Contig 013830:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF025D21Sequence565000782 (5)ref|XP_011024933.1|5e-75PREDICTED: asparagine synthetase [glutamine-hydrolyzing] 1 isoform X1 [Populus 773013830 (4)ref|XP_009766230.1|9e-98PREDICTED: asparagine synthetase [glutamine-hydrolyzing] [Nicotiana sylvestris]
JMFF046K08Sequence546000782 (5)gb|KDO66936.1|3e-114hypothetical protein CISIN_1g007799mg [Citrus sinensis]557013830 (4)ref|XP_009616367.1|6e-34PREDICTED: asparagine synthetase [glutamine-hydrolyzing]-like [Nicotiana toment
JMSF027E02Sequence660000782 (5)ref|XP_011024933.1|2e-98PREDICTED: asparagine synthetase [glutamine-hydrolyzing] 1 isoform X1 [Populus 729013830 (4)ref|XP_009766230.1|2e-92PREDICTED: asparagine synthetase [glutamine-hydrolyzing] [Nicotiana sylvestris]
JMSF046L02Sequence696000782 (5)ref|XP_011024933.1|2e-106PREDICTED: asparagine synthetase [glutamine-hydrolyzing] 1 isoform X1 [Populus 820013830 (4)ref|XP_009766230.1|8e-113PREDICTED: asparagine synthetase [glutamine-hydrolyzing] [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF046L02+ GTTAGAAGCCCGAGTCCCT
                      ____________________________________________________________
consensus GTTAGAAGCCCGAGTCCCT
 
. : . : . : . : . : . :
rJMSF046L02+ TTTCTGGACAAGGAGTTCATCAATGTTGCCATGAACATTGACCCCGAATGGAAGATGATC
rJMFF025D21+ TGGAAGATGATC
                      ____________________________________________________________
consensus TTTCTGGACAAGGAGTTCATCAATGTTGCCATGAACATTGACCCCGAATGGAAGATGATC
 
. : . : . : . : . : . :
rJMSF046L02+ AAACCCGAGGAGGGGCGGATGGAGAAGTGGATTCTTAGAAGGGCTTTTGATGATGAAGAG
rJMSF027E02+ GGGCGGATGGAGAAGTGGATTCTTAGAAGGGCTTTTGATGATGAAGAG
rJMFF025D21+ AAACCCGAGGAGGGGCGGATGGAGAAGTGGATTCTTAGAAGGGCTTTTGATGATGAAGAG
                      ____________________________________________________________
consensus AAACCCGAGGAGGGGCGGATGGAGAAGTGGATTCTTAGAAGGGCTTTTGATGATGAAGAG
 
. : . : . : . : . : . :
rJMSF046L02+ CATCCCTACCTCCCAAAGCATATTCTGTACAGGCAGAAGGAACAATTCAGCGATTGCGTG
rJMSF027E02+ CATCCCTACCTCCCAAAGCATATTCTGTACAGGCAGAAGGAACAATTCAGCGATTGCGTG
rJMFF025D21+ CATCCCTACCTCCCAAAGCATATTCTGTACAGGCAGAAGGAACAATTCAGCGATGGCGTG
                      ____________________________________________________________
consensus CATCCCTACCTCCCAAAGCATATTCTGTACAGGCAGAAGGAACAATTCAGCGATTGCGTG
 
. : . : . : . : . : . :
rJMSF046L02+ GGGTATAGCTGGATCGATGGGCTGAAAGCTCACGCGGAGGAGCATGTGACCGACAAAATG
rJMSF027E02+ GGGTATAGCTGGATCGATGGGCTGAAAGCTCACGCGGAGGAGCATGTGACCGACAAAATG
rJMFF025D21+ GGGTATAGCTGGATCGATGGGCTGAAAGCTCACGCGGAGGAGCATGTGACCGACAAAATG
                      ____________________________________________________________
consensus GGGTATAGCTGGATCGATGGGCTGAAAGCTCACGCGGAGGAGCATGTGACCGACAAAATG
 
. : . : . : . : . : . :
rJMSF046L02+ ATGCTCAATGCTGCACATATCTTCCCTCACAACACCCCGACTTCCAAGGAAGGTTACTAT
rJMSF027E02+ ATGCTCAATGCTGCACATATCTTCCCTCACAACACCCCGACTTCCAAGGAAGGTTACTAT
rJMFF025D21+ ATGCTCAATGCTGCACATATCTTCCCTCACAACACCCCGACTTCCAAGGAAGGTTACTAT
rJMFF046K08+ TCCAAGGAAGGTTACTAT
                      ____________________________________________________________
consensus ATGCTCAATGCTGCACATATCTTCCCTCACAACACCCCGACTTCCAAGGAAGGTTACTAT
 
. : . : . : . : . : . :
rJMSF046L02+ TACAGAATGATCTTCGAGAGGTTCTTCCCACAGAACCCGGCTAGTCTTACTGTTCCAGGA
rJMSF027E02+ TACAGAATGATCTTCGAGAGGTTCTTCCCACAGAACCCGGCTAGTCTTACTGTTCCAGGA
rJMFF025D21+ TACAGAATGATCTTCGAGAGGTTCTTCCCACAGAACCCGGCTAGTCTTACTGTTCCAGGA
rJMFF046K08+ TACAGAATGATCTTCGAGA-GTTCTTCCCACAGAACCCGGCTAGTCTTACTGTTCCAGGA
                      ____________________________________________________________
consensus TACAGAATGATCTTCGAGAGGTTCTTCCCACAGAACCCGGCTAGTCTTACTGTTCCAGGA
 
. : . : . : . : . : . :
rJMSF046L02+ GGGGCCAGTGTGGCATGCTCCACAGCCAAGGCAGTGGAGTGGGATGCTTCTTGGTCCAAG
rJMSF027E02+ GGGGCCAGTGTGGCATGCTCCACAGCCAAGGCAGTGGAGTGGGATGCTTCTTGGTCCAAG
rJMFF025D21+ GGGGCCAGTGTGGCATGCTCCACAGCCAAGGCAGTGGAGTGGGATGCTTCTTGGTCCAAG
rJMFF046K08+ GGGGCCAGTGTGGCATGCTCCACAGCCAAGGCAGTGGAGTGGGATGCTTCTTGGTCCAAG
                      ____________________________________________________________
consensus GGGGCCAGTGTGGCATGCTCCACAGCCAAGGCAGTGGAGTGGGATGCTTCTTGGTCCAAG
 
. : . : . : . : . : . :
rJMSF046L02+ AATCTCGACCCGTCTGGCAGGGCTGCCATCGGGGTACATAATTCTGCATACGAGAACCAA
rJMSF027E02+ AATCTCGACCCGTCTGGCAGGGCTGCCATCGGGGTACATAATTCTGCATACGAGAACCAA
rJMFF025D21+ AATCTCGACCCGTCTGGCAGGGCTGCCATCGGGGTACATAATTCTGCATACGAGAACCAA
rJMFF046K08+ AATCTCGACCCGTCTGGCAGGGCTGCCATCGGGGTACATAATTCTGCATACGAGAACCAA
                      ____________________________________________________________
consensus AATCTCGACCCGTCTGGCAGGGCTGCCATCGGGGTACATAATTCTGCATACGAGAACCAA
 
. : . : . : . : . : . :
rJMSF046L02+ CGGGCTGGTAATGGGAATTTGGCGACGACCAAGATTATTGACAATGTGCCGAGGATGATG
rJMSF027E02+ CGGGCTGGTAATGGGAATTTGGCGACGACCAAGATTATTGACAATGTGCCGAGGATGATG
rJMFF025D21+ CGGGCTGGTAATGGGAATTTGGCGACGACCAAGATTATTGACAATGTGCCGAGGATGATG
rJMFF046K08+ CGGGCTGGTAATGGGAATTTGGCGACGACCAAGATTATTGACAATGTGCCGAGGATGATG
                      ____________________________________________________________
consensus CGGGCTGGTAATGGGAATTTGGCGACGACCAAGATTATTGACAATGTGCCGAGGATGATG
 
. : . : . : . : . : . :
rJMSF046L02+ GAAGTGACAGCGGCTACGGAGCTCACGATATGGAGCTAACATTGTTGGGAAGATTGTGTG
rJMSF027E02+ GAAGTGACAGCGGCTACGGAGCTCACGATATGGAGCTAACATTGTTGGGAAGATTGTGTG
rJMFF025D21+ GAAGTGACAGCGGCTACGGAGCTCACGATATGGAGCTAACATTGTTGGGAAGATTGTGTG
rJMFF046K08+ GAAGTGACAGCGGCTACGGAGCTCACGATATGGAGCTAACATTGTTGGGAAGATTGTGTG
                      ____________________________________________________________
consensus GAAGTGACAGCGGCTACGGAGCTCACGATATGGAGCTAACATTGTTGGGAAGATTGTGTG
 
. : . : . : . : . : . :
rJMSF046L02+ AGATGCTTTGGGGTCTCTTCTCCTTGTCTGTGGTTATATGTTGTAGAGGGTTTGCAGCCT
rJMSF027E02+ AGATGCTTTGGGGTCTCTTCTCCTTGTCTGTGGTTATATGTTGTAGAGGGTTTGCAGCCT
rJMFF025D21+ AGATGCTTTGGGGTCTCTTCTCCTTGTCTGTGGTTATATGTTGTAGAGGGTTTGCAGCCT
rJMFF046K08+ AGATGCTTTGGGGTCTCTTCTCCTTGTCTGTGGTTATATGTTGTAGAGGGTTTGCAGCCT
                      ____________________________________________________________
consensus AGATGCTTTGGGGTCTCTTCTCCTTGTCTGTGGTTATATGTTGTAGAGGGTTTGCAGCCT
 
. : . : . : . : . : . :
rJMSF046L02+ GTCTTTTAGATGTGGCTTATTAGGTTGTGTAAAATTATATTGTACCTTAAATAAGAGCAA
rJMSF027E02+ GTCTTTTAGATGTGGCTTATTAGGTTGTGTAAAATTATATTGTACCTTAAATAAGAGCAA
rJMFF025D21+ GTCTTTTAGATGTGGCTTATTAGGTTGTGTAAAATTATATTGTACCTTAAATAAGAGCAA
rJMFF046K08+ GTCTTTTAGATGTGGCTTATTAGGTTGTGTAAAATTATATTGTACCTTAAATAAGAGCAA
                      ____________________________________________________________
consensus GTCTTTTAGATGTGGCTTATTAGGTTGTGTAAAATTATATTGTACCTTAAATAAGAGCAA
 
. : . : . : . : . : . :
rJMSF046L02+ GAGATCTTACTATGATCTGTCTGTCTTGTTCCTCCAAACAGTTCAATTGGATCCTACTTT
rJMSF027E02+ GAGATCTTACTATGATCTGTCTGTCTTGTTCCTCCAAACAGTTCAATTGGATCCTACTTT
rJMFF025D21+ GAGATCTTACTATGATCTGTCTGTCTTGTTCCTCCAAACAGTTCAATTGGATCCTACTTT
rJMFF046K08+ GAGATCTTACTATGATCTGTCTGTCTTGTTCCTCCAAACAGTTCAATTGGATCCTACTTT
                      ____________________________________________________________
consensus GAGATCTTACTATGATCTGTCTGTCTTGTTCCTCCAAACAGTTCAATTGGATCCTACTTT
 
. : . : . : . : . : . :
rJMSF046L02+ GTACTGGTTTTAAGGCTTT
rJMSF027E02+ GTACTGGTTTTAAGGCTTT
rJMFF025D21+ GTACTGGTTTTAAGGCTTTTGTCACCATTGATAATGCATAT
rJMFF046K08+ GTACTGGTTTTAAGGCTTTTGTCACCATTGATAATGCATATATAGTTTTATCTTTCTGTC
                      ____________________________________________________________
consensus GTACTGGTTTTAAGGCTTTTGTCACCATTGATAATGCATATATAGTTTTATCTTTCTGTC