| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF034J06 | Sequence | 501 | 012959 (4) | ref|XP_006360824.1| | 136 | PREDICTED: uncharacterized protein LOC102590367 [Solanum tuberosum] | 790 | 013834 (4) | ref|XP_009615562.1| | 379 | PREDICTED: uncharacterized protein LOC104108275 [Nicotiana tomentosiformis] |
| JMFF043K04 | Sequence | 640 | 012959 (4) | ref|XP_006360824.1| | 136 | PREDICTED: uncharacterized protein LOC102590367 [Solanum tuberosum] | 604 | 013834 (4) | ref|XP_009615562.1| | 258 | PREDICTED: uncharacterized protein LOC104108275 [Nicotiana tomentosiformis] |
| JMFF046P07 | Sequence | 582 | 012959 (4) | ref|XP_006360824.1| | 179 | PREDICTED: uncharacterized protein LOC102590367 [Solanum tuberosum] | 481 | 013834 (4) | gb|EYU41971.1| | 2e-57 | hypothetical protein MIMGU_mgv1a027046mg [Erythranthe guttata] |
| JMSF016D13 | Sequence | 372 | 012959 (4) | 790 | 013834 (4) | ref|XP_009615562.1| | 398 | PREDICTED: uncharacterized protein LOC104108275 [Nicotiana tomentosiformis] | |||
This contig is upended
. : . : . : . : . : . :
rJMSF016D13+ ATAGGGAACATAAAGTACTTAACNTCCATGGCTGATATCAGTTTCCAGCAGAGATAT
rJMFF034J06+ TGATATCAGTTTCAAGCAGAGATAT
____________________________________________________________
consensus ATAGGGAACATAAAGTACTTAACNTCCATGGCTGATATCAGTTTCCAGCAGAGATAT
. : . : . : . : . : . :
rJMSF016D13+ GTGTATGTTGATGTTGGATCAAGGAGCTATGGCTCCAGCATTGTGAGTTGGTTTAAGAAG
rJMFF034J06+ GTGTATGTTGATGTTGGATCAAGGAGCTATGGCTCCAGCATTGTGAGTTGGTTTAAGAAG
____________________________________________________________
consensus GTGTATGTTGATGTTGGATCAAGGAGCTATGGCTCCAGCATTGTGAGTTGGTTTAAGAAG
. : . : . : . : . : . :
rJMSF016D13+ CAATACCCGAAACAGAACAAAACCTTCGAGATTTATGCCATTGAGGCCGACAAGACATTC
rJMFF034J06+ CAATACCCGAANCAGAACAAAACCTTCGAGATTTATGCCATTGAGGCCGACAAGACATTC
____________________________________________________________
consensus CAATACCCGAAACAGAACAAAACCTTCGAGATTTATGCCATTGAGGCCGACAAGACATTC
. : . : . : . : . : . :
rJMSF016D13+ CATCAAGAGTACAAGATCAAGAAAGGTGTGACATTGCTGCCATATGCTGCTTGGGTGAAG
rJMFF034J06+ CATCAAGAGTACAAGATCAAGAAAGGTGTGACATTGCTGCCATATGCTGCTTGGGTGAAG
rJMFF043K04+ TGGGTGAAG
____________________________________________________________
consensus CATCAAGAGTACAAGATCAAGAAAGGTGTGACATTGCTGCCATATGCTGCTTGGGTGAAG
. : . : . : . : . : . :
rJMSF016D13+ AACGAGTCATTGTTCTTCGAGATTAACCAAACCCCGGGCGACAAAGATGTGGTGAAAGGG
rJMFF034J06+ AACGAGTCATTGTTCTTCGAGATTAACCAAACCCCGGGCGACAAAGATGTGGTGAAAGGG
rJMFF043K04+ AACGAGTCATTGTTCTTCGAGATTAACCAAACCCCGGGCGACAAAGATGTGGTGAAAGGG
____________________________________________________________
consensus AACGAGTCATTGTTCTTCGAGATTAACCAAACCCCGGGCGACAAAGATGTGGTGAAAGGG
. : . : . : . : . : . :
rJMSF016D13+ CGAGGAATGGGAAGAATTCAGCCGGCGGTTCAATCATCAGGCGACACCGTGAGCGATGTG
rJMFF034J06+ CGAGGAATGGGAAGAATTCAGCCGGCGGTTCAATCATCAGGCGACACCGTGAGCGATGTG
rJMFF043K04+ CGAGGAATGGGAAGAATTCAGCCGGCGGTTCAATCATCAGGCGACACCGTGAGCGATGTG
rJMFF046P07+ G
____________________________________________________________
consensus CGAGGAATGGGAAGAATTCAGCCGGCGGTTCAATCATCAGGCGACACCGTGAGCGATGTG
. : . : . : . : . : . :
rJMSF016D13+ GATAGGATACAAGCTTTCGACTTTGCTGAGTGGTTGAAGAGCGCAGTGAGTGAGAGGGAT
rJMFF034J06+ GATAGGATACAAGCTTTCGACTTTGCTGAGTGGTTGAAGAGCGCAGTGAGTGAGAGGGAT
rJMFF043K04+ GATAGGATACAAGCTTTCGACTTTGCTGAGTGGTTGAAGAGCGCAGTGAGTGAGAGGGAT
rJMFF046P07+ GATAGGATACAAGCTTTCGACTTTGCTGAGTGGTTGAAGAGCGCAGTGAGTGAGAGGGAT
____________________________________________________________
consensus GATAGGATACAAGCTTTCGACTTTGCTGAGTGGTTGAAGAGCGCAGTGAGTGAGAGGGAT
. : . : . : . : . : . :
rJMSF016D13+ TATGTTGTGATGAAGATGGATGTGGAAGGGACTGAATTCGATTTGATCCCGAGGTTGTTT
rJMFF034J06+ TATGTTGTGATGAAGATGGATGTGGAAGGGACTGAATTCGATTTGATCCCGAGGTTGTTT
rJMFF043K04+ TATGTTGTGATGAAGATGGATGTGGAAGGGACTGAATTCGATTTGATCCCGAGGTTGTTT
rJMFF046P07+ TATGTTGTGATGAAGATGGATGTGGAAGGGACTGAATTCGATTTGATCCCGAGGTTGTTT
____________________________________________________________
consensus TATGTTGTGATGAAGATGGATGTGGAAGGGACTGAATTCGATTTGATCCCGAGGTTGTTT
. : . : . : . : . : . :
rJMSF016D13+ GAGACGGGGGCAATTTGTCTGATCGATGAACTGTTTCTTGAATGCCATTACAACCGGTGG
rJMFF034J06+ GAGACGGGGGCAATTTGTCTGATCGATGAACTGTTTCTTGAATGCCATTACAACCGGTGG
rJMFF043K04+ GAGACGGGGGCAATTTGTCTGATCGATGAACTGTTTCTTGAATGCCATTACAACCGGTGG
rJMFF046P07+ GAGACGGGGGCAATTTGTCTGATCGATGAACTGTTTCTTGAATGCCATTACAACCGGTGG
____________________________________________________________
consensus GAGACGGGGGCAATTTGTCTGATCGATGAACTGTTTCTTGAATGCCATTACAACCGGTGG
. : . : . : . : . : . :
rJMSF016D13+ CAGAAATGCTGCCCCGGGGAGAGGAGTTCCAAGTATGAGAAAACCTATGGCCAGTGCATG
rJMFF034J06+ CAGAAATGCTGCCCCGGGGAGAGGAGTTCCAAGTATGAGAAAACCTATGGCCAGTGCATG
rJMFF043K04+ CAGAAATGCTGCCCCGGGGAGAGGAGTTCCAAGTATGAGAAAACCTATGGCCAGTGCATG
rJMFF046P07+ CAGAAATGCTGCCCCGGGGAGAGGAGTTCCAAGTATGAGAAAACCTATGGCCAGTGCATG
____________________________________________________________
consensus CAGAAATGCTGCCCCGGGGAGAGGAGTTCCAAGTATGAGAAAACCTATGGCCAGTGCATG
. : . : . : . : . : . :
rJMSF016D13+ GATGTGTTTACTTCTCTTAGAAAAAGCGGAGTTCTTGTTCATCAATGGTGGTGATTGATA
rJMFF034J06+ GATGTGTTTACTTCTCTTAGAAAAAGCGGAGTTCTTGTTCATCAATGGTGGTGATTGATA
rJMFF043K04+ GATGTGTTTACTTCTCTTAGAAAAAGCGGAGTTCTTGTTCATCAATGGTGGTGATTGATA
rJMFF046P07+ GATGTGTTTACTTCTCTTAGAAAAAGCGGAGTTCTTGTTCATCAATGGTGGTGATTGATA
____________________________________________________________
consensus GATGTGTTTACTTCTCTTAGAAAAAGCGGAGTTCTTGTTCATCAATGGTGGTGATTGATA
. : . : . : . : . : . :
rJMSF016D13+ GCAACCCGGAAACACTGTCTCTAACTTCACCTTCTTTAGTCTGCTGCCATTTTCCAGTTT
rJMFF034J06+ GCAACCCGGAAACACTGTCTCTAACTTCACCTTCTTTAGTCTGCTGCCATTTTCCAGTTT
rJMFF043K04+ GCAACCCGGAAACACTGTCTCTAACTTCACCTTCTTTAGTCTGCTGCCATTTTCCAGTTT
rJMFF046P07+ GCAACCCGGAAACACTGTCTCTAACTTCACCTTCTTTAGTCTGCTGCCATTTTCCAGTTT
____________________________________________________________
consensus GCAACCCGGAAACACTGTCTCTAACTTCACCTTCTTTAGTCTGCTGCCATTTTCCAGTTT
. : . : . : . : . : . :
rJMSF016D13+ ACACAAAGAAAATTATACCAGTTCTTTTTATTTAGATGCTACTTGTACTCTTTATTTCAT
rJMFF034J06+ ACACAAAGAAAATTATACCAGTTCTTTTTATTTAGATGCTACTTGTACTCTTTATTTCAT
rJMFF043K04+ ACACAAAGAAAATTATACCAGTTCTTTTTATTTAGATGCTACTTGTACTCTTTATTTCAT
rJMFF046P07+ ACACAAAGAAAATTATACCAGTTCTTTTTATTTAGATGCTACTTGTACTCTTTATTTCAT
____________________________________________________________
consensus ACACAAAGAAAATTATACCAGTTCTTTTTATTTAGATGCTACTTGTACTCTTTATTTCAT
. : . : . : . : . : . :
rJMSF016D13+ TTGTATGTATTTT
rJMFF034J06+ TTGTATGTATTTTTGTCTCTTTCAAAAGAAATCAATCTACAT
rJMFF043K04+ TTGTATGTATTTTTGTCTCTTTCAAAAGAAATCAATCTACAT
rJMFF046P07+ TTGTATGTATTTTTGTCTCTTTCAAAAGAAATCAATCTACATTCGAAGTCTTTACTTCCC
____________________________________________________________
consensus TTGTATGTATTTTTGTCTCTTTCAAAAGAAATCAATCTACATTCGAAGTCTTTACTTCCC