATTTTATGATGATGGT
rJMFF050B13+ TTTCTCCGGGAGTCATTCCCTTTTGATGAAGAAAGTCTAGGGCAATTTTATGATGATGGT
                      ____________________________________________________________
consensus TTTCTCCGGGAGTCATTCCCTTTTGATGAAGAAAGTCTAGGGCAATTTTATGATGATGGT
 
. : . : . : . : . : . :
rJMFF032J01+ GTTATCCCCAAAAGGCAAATGCAGCTGTCTGTGCCCATCTCCTATGTTTTCACGCTGCAT
rJMFF050B13+ GTTATCCCCAAAAGGCAAATGCAGCTGTCTGTGCCCATCTCCTATGTTTTCACGCTGCAT
                      ____________________________________________________________
consensus GTTATCCCCAAAAGGCAAATGCAGCTGTCTGTGCCCATCTCCTATGTTTTCACGCTGCAT
 
. : . : . : . : . : . :
rJMFF032J01+ ACTCCCACAATTGGGTCAGTTCGGTAGACACTAGTCATACAAACTAGAATGCTCACCTGT
rJMFF050B13+ ACTCCCACAATTGGGTCAGTTCGGTAGACACTAGTCATACAAACTAGAATGCTCACCTGT
                      ____________________________________________________________
consensus ACTCCCACAATTGGGTCAGTTCGGTAGACACTAGTCATACAAACTAGAATGCTCACCTGT
 
. : . : . : . : . : . :
rJMFF032J01+ CTAGTAATCATAGTGTAAAGACTGCTGGAAGTTTGGAAACACCTATGTGACCATTAAATT
rJMFF050B13+ CTAGTAATCATAGTGTAAAGACTGCTGGAAGTTTGGAAACACCTATGTGACCATTAAATT
                      ____________________________________________________________
consensus CTAGTAATCATAGTGTAAAGACTGCTGGAAGTTTGGAAACACCTATGTGACCATTAAATT
 
. : . : . : . : . : . :
rJMFF032J01+ CCTTTACAAACTTTAGGAGCTCAGCTTCTAATCTAATC
rJMFF050B13+ CCTTTACAAACTTTAGGAGCTCAGCTTCTAATCTAATCTATTTATATTTGGTATGCTTAT
                      ____________________________________________________________
consensus CCTTTACAAACTTTAGGAGCTCAGCTTCTAATCTAATCTATTTATATTTGGTATGCTTAT
 
. : . : . : . : . : . :
rJMFF050B13+ GCTCTGTAATTATTACTGGGGTTTCTGTTGTCATGCAATTATTTAGTCGGTTATCCATAG
                      ____________________________________________________________
consensus GCTCTGTAATTATTACTGGGGTTTCTGTTGTCATGCAATTATTTAGTCGGTTATCCATAG
 
. : . : . : . : . : . :
rJMFF050B13+ AAAAATAGTACTTCGTACCAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG
                      ____________________________________________________________
consensus AAAAATAGTACTTCGTACCAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG