Contig 013844:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF049B17Sequence648023775ref|XP_004250945.1|1e-66PREDICTED: dicarboxylate transporter 1, chloroplastic [Solanum lycopersicum]596013844 (2)ref|XP_006850217.1|2e-45hypothetical protein AMTR_s00022p00253280 [Amborella trichopoda] gb|ERN11798.1|
JMSF036G15Sequence687014714ref|XP_004250945.1|7e-75PREDICTED: dicarboxylate transporter 1, chloroplastic [Solanum lycopersicum]763013844 (2)ref|XP_009777235.1|1e-91PREDICTED: dicarboxylate transporter 1, chloroplastic [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMSF036G15+              TTGGTAGTAAGTTAAATGTTGATGCTGTTACTGCTGCAATACNTGGATTATCTGTC
                      ____________________________________________________________
consensus                 TTGGTAGTAAGTTAAATGTTGATGCTGTTACTGCTGCAATACNTGGATTATCTGTC
 
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rJMSF036G15+          CTCCTTGTGACTGGAGTTGTCACATGGAAGGAATGCTTAGCCGAAGCAGTTGCTTGGGAT
                      ____________________________________________________________
consensus             CTCCTTGTGACTGGAGTTGTCACATGGAAGGAATGCTTAGCCGAAGCAGTTGCTTGGGAT
 
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rJMSF036G15+          ACCCTGACTTGGTTTGCTGCACTCATTGCAATGGCTGGTTATCTCAACAAATATGGCCTT
                      ____________________________________________________________
consensus             ACCCTGACTTGGTTTGCTGCACTCATTGCAATGGCTGGTTATCTCAACAAATATGGCCTT
 
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rJMSF036G15+          ATCTCATGGTTTAGTGAGACTGTCGTTAAGGTTGTTGGGGGATTAGGCCTTTCATGGCAA
                      ____________________________________________________________
consensus             ATCTCATGGTTTAGTGAGACTGTCGTTAAGGTTGTTGGGGGATTAGGCCTTTCATGGCAA
 
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rJMSF036G15+          CTGTCTTTTGGCATTTTAGTTCTTCTCTACTTCTACTCTCACTACTTCTTTGCTAGTGGA
rJMFF049B17+              CTTTTGGCATNTTAGTTCTTCTCTACTTCTACTCTCACTACTTCTTTGCTAGTGGA
                      ____________________________________________________________
consensus             CTGTCTTTTGGCATTTTAGTTCTTCTCTACTTCTACTCTCACTACTTCTTTGCTAGTGGA
 
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rJMSF036G15+          GCTGCTCACATTGGAGCCATGTTCACAGCATTCTTGTCGGTAGCTAGCGCTCTAGGTACC
rJMFF049B17+          GCTGCTCACATGGGAGCCATGTTCACAGCATTCTTGTCGGTAGCTAGCGCTCTAGGTACC
                      ____________________________________________________________
consensus             GCTGCTCACATTGGAGCCATGTTCACAGCATTCTTGTCGGTAGCTAGCGCTCTAGGTACC
 
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rJMSF036G15+          CCGCCATACTTGGGAGCCTTGGTACTCGCCTTCCTCTCTAACATCATGGGTGGCCTCACA
rJMFF049B17+          CCGCCATACTTGGGAGCCTTGGTACTCGCCTTCCTCTCTAACATCATGGGTGGCCTCACA
                      ____________________________________________________________
consensus             CCGCCATACTTGGGAGCCTTGGTACTCGCCTTCCTCTCTAACATCATGGGTGGCCTCACA
 
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rJMSF036G15+          CACTACGGTATAGGATCAGCACCCGTGTTCTATGGTGCAAACTACGTTCCACTTGCAAAA
rJMFF049B17+          CACTACGGTATAGGATCAGCACCCGTGTTCTATGGTGCAAACTACGTTCCACTTGCAAAA
                      ____________________________________________________________
consensus             CACTACGGTATAGGATCAGCACCCGTGTTCTATGGTGCAAACTACGTTCCACTTGCAAAA
 
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rJMSF036G15+          TGGTGGGGCTATGGGTTCTTGATCTCTGTCGTTAATATCATTATCTGGCTTGGAGTGGGA
rJMFF049B17+          TGGTGGGGCTATGGGTTCTTGATCTCTGTCGTTAATATCATTATCTGGCTTGGAGTGGGA
                      ____________________________________________________________
consensus             TGGTGGGGCTATGGGTTCTTGATCTCTGTCGTTAATATCATTATCTGGCTTGGAGTGGGA
 
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rJMSF036G15+          GGAATTTGGTGGAAGGCGATCGGATTGTGGTAGAGCCAGCTTGGTAGCATGATATGCTCT
rJMFF049B17+          GGAATTTGGTGGAAGGCGATCGGATTGTGGTAGAGCCAGCTTGGTAGCATGATATGCTCT
                      ____________________________________________________________
consensus             GGAATTTGGTGGAAGGCGATCGGATTGTGGTAGAGCCAGCTTGGTAGCATGATATGCTCT
 
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rJMSF036G15+          ACCAACCTAGTTTTGGTGGTTATTCAAGATTAAGGATGTTTTGGTGACCCATTCATAGTT
rJMFF049B17+          ACCAACCTAGTTTTGGTGGTTATTCAAGATTAAGGATGTTTTGGTGACCCATTCATAGTT
                      ____________________________________________________________
consensus             ACCAACCTAGTTTTGGTGGTTATTCAAGATTAAGGATGTTTTGGTGACCCATTCATAGTT
 
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rJMSF036G15+          TTCATTAAGGAATAATACTTTGATGGACGGACATATCATATCATATAGTTGAGGATGGTA
rJMFF049B17+          TTCATTAAGGAATAATACTTTGATGGACGGACATATCATATCATATAGTTGAGGATGGTA
                      ____________________________________________________________
consensus             TTCATTAAGGAATAATACTTTGATGGACGGACATATCATATCATATAGTTGAGGATGGTA
 
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rJMSF036G15+          TACACAGCATTAGGTTCATTCATAGTTGAAGCTCAGGCTTGAGGCTT             
rJMFF049B17+          TACACAGCATTAGGTTCATTCATAGTTGAAGCTCAGGCTTGAGGCTTGTATGTTTACAAA
                      ____________________________________________________________
consensus             TACACAGCATTAGGTTCATTCATAGTTGAAGCTCAGGCTTGAGGCTTGTATGTTTACAAA
 
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rJMFF049B17+          TTTTGACACATAGTGGATCTTTATTTTTTGCCCAAAAAAAAAAAAAAAACTCTCCAGGGT
                      ____________________________________________________________
consensus             TTTTGACACATAGTGGATCTTTATTTTTTGCCCAAAAAAAAAAAAAAAACTCTCCAGGGT