Contig 013806:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF013D22+           CTTGCCNAGATTCTTCATCTTAAAATGACTTATCAAGCTGAAGGTAGTTTGCTGTTTGG
                      ____________________________________________________________
consensus              CTTGCCNAGATTCTTCATCTTAAAATGACTTATCAAGCTGAAGGTAGTTTGCTGTTTGG
 
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rJMSF013D22+          ATTCAAGTTGCATCCTTCGTGTAGTGTTGAAACTGTTGCAGCTCTTATAAAGAGGGAAAC
rJMFF043F12+                                                CAGCTCTTATAAAGAGGGAAAC
                      ____________________________________________________________
consensus             ATTCAAGTTGCATCCTTCGTGTAGTGTTGAAACTGTTGCAGCTCTTATAAAGAGGGAAAC
 
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rJMSF013D22+          CNCAGAAAAGCAGCGCAAGGAGATGAATGGAGGCTTACTGGATCCAATGTTAGTTAATGC
rJMFF043F12+          CACAGAAAAGCAGCGCAAGGAGATGAATGGAGGCTTACTGGATCCAATGTTAGTTAATGC
                      ____________________________________________________________
consensus             CACAGAAAAGCAGCGCAAGGAGATGAATGGAGGCTTACTGGATCCAATGTTAGTTAATGC
 
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rJMSF013D22+          NAGAGAAAATTTAGATTTCAGACTCAGCTTTGACTGTGTAGACGCCGAGGAGTTACTGAC
rJMFF043F12+          AAGAGAAAATTTAGATTTCAGACTCAGCTTTGACTGTGTAGACGCCGAGGAGTTACTGAC
                      ____________________________________________________________
consensus             AAGAGAAAATTTAGATTTCAGACTCAGCTTTGACTGTGTAGACGCCGAGGAGTTACTGAC
 
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rJMSF013D22+          TATTACNCTGGAGGATTTAGAAGCTGGCCTCCGATTGTTATCTCAATAAGCGGTTGCTAG
rJMFF043F12+          TATTACACTGGAGGATTTAGAAGCTGGCCTCCGATTGTTATCTCAATAAGCGGTTGCTAG
                      ____________________________________________________________
consensus             TATTACACTGGAGGATTTAGAAGCTGGCCTCCGATTGTTATCTCAATAAGCGGTTGCTAG
 
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rJMSF013D22+          GCTGAGCAAATATCGGAAGCAAGTAGTAGAATAAAGTTCTCTCTAATTACAAGTAATGAA
rJMFF043F12+          GCTGAGCAAATATCGGAAGCAAGTAGTAGAATAAAGTTCTCTCTAATTACAAGTAATGAA
                      ____________________________________________________________
consensus             GCTGAGCAAATATCGGAAGCAAGTAGTAGAATAAAGTTCTCTCTAATTACAAGTAATGAA
 
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rJMSF013D22+          TAACNTCTGTTGTCTGNGGTATCAATTTCTGAAGAATCNTGGCTATCNTGGCTTATGGCG
rJMFF043F12+          TAACATCTGTTGTCTGTGGTATCAATTTCTGAAGAATCATGGCTATCATGGCTTATGGCG
                      ____________________________________________________________
consensus             TAACATCTGTTGTCTGTGGTATCAATTTCTGAAGAATCATGGCTATCATGGCTTATGGCG
 
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rJMSF013D22+          ATTTGGCAACGGATTGGCNGAATCTTGATCTTGGATCTCNCTTGNGCC-TTTTTTTTTTT
rJMFF035N08+                                                          TTTTTTTTTTTT
rJMSF001H06+                                                          TTTTTTTTTTTT
rJMFF043F12+          ATTTGGCAACGGATTGGCAGAATCTTGATCTTGGATCTCACTTGTGCCTTTTTTTTTTTT
                      ____________________________________________________________
consensus             ATTTGGCAACGGATTGGCAGAATCTTGATCTTGGATCTCACTTGTGCCTTTTTTTTTTTT
 
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rJMSF013D22+          AAAACCTTTGTGGTCATTATGATTGTTTGTTCTTTAAATTTACTTATGCCCTTTTAGAGT
rJMFF035N08+          AAAACCTTTGTGGTCATTATGATTGTTTGTTCTTTAAATTTACTTATGCCCTTTTAGAGT
rJMSF001H06+          AAAACCTTTGTGGTCATTATGATTGTTTGTTCTTTAAATTTACTTATGCCCTTTTAGAGT
rJMFF043F12+          AAAACCTTTGTGGTCATTATGATTGTTTGTTCTTTAAATTTACTTATGCCCTTTTAGAGT
                      ____________________________________________________________
consensus             AAAACCTTTGTGGTCATTATGATTGTTTGTTCTTTAAATTTACTTATGCCCTTTTAGAGT
 
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rJMSF013D22+          CTATACATTCTTTATGTGATAGGAGAAAATTCTTTGTGAGGGATGTTTATAGATTTATAG
rJMFF035N08+          CTATACATTCTTTATGTGATAGGAGAAAATTCTTTGTGAGGGATGTTTATAGATTTATAG
rJMSF001H06+          CTATACATTCTTTATGTGATAGGAGAAAATTCTTTGTGAGGGATGTTTATAGATTTATAG
rJMFF043F12+          CTATACATTCTTTATGTGATAGGAGAAAATTCTTTGTGAGGGATGTTTATAGATTTATAG
                      ____________________________________________________________
consensus             CTATACATTCTTTATGTGATAGGAGAAAATTCTTTGTGAGGGATGTTTATAGATTTATAG
 
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rJMSF013D22+          GAGAGTAGAATGGTGGAATGTATTCTATATTCTTTAATGACAATATTCTGTCTCTATATG
rJMFF035N08+          GAGAGTAGAATGGTGGAATGTATTCTATATTCTTTAATGACAATATTCTG          
rJMSF001H06+          GAGAGTAGAATGGTGGAATGTATTCTATATTCTTTAATGAC                   
rJMFF043F12+          GAGAGTAGAATGGTGGAATGTATTCTATATTCTTTAATGACAATATTCTGTCTCTATATG
                      ____________________________________________________________
consensus             GAGAGTAGAATGGTGGAATGTATTCTATATTCTTTAATGACAATATTCTGTCTCTATATG
 
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rJMSF013D22+          TAATTCAT                                                    
rJMFF043F12+          TAATTCATGAATTCCAACCTCTCCAGTTATTGGAAAAAAAAAAAAAAAACTCTCCAGGGT
                      ____________________________________________________________
consensus             TAATTCATGAATTCCAACCTCTCCAGTTATTGGAAAAAAAAAAAAAAAACTCTCCAGGGT